Scophthalmus maximus (turbot): 118317883
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Entry
118317883 CDS
T09850
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
118317883 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118317883 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
smau04131
]
118317883 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
smau03029
]
118317883 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smau04812
]
118317883 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118317883 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
118317883 (si:dkey-110c1.10)
Membrane trafficking [BR:
smau04131
]
Others
Actin-binding proteins
Myosins
118317883 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
smau03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
118317883 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
smau04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
118317883 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
Myosin_N
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
118317883
NCBI-ProteinID:
XP_035502868
LinkDB
All DBs
Position
13:16140077..16153767
Genome browser
AA seq
1659 aa
AA seq
DB search
MATLELYSKGASVWIPDPDAVWVSAQLLQDYAHGDKHLLLQLSNGKEIQYPVGSPPDLPP
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYEQLHIYGE
EVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGSGKTVSAKFTMRYFA
VVGGAAQQTSVEDRVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGAKMRT
YLLEKSRVVFQASAERNYHIFYQLCASRELPEMRCLKLDAPERFRYTSQGGEMQIPGADD
LSDLECTRNAFTVLGVQPHQQMELFRVLSAVLHLGNVNIQASGRSSDRSYIEADDRALAV
FSKLLGVEGPQMAHWLCHRRLAVGGEMLVKPRTGQQAAEARDALAKHIYGQLFTWTVQRL
NSALRTQRGQSRSFIGVLDIYGFETFDRNSFEQFCINYANEKLQQQFNRHVFHLEQEEYL
REELAWSRIEFIDNQLCINLIEGQLGLFDLLDEECRMPKGSDESWVRKLYDQHLSSKPQQ
HFQKPRMSNSAFIVLHFADTVQYECEGFLDKNRGTVFEELVNILKASQSELVAELFQQQD
VDVSTVANGSVRSGKRATREHRLTVGFQFRQSLQMLMDTLNSTTPHYVRCIKPNDLKEAF
IFDPKRTVQQLRACGVLETIRISAAGYPSRWTYEEFFSRYRVLLRGPQSQEQAQASCRRT
LPQVISDPDQYCFGKTKVFFRAGQVALLERLRAERLRVAAVTIQSRVRGWLSRIRYTRIL
WATVTIQRHCRGALARRLALTLRFTKAALVIQRTYRMVVVRRLFLIIRQATVTIQAFTRG
KLARRRYRQLVAERAAVLLQARVRGWLARQAYRRVRAAVVFMQCCVRRRAARRELLQLKT
EARSVERYRELNKGMEVKLMQLQLRADQEARESASMRETLCTEREAASSELEALRVRIQR
LEGQKHEKPQPCPDISEKEVEKRRRAQEKAAQEILQLTQELQTLQREKESFDKERQELSA
RLLEQEKAQEECVHQAVSQASAALRVELDEERRKHQGLLREFTRLEQRYDNLREMSLLTE
RTNGHRRTDSSLSLEPLSPSPTALSPQCLTPLSLSPFPSAFPSPEEVRRVTGTSPCLERR
LPFWSSETPMDALMEKMDVPKAVKMGGEDLALAYDAVRVANKFLESQLHNHRSQWEEEQE
ALRRQLRQTISGASSAAPRQELQELLEARELECVKLRRELKALRNTVSLRWRLTQDPPSA
LTPETLSCPSRPQSASVTGLLECRKRDETKLMKNLITDIRVDSALSLPPGLPASVLFLCV
RQADCSRDQAHARSLCSAAVTAVKAALKKHSNNTDMTSLWLKNACVLHDLLTQHSLKQTH
DSSDLVPLTTDLSDLIRALSDLCIQAYQQLLSITETHLQNIIVPALLETETIPGLSGSAM
KLGASRKRTASDPRTVAGVAPTMALVLRELGALHTALSHQALPTMLVEQAFQQLTYLISA
SVLNSLLLRKDMCCWTRGIQIRYNVSLLEEWLRSRDLQAGGAVAPLEPLIQAAQLLQTGK
KTEAEAKALVQTCTALSSQQIVKILTLYTPHSDLEERVTLNFIRTVQGLLKGRDGQPPQL
LMDVRRVFPVTFPDLPPAALRAEQLVIPDSLKISFLRRA
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atggcaacactagagttatacagcaagggagcaagtgtgtggatccctgatccagatgca
gtctgggtttcagcccagctcctccaggactacgctcatggagacaaacatctcctgctc
cagctctctaatggaaaagagattcagtatccagtgggctctcctcccgatctcccacca
ctggggaaccccgacatcctggagggggaaaacgacctaacggctctcagcttcctccac
gagcctgccgtgctgcacaacctgcgggttcgattcctggactacagcagcatctacacg
tactgcggtattgttttagtggccatcaatccctatgagcagctccacatctatggagag
gaggtaatagatgcctacagtggtcaggacatggccgacatggaacctcacatcttttca
gtggcagaggaagcctaccgcaccatgaccagggaggagaaaaaccagtccatcatcatc
agtggggagtctggctcggggaaaacggtctcagccaaattcacaatgcgatactttgct
gtggttggaggagcagcacagcagaccagcgtggaggacagagtcctggcttctaaccca
atcatggagtctattgggaatgctaaaaccactcgaaatgacaacagcagtcgttttggt
aaatacatcgagattggcttcggcaggaagggcgacatcattggggctaagatgaggacg
tatctactggagaagtcgagggtcgtcttccaggcatcggcagagagaaactaccacata
ttctaccagctgtgtgcctccagagagctgcctgagatgagatgcctcaaactggatgca
cctgagcgtttccgctacaccagccagggaggagagatgcagatacctggtgctgatgat
ctgtcagacctggagtgcactcgcaatgctttcaccgttctgggtgtgcagcctcaccag
cagatggagctcttcagggtcctgtcagctgtcctccacctgggaaatgtcaacatccaa
gccagtgggagaagttctgataggagttatattgaagcagacgaccgcgctctggctgtc
ttctccaagctgctcggagtcgaagggcctcagatggcccactggctgtgccatcgcagg
ctggctgtggggggagagatgctggtcaaacccagaaccgggcagcaggctgcagaagcc
agagacgcactggccaaacacatctacggccagttgttcacatggactgtccagagactc
aactctgccctgcgcacccagaggggacagtccagatccttcattggggtgctggatata
tatgggtttgagacctttgatcggaacagttttgagcagttctgtataaattatgcgaat
gaaaagctccagcagcagtttaacaggcatgtgttccacttggagcaggaggagtatctc
cgggaggagctggcctggagcaggattgagttcattgacaatcagctgtgcatcaacctc
atagagggacaactgggcctgtttgatctgttggatgaggaatgcaggatgcccaaaggc
tcagacgagagctgggtgcggaagctgtacgaccaacacctgagcagcaagccccagcag
cacttccagaaaccccgcatgtcaaacagcgccttcatcgttctgcacttcgctgacacg
gtgcagtatgaatgtgaaggctttttagacaagaatcgaggcacagtctttgaggagctt
gtaaacattcttaaagcgagtcagtcggagcttgtggccgagttgtttcagcagcaggac
gtggacgtgtccactgtggccaatggaagtgttcgctcggggaaaagggccaccagagaa
cacagactgaccgtgggcttccagttccgtcagtccttacagatgctgatggacaccctg
aacagcaccactccccactatgtccgctgcatcaaacccaacgacctcaaggaggctttt
atttttgacccgaagaggacagtgcagcagctgagagcctgtggggtgctggagacaatt
cgtatcagtgctgcaggttatccatccaggtggacgtatgaggagttcttcagcaggtac
cgtgtgcttctccgagggcctcagagtcaggagcaggcccaggcctcctgcagacggacc
ctgcctcaggtcatctcagacccggaccagtactgcttcggaaagaccaaagtatttttt
agggccggccaggtggctctcctggagcggctgagagccgagcggctgcgcgtggctgcg
gtgaccatccagagccgggtcagaggatggctgtcacggatcagatacaccaggatcctc
tgggcaactgtcaccatacagagacactgcagaggagctctggccagacgactggccctg
accctgcgcttcaccaaggctgccttagtgatccagaggacctaccgcatggtggtggtc
agacgcttgttcctcatcatccgccaggccactgtcaccatccaggccttcaccaggggc
aaactggctcgccgcagatacagacagttggtggcagagcgtgccgccgtgttgctccag
gcgagagtgcgtgggtggttggcgaggcaggcgtacaggcgagtgcgtgctgctgtggtg
ttcatgcagtgctgcgtgcgccgcagggccgccaggagagagctgctgcaactgaagacc
gaggcccgctcagtggagaggtacagagagctcaacaagggcatggaggtcaaactgatg
caactgcagttacgggctgaccaggaggccagagagagtgcttctatgagagagaccctg
tgcacagagcgagaggccgccagctctgagctggaggctctgagggtgaggatacagaga
ctggagggccagaagcatgagaaaccccagccctgcccagacatcagtgagaaggaggtg
gagaagaggaggagagcccaggagaaggctgcgcaggagatccttcagctcacgcaggag
ttacaaactctgcagagagaaaaggagagctttgacaaagaaagacaggaactctccgct
cgcctgctcgaacaagaaaaagctcaagaagaatgcgtccaccaggctgtgtctcaggcg
agtgcagctctgagggtggagctggacgaagagaggcggaagcaccagggactcctgaga
gagttcaccagactggagcagagatatgacaaccttcgagagatgagtttgctcactgag
cgcaccaatggccacagaaggaccgactccagtctgagcttggagcctctctctccctca
cccaccgcgctgtcaccccagtgtctcaccccactctccctgtcacccttcccatctgcc
ttcccctccccagaggaggtccgcagggtcaccgggacgtctccatgcctggagcggaga
ctcccattttggagctcagaaacaccgatggacgccttaatggagaagatggatgtgccc
aaagccgtgaagatgggaggagaggacctggcacttgcctacgatgccgtacgagtggcc
aacaagtttctggagagtcagctgcataaccatcgcagtcagtgggaggaggagcaggaa
gctctgaggcgccagctcagacaaacaatctctggtgcttcctctgccgcgccgcgacag
gagctgcaggagctgctggaggccagagaactggagtgtgtcaaactgaggcgagagctg
aaggcgctgagaaacacggtctcactcagatggcgcctcactcaagatccaccatcagcg
ttgaccccagagaccttgtcctgtccatcccgaccacagtcggcatcagtcaccggtttg
ctcgagtgtagaaagagagatgaaactaagctcatgaagaacctcatcacagacatccgt
gtggacagtgccctgtctctgcctcctggtctacctgccagcgtgcttttcctgtgcgtc
cgccaggccgactgcagccgggaccaagctcacgctcgctcgctctgcagcgctgctgtc
actgctgtgaaggccgctctgaagaaacatagcaacaatacagacatgacatctctgtgg
ctgaagaatgcttgtgtgttgcacgacctgttgacccagcactcgctgaaacagacccat
gattcaagtgatctggttccactgacgactgacctgagcgacctcatccgcgccctgagt
gacctctgtatccaggcctatcagcagctcctctccatcaccgagacacacctgcaaaac
atcatagtccccgccctgctggagaccgagaccatccccggtctctctggctcagcgatg
aagttgggagcatccaggaagcggacagcctcagacccccggactgtggctggtgttgct
cccactatggcgttggtgttgagggagctgggagccctccacaccgccctgtcccaccag
gctctgcccacgatgctggtggaacaggcctttcagcagctcacctacctcatctctgcc
tccgtgctgaacagcctgctgctgcggaaagacatgtgctgctggactcgtggcatacaa
atacgctacaacgtgagcctgttggaggagtggctgcgtagccgcgacctgcaggcaggg
ggcgctgtggctccactggagcctctcatccaggcggctcagctgctgcagacagggaag
aaaactgaggcggaggcaaaggcccttgttcagacctgcactgcgctgtccagccagcag
attgtaaagatcctcaccctctacactccccacagtgaccttgaagagagagtcacactg
aatttcatccgcaccgtccaggggcttctgaaaggacgtgatggtcagcctccgcagctc
ctgatggatgtgaggcgagtgtttcctgtcactttccccgacttgccccccgctgccctc
cgcgctgagcagttagtcatcccagactccctcaagatctcctttctacgccgagcctag
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integrated database retrieval system