KEGG   Scophthalmus maximus (turbot): 118318009
Entry
118318009         CDS       T09850                                 
Symbol
kdm4b
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:smau03036]
    118318009 (kdm4b)
Enzymes [BR:smau01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     118318009 (kdm4b)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     118318009 (kdm4b)
Chromosome and associated proteins [BR:smau03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    118318009 (kdm4b)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF4537 53-BP1_Tudor PHD_4 DUF7141 Tudor_5 SLX1_C
Other DBs
NCBI-GeneID: 118318009
NCBI-ProteinID: XP_035503146
LinkDB
Position
13:8787035..8825051
AA seq 1240 aa
MATDMPMDTVPAPHPVPASSPDPAPASPPALSSSSTQDQIPTQEPAIAETPHTAVSSEYD
AAPDPTPAQPSDPEMAPGLVPGSELPPTPLPQPLPPVSAKNPSCKIMTFRPTMEEFKDFA
KYIVYMESQGAHRAGLAKVIPPEGWKPRKSYDTIEDMVIPAPIMQVVTGQSGLFTQYNIQ
KKSMTVSEYRKLANSKKYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDEDIQEW
NIGRLNTLLDMVEQECGIVIEGVNTPYMYFGMWKTTFAWHTEDMDLYSINYLHFGQSKSW
YAIPPEHGKRLERLAQGFFPGSSQGCDAFLRHKMTLISPSILKKYSIPFDRITQNEGEFM
ITFPYGYHAGFNHGFNCAESTNFATLRWVDYGKMATQCTCRKDMVKISMDVFVRCLQPDR
YELWKQGKDSTVLDHLKSTELSCPELEQWKQNRVTFRENLLRRAMQKMKQFRRLKLEEVK
VLAEEGIELNAAEYQRQVEERDAQRRKEREERLAREAMMTLEAMEREEQEAAEAAAKAAE
TPALDAEEHEAKPQNLTEDGEKKKQKKPKKMSNVHNAITGFEEAFEQYASSGTTNSNTPV
VSPAEVGNPLTPRQSGIPSDNKLDVSDTKACYSKMKMPTEVKKSRRHPLTKPPTRSPLSV
VKQEPTGDEEPSSPMPLDDMKKQEHLWQNLSPNFLAEKAFNAAVAALQPHCAVCSLFCPY
NKPHKDGSVANDTPHASLPRHGSMTRPLVPEMCFCVGAGNTEPPPTNHHIGDDGTSLLLR
CSSCNMQAHASCYGVKPDSVGDSWMCSRCSAGAWTVECCLCNLRGGAFKTTIDNRWVHVI
CAIAVAEARFVNAIEREPVDVSAVPETRKNLKCVFCHGKNANPNRGACIQCSYENCATSF
HVTCAQIAGVIMKPADWPYVVSVTCHRHARVSAKSRTAPKGPQTSNLGQRVIGRNSDGWY
YHCTIIGMATQTFYEVNFDDGSYCDNLHPENILSHDCLRNGPPEAGELIVVSTPEGQILN
ASFIKQHTHKFYQVEFQDQSQLMLKHSEIHQLDQELPKRVRARLAILVPKEEEPSADEAQ
AAKRRCLPTGSAPPTETPMETTDLPTCPLSTAPVDTPVAAHDSISTQLTSQPLSQPGVTR
QDTPAPTAGVQVDAETPMDTSVSLTEALTESSLVSDPTLTPQTTPFQSTLNSDPLLSAPS
PPPPPQHMSDSYTPSSGYVSYMETLLHSHFPQDDGPGPLY
NT seq 3723 nt   +upstreamnt  +downstreamnt
atggctaccgacatgcccatggacacggtgccggctcctcaccctgtcccagcctcatcc
ccagacccggccccagcctcaccacccgccctcagctctagttccacccaagaccagatt
cccacccaggagccagcaatagctgaaaccccccacacagcggtgtcctcagaatacgat
gctgctccagatcccaccccagcccagccttctgacccagagatggccccaggacttgtt
ccaggttccgagctgcccccgacccctctgccgcaaccactgccaccagtcagtgccaag
aaccccagctgcaagatcatgaccttccggcccaccatggaagagtttaaagacttcgcc
aaatacatcgtctacatggagagccagggagctcaccgtgctggcctcgcaaaggtgatt
cccccggagggctggaagccgcggaaatcctacgacaccatcgaggacatggtgatccca
gctcccatcatgcaggtggtgacgggtcagtcgggtctgttcacccaatacaacatccag
aagaaatcaatgactgtgagcgagtaccgcaagctggccaacagcaagaagtactgtaca
cctcgccacaaagacttcgacgacctagagaggaaatactggaaaaacttgacatttgtg
tcacccatttatggtgcagatgtcagtggttccatctacgatgaggacatccaagagtgg
aatatcggccgtctcaacacgctgctggatatggtggagcaggagtgtggcatcgttatc
gagggcgtcaacactccatatatgtattttggcatgtggaagaccacatttgcctggcac
actgaggacatggacctctacagcatcaactacttgcactttggacagtccaaatcctgg
tatgccatcccacctgagcacggcaagaggctggagaggctggcacaaggattcttccct
ggcagttcccaaggctgtgacgccttccttcgccacaagatgacactgatatctccatcc
atcctaaagaaatacagcatcccctttgaccggataactcagaatgaaggggagtttatg
atcacctttccttatggttaccatgccggcttcaaccatggcttcaactgtgcagagtcc
acaaactttgccaccctgcgctgggtcgactacggcaagatggccacccagtgtacctgt
cgtaaggacatggtgaagatttccatggacgtgtttgtgcgctgcctgcagcccgatcgc
tacgagctgtggaagcagggcaaagactctacagtgttagatcatttgaagtccactgag
ctcagctgccccgaactggagcaatggaagcagaatcgcgtcaccttccgagaaaacctc
ctgcgaagggccatgcagaagatgaagcagttccgtcgtctaaagctggaggaggtgaag
gtgctggcagaggaaggcattgagctgaacgccgccgagtaccagcgccaggtggaggaa
cgtgatgctcagcggaggaaggagagggaagagcgtctagccagagaagccatgatgacc
ctggaggccatggagcgcgaggagcaggaggccgctgaggctgctgctaaagcagctgag
actccagccttagacgcagaagaacatgaggccaaaccacagaacctgactgaagacggt
gagaaaaagaagcagaaaaagccaaagaagatgtcaaatgtacacaacgccatcactgga
tttgaggaagcgtttgagcagtatgcttcatcgggcaccacgaattcaaatacccccgtg
gtcagtcctgcagaggtggggaaccctctaaccccaaggcagagtggcatcccgtcagac
aacaaactagatgtaagcgacaccaaggcatgctactccaagatgaagatgccaacggag
gtaaaaaagagtcggcgtcatcccctcaccaagccacccacacgctcccctctgtccgtc
gtcaagcaagagccgaccggtgacgaagagccgtcctcccccatgccactggacgacatg
aagaaacaggagcacctgtggcagaacctctcacccaacttcctggcagagaaggccttc
aatgctgcagtcgcggcactccaaccacactgtgctgtctgctcgctcttctgcccctac
aataagccacacaaagatgggtccgttgcgaacgacaccccgcatgcctccctgccccgg
cacggcagtatgactcgtccactggtcccagagatgtgcttctgcgttggggcaggaaac
acagaacctccacccaccaaccatcacatcggagacgatggcaccagtcttctgctccgc
tgctcatcttgcaacatgcaggctcatgccagttgttacggtgtaaagccagactctgtc
ggtgattcctggatgtgctccagatgttcagcaggagcctggacagtggagtgttgtctc
tgcaacttgcgtggaggagctttcaagaccaccatagataaccggtgggtccacgtcatc
tgtgccatcgctgtggctgaagctcgctttgtcaacgccattgaaagggagccagtagac
gtcagcgctgttccagaaacgcgcaagaatctgaagtgtgtgttctgccacggcaagaac
gccaatccgaaccgcggtgcctgtatccagtgctcgtatgagaactgtgccacctccttc
cacgtcacctgcgcccaaattgccggtgtcatcatgaagcccgccgactggccctacgtg
gtgtccgtcacctgccacaggcacgcacgggtctctgcgaagtcgcggacagcacccaaa
ggcccacagacttcgaacctgggccagagagtgatcggccgcaacagtgacggctggtac
taccactgcaccattatcggcatggcaacgcagacattctatgaggtcaactttgatgat
gggtcatactgtgacaatctgcacccagaaaacatattgagtcacgactgcctgcgtaac
ggtcctccagaagccggggagttgattgtggtcagcacgccagagggtcagatcctcaac
gcgtccttcatcaaacagcacactcacaagttctaccaggttgagtttcaggaccagagt
cagctgatgctgaaacactcggagatccatcagctggaccaggaactgcccaagagggtc
cgagcccgattggcgatactcgtacccaaggaggaggaaccctcagcagatgaagcccaa
gcagcgaaacgccgctgccttcccactggctcagccccgcccaccgagacgcctatggaa
acgaccgatctgccaacttgccccctatctacagccccggtagacacgccagtagcagca
catgacagtattagcacacagctgacctcacaacctctgtcccagcccggcgtgacccga
caggacaccccagccccaaccgccggtgttcaggtggacgccgagaccccgatggacacg
agtgtctccctcacggaagccctcacagagtcgtccctggtctcggaccccacgctgact
ccacagacgaccccctttcagtcgacattgaactcggaccccctcctctccgctccgtcc
cctcccccgccgccccagcacatgtccgacagctacacgccgagcagcggctacgtttcc
tacatggagactctcctgcattcacatttccctcaggacgacgggcccgggcccctctat
taa

DBGET integrated database retrieval system