KEGG   Scophthalmus maximus (turbot): 118318178
Entry
118318178         CDS       T09850                                 
Symbol
uba52
Name
(RefSeq) ubiquitin-60S ribosomal protein L40 isoform X1
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03010  Ribosome
smau04120  Ubiquitin mediated proteolysis
smau04137  Mitophagy - animal
smau04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    118318178 (uba52)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    118318178 (uba52)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    118318178 (uba52)
   04137 Mitophagy - animal
    118318178 (uba52)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:smau03011]
    118318178 (uba52)
   04121 Ubiquitin system [BR:smau04121]
    118318178 (uba52)
Ribosome [BR:smau03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    118318178 (uba52)
  Archaea
    118318178 (uba52)
Ubiquitin system [BR:smau04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   118318178 (uba52)
SSDB
Motif
Pfam: ubiquitin Ribosomal_L40e Rad60-SLD Ubiquitin_2 Rad60-SLD_2 DUF2604 TBK1_ULD Ubiquitin_5 zf-C4pol OTU1_UBXL Dsc3_N UBL_UBAC1
Other DBs
NCBI-GeneID: 118318178
NCBI-ProteinID: XP_035503459
UniProt: A0A6A4TFF8
LinkDB
Position
13:8065895..8068250
AA seq 128 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq 387 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagacgttgacggggaagaccatcaccctcgaggtggagcccagc
gacacgatcgaaaatgtcaaggctaagatccaggacaaggaaggaattccccctgatcag
cagcgtctgatcttcgctggcaaacagctggaagatggacgcacactgtcagactacaac
atccagaaagaatccactctgcatctggttctgcgtctgcgtggtggcatcattgagccc
tcactgagacagctggcccagaaatacaactgcgacaagatgatctgccgcaaatgctat
gcccgtctgcacccacgtgctgtcaactgccgcaagaagaagtgtggacacaccaacaac
cttcgccccaagaagaagctgaagtag

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