Scophthalmus maximus (turbot): 118318325
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Entry
118318325 CDS
T09850
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118318325 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
smau03310
]
118318325 (rorca)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118318325 (rorca)
Nuclear receptors [BR:
smau03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118318325 (rorca)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118318325
NCBI-ProteinID:
XP_035503748
UniProt:
A0A2U9C373
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Position
13:complement(15320104..15350286)
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AA seq
486 aa
AA seq
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MTRRVDQDPTADMRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSR
QRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQSQERAS
IGARDENGDMAELSCPYRRSSSTTLSDLDDITQMPEGLLFDLPLTPEDAGGDYCNLDMLG
GSGGSSSSSQSSPEQTNLDFVDNSHSIKHEYQLLQDSGLFSHAILNPLPGGCSLLEIERI
TQSVVKSHLETSQYSTDELKRMAWTLYSQEETRSCQTKSAEVMWQQCAIHITNAIQYVVE
FAKRITGFMDLCQNDQIILLKSGCMDVLLIRMCRAYNPINNTLLFDGKFATAHLFKALGC
DDLVGSVFDFAKSLSRIQMSEEDMALFSAAVLLSPDRPWLTDVQKIQKLQDRVYVALQCC
LQKEGASEEKLAKMVSKLPIMKSICNLHIDKLEFFRLVHPETAYTFPPLYREVFGSEITF
PDSTEG
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgactcgaagagtcgaccaggaccccaccgccgacatgagagctcaaatagaggtgatt
ccctgtaaaatctgtggggacaaatcatcagggattcactatggtgtcatcacctgtgaa
ggctgcaagggcttcttccgacgcagccagcagaacaatgctatgtactcgtgctcacga
cagagaaactgtctaattgaccggaccaaccgtaaccgctgccagcactgcaggttgcag
aagtgtctcgctcttggcatgagccgtgatgccgtgaagttcggccgaatgtccaaaaaa
cagcgcgacagcctgtatgcagaggtccagaagcaccagcagtcccaggagcgtgcaagc
atcggtgcccgtgatgagaatggcgacatggccgaactcagctgcccctacagaagaagc
tccagcactacgctcagtgatctggatgacattacccagatgccagaaggcctactattc
gacctgccgctgacccccgaggatgcaggtggagactactgtaacctggacatgctgggt
ggcagtggaggcagcagctcgtcctctcagagttcaccggaacagaccaacttggacttt
gtagacaacagccacagcatcaagcacgagtaccagctgttgcaagactctggactcttc
tcacatgccatcctcaacccactgcccgggggctgctcgctgcttgagatcgagcgtata
actcagagtgtggtcaagtcacatcttgagacgagccagtacagcacagacgagctgaag
agaatggcgtggaccttgtatagccaagaagagacacggtcatgccagaccaagtcagct
gaggtgatgtggcaacaatgtgccattcacatcaccaatgcaatccagtatgtggtagag
tttgccaagcgcatcactggcttcatggacctgtgtcagaacgatcagattatcctcctc
aaatcaggctgcatggatgttcttctgatccgtatgtgtcgggcctacaaccccatcaac
aatacattgctcttcgatggaaagtttgccactgctcaccttttcaaagctctcggctgt
gacgaccttgtgggctcagtgtttgacttcgctaaaagcctgagtcgtatacagatgtcc
gaggaagacatggctcttttcagtgctgctgtgctgctctcaccagaccgaccctggctc
acagatgtccaaaagattcagaagttgcaggacagagtctacgtggctctgcagtgctgt
ctacaaaaagagggagcatcagaggagaaactagctaagatggtttccaagcttcccata
atgaagtccatttgcaaccttcacatcgacaaactggagtttttccgtctggtgcaccct
gagacagcatacacgtttcctcctctgtacagggaggtgtttggcagtgaaatcaccttc
ccagactctacagagggctaa
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