KEGG   Scophthalmus maximus (turbot): 118318344
Entry
118318344         CDS       T09850                                 
Symbol
her6
Name
(RefSeq) hairy-related 6 isoform X1
  KO
K06054  hairy and enhancer of split 1
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03460  Fanconi anemia pathway
smau04330  Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    118318344 (her6)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    118318344 (her6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:smau03000]
    118318344 (her6)
   03400 DNA repair and recombination proteins [BR:smau03400]
    118318344 (her6)
Transcription factors [BR:smau03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Hairy, Hairy/E(SPL)
    118318344 (her6)
DNA repair and recombination proteins [BR:smau03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    FA core complex binding factors
     118318344 (her6)
SSDB
Motif
Pfam: Hairy_orange HLH bHLH_NCOA Spectrin_1st_PEPL
Other DBs
NCBI-GeneID: 118318344
NCBI-ProteinID: XP_035503782
LinkDB
Position
13:complement(10797234..10799546)
AA seq 281 aa
MPADIMEKTSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMNYPSQHQHQHQHQHQLPPAAGPTHPSF
GQSMVQIPSASPQVLPMNAVSCKGGSSPPSLPSDATKVYGGFQIVPATDGQFAFLIPNAA
FAPNGPVIPVYANNVNTPVPVPAAVSPGAPSGNADSVWRPW
NT seq 846 nt   +upstreamnt  +downstreamnt
atgcctgccgatataatggaaaagacctcctcgtccccggtcgccgcgaccccggcgagc
atgaacacaactcccgacaaacccaagacagcctctgaacacagaaagtcatccaagcca
attatggaaaagaggagaagagcccgaatcaacgagagtttggggcagctgaaaactctc
atcctggatgcgctcaaaaaagatagctccagacactccaagttggagaaggcggacatc
ctggagatgacggtgaagcatctccggaacctccaaagggctcagatgaccgcagccctg
aacacagacccgaccgtcttggggaaataccgtgccggtttcagcgagtgcatgaacgaa
gtcacccggttcctgtccacctgcgaaggtgtcaacaccgaggtcaggacgcggctgctc
ggccacctggccaactgcatgacccagatcaacgccatgaactaccccagccagcatcag
caccagcaccagcaccagcaccagctcccgcccgccgccggcccaacgcacccgtcgttc
ggccagtccatggtgcagatccccagcgcgtccccgcaggtcctgcccatgaacgcggtg
tcctgcaaaggaggctcgtcgcctccgagtttaccgtcggacgccaccaaagtgtacggc
ggcttccagatcgtgcctgccacagacggacagttcgcgttcctcatacccaacgcggcg
ttcgcgcccaacgggcccgtcatccccgtgtacgccaacaacgtcaacacgccggtcccg
gtgccggccgcggtgtcccccggggccccgtcgggcaacgcggactcagtgtggcggccc
tggtga

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