Scophthalmus maximus (turbot): 118318344
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Entry
118318344 CDS
T09850
Symbol
her6
Name
(RefSeq) hairy-related 6 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03460
Fanconi anemia pathway
smau04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
118318344 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
118318344 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118318344 (her6)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118318344 (her6)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
118318344 (her6)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
118318344 (her6)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NCOA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
118318344
NCBI-ProteinID:
XP_035503782
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Position
13:complement(10797234..10799546)
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AA seq
281 aa
AA seq
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MPADIMEKTSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMNYPSQHQHQHQHQHQLPPAAGPTHPSF
GQSMVQIPSASPQVLPMNAVSCKGGSSPPSLPSDATKVYGGFQIVPATDGQFAFLIPNAA
FAPNGPVIPVYANNVNTPVPVPAAVSPGAPSGNADSVWRPW
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgcctgccgatataatggaaaagacctcctcgtccccggtcgccgcgaccccggcgagc
atgaacacaactcccgacaaacccaagacagcctctgaacacagaaagtcatccaagcca
attatggaaaagaggagaagagcccgaatcaacgagagtttggggcagctgaaaactctc
atcctggatgcgctcaaaaaagatagctccagacactccaagttggagaaggcggacatc
ctggagatgacggtgaagcatctccggaacctccaaagggctcagatgaccgcagccctg
aacacagacccgaccgtcttggggaaataccgtgccggtttcagcgagtgcatgaacgaa
gtcacccggttcctgtccacctgcgaaggtgtcaacaccgaggtcaggacgcggctgctc
ggccacctggccaactgcatgacccagatcaacgccatgaactaccccagccagcatcag
caccagcaccagcaccagcaccagctcccgcccgccgccggcccaacgcacccgtcgttc
ggccagtccatggtgcagatccccagcgcgtccccgcaggtcctgcccatgaacgcggtg
tcctgcaaaggaggctcgtcgcctccgagtttaccgtcggacgccaccaaagtgtacggc
ggcttccagatcgtgcctgccacagacggacagttcgcgttcctcatacccaacgcggcg
ttcgcgcccaacgggcccgtcatccccgtgtacgccaacaacgtcaacacgccggtcccg
gtgccggccgcggtgtcccccggggccccgtcgggcaacgcggactcagtgtggcggccc
tggtga
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