Scophthalmus maximus (turbot): 118318352
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Entry
118318352 CDS
T09850
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03030
DNA replication
smau03410
Base excision repair
smau03420
Nucleotide excision repair
smau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118318352 (rfc4)
03410 Base excision repair
118318352 (rfc4)
03420 Nucleotide excision repair
118318352 (rfc4)
03430 Mismatch repair
118318352 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smau03032
]
118318352 (rfc4)
03036 Chromosome and associated proteins [BR:
smau03036
]
118318352 (rfc4)
03400 DNA repair and recombination proteins [BR:
smau03400
]
118318352 (rfc4)
DNA replication proteins [BR:
smau03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
118318352 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
118318352 (rfc4)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
118318352 (rfc4)
DNA repair and recombination proteins [BR:
smau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
118318352 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
118318352 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_16
AAA_22
AAA_11
AAA_30
AAA_24
DUF815
Mg_chelatase
SLFN-g3_helicase
RuvB_N
AAA_19
AAA_14
AAA_28
Cdc6_lid
Gp44_lid
ResIII
AAA_5
AAA_7
Motif
Other DBs
NCBI-GeneID:
118318352
NCBI-ProteinID:
XP_035503813
UniProt:
A0A2U9C5U3
LinkDB
All DBs
Position
13:complement(24724674..24734148)
Genome browser
AA seq
358 aa
AA seq
DB search
MQAFLKGATIQSARPQKDKAAAGPSAEKKAKAIPWVEKYRPKSVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRKRVLELNASDERGIQVVREKVKN
FAQLTVAGTRPDGKPCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLAICDKETLKYTKESIAALVRVSEGDLRKAITFL
QSAARLSVEKEITEHAVIEIAGVVPPRMIDNLLQICFKGTFEKLEVAIRNMVDEGYAAIQ
ILSQLHESIIEQDLSDKQKSAITEKMAVVGKCLSDGADEYLQMLSLCSVIMQQSSKNN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttttgaaaggagcaaccattcagtctgccagaccccagaaagacaaggca
gcagcggggccaagtgctgagaagaaagccaaggctattccttgggtagaaaaatacagg
cctaagtctgttgatgaggtggcttttcaggaggaggtggtggcagtgctgaagaagtcg
ctggaaggagcagatcttcccaacttgcttttctatggccctcctggaacaggaaagacc
tctaccatcttagctgctgccagagaactttatggtccagagctgtacagaaagcgggtg
ctggagctcaacgcctccgatgagcgaggcatccaggttgtcagagagaaggttaagaat
tttgctcagctcaccgtagctgggactcggccagatgggaagccatgtcctccttttaag
atcatcatcctggatgaggcagactccatgacagcaccggcccaagccgctcttagacgg
accatggagaaggaatcgcgcaccacccgcttctgcctcatctgtaactacattagcagg
attattgagcctctgacctccaggtgttctaagtttcgtttcaaacctctagccaaccag
atccaagaagagcgtcttctggcaatctgtgataaggagaccctcaagtacaccaaagag
agtatagcagcattggtgagggtgtctgagggagacctgcggaaagcaatcaccttcctc
cagagcgctgcgcgcctcagtgtcgagaaagagatcacagagcatgctgtcattgaaata
gctggggtcgtccctcccaggatgattgacaacttgctccagatctgcttcaaaggaaca
tttgagaaactagaggtcgccatcaggaacatggtggatgaaggctatgcagccatacag
atcctgagtcagctacatgagtctatcatagagcaggacctgagcgacaagcagaagtca
gctatcacagagaagatggcggttgtgggtaagtgcctgtcagatggtgcagatgagtac
ctgcagatgctgagtctctgttcagtcatcatgcaacagtcgtccaagaacaactaa
DBGET
integrated database retrieval system
