Scophthalmus maximus (turbot): 118318421
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Entry
118318421 CDS
T09850
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
118318421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
smau03021
]
118318421
03036 Chromosome and associated proteins [BR:
smau03036
]
118318421
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
118318421
Coactivators
SAGA/TFTC/STAGA complex
118318421
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
118318421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
RVT_1
Motif
Other DBs
NCBI-GeneID:
118318421
NCBI-ProteinID:
XP_035503952
UniProt:
A0A8D3C0Z6
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All DBs
Position
7:786645..814612
Genome browser
AA seq
788 aa
AA seq
DB search
MATFKLESCGAAGEGNASIKVHTLHVPAQGGPIAAVQHPPTAASVSSSVSACGPSKVIAT
GQGRQPTSSTLVVAKVATPGGMSANGQRQVTKPALSQVAYMNQATTTGRTVVITVPRTAA
PQPVAVAPQVPQTASSHLPANIQIPSGMVLIRSDSGQLMLISQQALAKAQQAPRVASGQA
PRILSHQVSAASESKSNEKVTVIRMAAPPSFVSTPIQKTAVVKVFGVAPKPAVGQTQNTA
SAQKGQSRNQAADTQTQKTPLTTFSQETLESVRKCKNFLVTLIKLASSDTRTANMANNVR
GLVRILLEGKLEAEEFTERLYHELKSTPQPCLVPFLKKSLPAVRCLTADPQLFILQASTF
ACNPNTLSPTMKQSIIDTGQNLNTNKQVIQPTQRVILRPGLTTLAQSRNYMSKSSRPNLE
HTVLQSGKHLTETFSKKQSVTQFKDSGSYKDDDDDINDVAFMAGVNVREENAQILTTVVG
SVVQSCQDQAFLSSNPLLSRILHTGQALGVNEVSPEVVALVSHATQECLRGLLERLIVIA
EHRKAALKDNLWCSKVSDVRSQLHFLEEVEALNKKRKDEEEREKLLCLARGRSHNEDPQF
QQLKQRVKELQQRENAQLQQREANQTALAAIGPRRKRPVEQTEYQDKVETRILHDCKKAA
ECCEANHQGTRDCVSDTVVCSTGAPQGTVLAPFLLTLYTADFMYSTATRHLQKFSDDSAI
VGFITDDDDREFRELTQDFVDWCQWNCLQINAGKTKELVVDFHKRSQPPTTPVNIQGKDI
ERVDWVFT
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggccaccttcaagctggagtcctgtggggcagcaggggaaggaaatgcctccattaaa
gtccacacattacacgtaccagctcaaggtggacccatcgctgctgtacagcacccacca
actgctgcatctgtctcaagtagtgtttctgcctgtggcccatctaaagtcatcgccact
ggccagggccgccaacctacatcctctacattggtggtagctaaggtagccaccccagga
ggaatgagtgctaatggccaacgacaggtaacgaaaccagctctgagccaggtggcctac
atgaaccaggccacaaccacaggaaggacagtggtaataactgtgcccaggacagcagct
ccacagccagtcgctgtggcccctcaagtgccacagactgcttcctcacatctccctgcc
aatatccagataccatcaggtatggtgttgatccggagtgacagtggacaactgatgctc
atatcccagcaggctttggcaaaggctcagcaggcaccaagagttgccagtggtcaagca
ccgagaattttgtcgcatcaggtgtctgcagcatctgaaagtaaaagtaatgagaaggtg
accgtgatcaggatggcagcacctcctagtttcgtgtcaacacccatccagaagacagct
gtggtaaaggtttttggtgtcgctcccaaaccagctgtgggtcaaacccagaatactgct
tcagcgcagaaaggccagtctcgcaatcaggctgcagacacacaaacccagaagacgcct
ctgaccacattcagtcaggagaccctggaaagtgtgagaaagtgcaagaacttcctggta
actctgataaagctggcctccagtgacaccaggactgccaacatggctaacaatgtcagg
ggactggtcaggattctgctggaagggaagcttgaagcagaggagttcacagaacggctc
tatcacgagttgaagtcaactccacaaccgtgcttggtgcctttcctcaagaaaagtctt
cctgcagtccgttgcctcactgcagacccccagttatttattctgcaggcctcaactttt
gcttgcaaccccaacaccctgtctcctaccatgaagcagtcgatcattgacacaggacaa
aacctaaacaccaacaagcaggttattcagccaactcaaagagtgattctgagaccgggg
ttgaccacattagcccagtccagaaattacatgtctaagagcagcagacctaacctagag
cacacagtgctccagtctggaaaacacttgacagaaactttttcaaagaagcagtctgtc
actcagttcaaggactcaggatcatacaaagatgatgatgatgacattaatgatgtagcc
ttcatggctggagtaaacgtgagggaggagaatgctcagatcctgaccactgtggttggc
tctgtggtgcagtcatgccaggatcaggccttcctctcatcaaacccactactgagccgg
atccttcatacaggacaggcactgggagtaaatgaggtcagtccagaggtggttgctctg
gtttctcatgccactcaggagtgtctccgtggacttttggagaggctcattgtgattgca
gaacaccgcaaggccgccctgaaggacaacctgtggtgttccaaagtgagtgatgtgcgc
tctcagcttcactttcttgaggaagtggaggctttgaacaagaagaggaaagatgaagag
gaaagagagaaactgctgtgtttggccagaggtcgctcacacaacgaggatccacagttt
cagcagctcaagcaaagagtcaaagagttacaacagagagaaaatgctcagctgcagcag
agagaggccaaccagacagcccttgctgccatcgggcctcgcaggaagagacctgtggag
cagactgagtatcaggacaaggtggagactaggattttacatgactgcaaaaaggcagca
gaatgttgtgaggcaaaccatcaagggacaagggactgtgtctctgatacagtggtctgc
agcacaggagctccacagggaacagtcttggctcctttcctgttaaccctgtacactgca
gacttcatgtacagcacagccacccgccatctgcagaagttctctgacgactctgccatc
gttggcttcatcacagatgacgatgacagggagttcagagaactgactcaggactttgtg
gactggtgccagtggaactgcctccagatcaacgctgggaaaaccaaggagctggtggtg
gatttccacaagcgcagtcagccccccacaacaccagtgaacatccagggaaaggacatt
gagagagtggactgggtgttcacctga
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