Scophthalmus maximus (turbot): 118318537
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Entry
118318537 CDS
T09850
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04810
Regulation of actin cytoskeleton
smau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118318537 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118318537 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118318537 (cyfip1)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118318537 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
118318537 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Motif
Other DBs
NCBI-GeneID:
118318537
NCBI-ProteinID:
XP_035504204
LinkDB
All DBs
Position
13:19978176..20004531
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AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSIMYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQGYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHIERRKDFVSEAYLMTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYEELLAD
IVNLCIDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNSSNIYKLDTKKRINLSKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCISISSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLALQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YTALQDFAQVSLRDPLRQAIKKKKNVVQSVLQAIRKTVCDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIDMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSAHYALTKFNKQFLYDEIEAEVNLCFDQFVYKLADQIFGYYKILAGS
LLLDKRLRADCKNQGANIPWPASNRYETLLKQRHVQLLGRSIDLNRLITQRISAALSKSL
ELAINRFESEDLTSIMELEGLLDINRMTHKLLSKFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTILPFSQEFQRDKPPNAQPQYLYGSKTLNLAYSS
VFSCYRNFLGPPHIKVMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYTALHMVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRAFLEDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIIALLGQQRRFDVLDFSYHLLKVQKHDGKDEVIKSVP
LKKMVERIRKFQVLNNEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggtgaccttagaggatgcactctccaatgtggacctgctggaggaactg
ccactccccgaccagcagccatgcatcgagcccctcccctcctcgatcatgtatcagccc
aacttcaacaccaatttcgaggaccggaacgccttcgtcactggcatcgccagatacatc
gagcaggccaccgtccactccagcatgaatgagatgctggaggaggggcaggggtatgcc
atcatgctctacacctggagaagctgctcacgtgcaataccacaggtgaaatgcaacgag
cagcccaacagagtggagatctacgagaagacggtggaggtcctggaacccgaagtcacc
aaattgatgaatttcatgtacttccagcgcacagcaatcgaccgtttctgtggggaggtg
cgccgcctctgtcacatcgagcgcaggaaggactttgtctccgaggcgtacctgatgacc
ctcgggaagttcatcaacatgttcgctgtgctggacgagctgaagaacatgaagtgcagc
gtcaagaacgaccactccgcgtacaaacgagccgcccagttcctcaggaagatgtctgag
ccttcgtccatccaggagtctcagaatttgtccatgttcctggcgaaccacaacaaaatc
actcagtctctgcagcagcagttggaagtgattaacggctacgaggagctgctggcggac
attgtcaacctgtgcattgattactatgagaacaagatgtacctcactcccagtgagaaa
cacatgctgctcaaagtaatgggttttggcttgtacctcatggacggaaacagcagcaac
atctacaaactagacaccaagaagagaatcaacctcagcaagatcgacaagtttttcaag
caactccaggttgtccccctgtttggtgacatgcagatcgagttgtcccgctacatcaag
accagcgctcactttgaagagaacaaatccaggtggacttgcatatctatatccagcagc
ccccagtacaacatctgtgagcagatgatccagatccgcgaggatcacatgcgcttcatc
tcggagctggctcgctatagcaacagcgaggtggtgaccggatctgggcgtcaggaggcc
cagaagactgacgctgagtacaggaagctgtttgacttggccctgcagggcatgcagctg
ctctcccagtggagcgctcacgtcatggaagtgtactcgtggaaactggtccatccaact
gacaagtactccaacaaggagtgccctgacaatgctgaggagtacgagagagccaccaga
tacaactacacaagcgaggagaagtttgcccttgtagaggtaatggcgatgataaagggc
ttgcaggtgctgatgggacgcatggagagcgtgttcaatcacgccatccgtcacaccatc
tatacagctctgcaggactttgctcaagtctcgctgcgtgacccactgcggcaggccatc
aagaagaagaaaaatgtcgtccagagtgtcctccaggccatccggaagacggtctgcgac
tgggaaaccggccgggagcctcacaatgatccggccctccgtggagaaaaagatcccaag
ggcggatttgacataaaggttcctcgccgcgctgtggggccctccagcacacagctctac
atggtgaggacgatgctggagtctctcattgccgacaaaagtggctccaagaagactctg
cgcagcagtctggaaggcccgaccatcctggacattgagaagtttcaccgcgagtccttc
ttttacacccacctgctgaattttagtgagaccttgcagcagtgttgtgacctctcccag
ctttggttcagggagttcttcctggagctcacaatgggtcgcagaatccagttccccatc
gatatgtccatgccctggatcctcaccgaccacatcctggagaccaaggaagcttccatg
atggagtatgtgctgtatcccctggatttgtacaatgacagtgcacactacgccctgacc
aaattcaataagcagttcctctacgacgaaatagaagctgaggtgaacttgtgctttgat
cagtttgtctacaagttggctgatcagatatttggctactacaagattctggcaggaagt
cttctgcttgacaaacgcttgagggctgactgcaagaaccaaggggccaacatcccctgg
cctgcctccaaccgctatgagactctgctgaagcaacgccatgtccagctcctaggccgc
tccattgatctgaacaggctcatcactcagaggatttccgctgccctctcaaagtctcta
gagctggccatcaatcgttttgagagtgaggacctcacctccatcatggaactggaaggt
cttctggacatcaaccgcatgacacacaagctcctcagtaagtttctgacgctagacagc
atggatgccatgttccgcgaggccaaccacaacgtgtccgcaccctacggcaggataacg
ctgcacgtcttctgggagctcaactacgacttcttgcccaactattgctacaacggctct
accaacaggttcgtgcgcaccatcctgcccttctcccaagagttccaaagagataagcca
cccaacgctcagcctcagtatctgtacggatcaaagaccttgaacctggcgtacagcagc
gtatttagctgctacaggaacttcctgggtccgccgcacatcaaggtcatgtgtcgactg
ctgggctaccagggcatcgctgtggtgatggaggaactgctgaaggttgtcaaaagcctg
ctccagggcaccataatgcagtatgtgaagaccctgatggaggtgatgcccaagatctgc
cgacttcctcgccatgagtacggctctccaggcatcctggaattcttccaccaccagctg
aaggacatcgtcgagtacgccgagctcaagacggtttgcttccagaacctgagggaagtg
ggcaacgcactcctgttctgtctgctgagcgaacagagtctgtcacaggaagaagtgtgt
gatttgctgcatgctgcaccattccaaaacattcttccccgagtccatgtcaaagagggg
gaacgtctggatgccaagatgaagcgcttggaatccaaatacacagcgctgcacatggtt
ccactcatcgagcgccttggcacaccacagcaaatagccattgctcgcgagggcgacctg
ttgaccaaagagaggctgtgctgcggtctgtccatgttcgaggtcatcctcacgcgcgtg
cgggccttcctggaagaccccatctggcgcgggccgctgcccagcaatggcgtgatgcac
gtggacgagtgtgtggagttccaccgtctctggagcgcaatgcagtttgtgtactgcatc
cccgtgggagcccacgagttcacagtggagcagtgctttggagacggcctccactgggcc
ggctgcatgatcatcgccctgcttggacagcagagacgcttcgacgtgctcgacttcagc
taccacctcctcaaggtgcagaaacacgacggcaaggacgaggtcatcaagagtgtgcca
ctgaagaaaatggttgagcgaatccggaaattccaagtcctcaacaacgagatatttgcc
atcctgaacaagtacctgaagtccggagatggggagaacatgccggtcgaacacgtccga
tgcttccagccaccaatccaccagtcactagccagcagctga
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