Scophthalmus maximus (turbot): 118318552
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Entry
118318552 CDS
T09850
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like isoform X2
KO
K20493
leucine-rich repeat-containing protein 16
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118318552
Membrane trafficking [BR:
smau04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
118318552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
118318552
NCBI-ProteinID:
XP_035504227
LinkDB
All DBs
Position
13:18597399..18620779
Genome browser
AA seq
1539 aa
AA seq
DB search
MASREITASGFFGVSRDMTESIRKIIDKSSIKFVCGIKLDTKNGKSEDRILVLATWRLYF
LAPKIPTKVESTFNFLEIRALNSHPEHQVIIDTDKSSFSLRFESREHVNHVVSHINFALS
RIFNNSIFAPSICHSDSDLSEGSRKYSPSSETSVETQRACGGFSETYAALCDYNGISCKE
EVQWDVDTIYHSQDNREFNLLDFSHLESRDLAVIVASMAYNTWFTKLYCKDLRIGSEVTE
QVLHTVSKSSSLEEITLENAGLKSDFPQKMSAALSENPASVIHSLNLAHNSLDNQGVSNL
IQQVCRLSKGLRLLNLSKTSLTSKGVVSLSQALCSSDEYSNSLLHLDLSKNPGVLSGEDA
SNLYLFLSQPNCLVHLDLSGTDCSVDSLFGALLRGCCADLSFLNLSKNSFSHRKVKDTLP
LFRQFFSSAFSLTHVSLASMKLPPDVLRALLTGLTSNPHINDLHLDISGCELRTAGAAVI
QELFPRVSSVATLDISDNGLDADLLTVLPSLSRHPSLKHLNLGKNFNIKHRVLDEVLQKL
VQLIQEEECALQSLSLSDSRLRSRGTMLVNALGSNTCLRKVDLSGNNMEDIGAKMLSKAL
QINTTLRSVTWDRNSTSASGFLDVARALEHNFTLQYMPLPLSDISQAHRSAPERTEQALT
KIQRALVRNNQTQRFSQRQALRLHQGLVTSTAEQVMERLCVRVQQQVCVLRGVGELEEIH
AAKQVLKEARNSRALYPSLCELAHVLSVDGPVRQRLDSLAGELAKAADKELQVIVDSMVS
LCRELCPLSSAAAERLSPPLSSVSERVSIPRSAIRTALMERAAQDIHRALEEVRLSVVSY
LTNSIVDQILQELYATHKTLTRQVSHLKRWDGSSEDGTSWRFNRHRDSLDITDEELGNSI
DTIAIKKRSSRTRRIRPVSTRLSLCDDSSSSPPPSSVPSYSLPLSRSASWEGLSELPTQG
LPLHHVTRVRPRPPRRHKGGHVPAETDCSENGGISPLDDGLPDFYTKRVLPDSQLSSLHK
AHSLRRKKRRNMLAIFGFRKNRNQTLSSQGPQESEADIYGDGCHTVSTAPTGTATENVYT
LLQPPRSSARAGSPGEGADGKMNDHQGKNTLVLSPPTVPGIPHPGVGGSKHPFYSPREKA
EGDAVFDPPVETDRYWVEDKHRATEGVQVEKQWSEARQSDQHVERQRADDRLQERTFVDP
RTADRPTDRYWTESRHPDRHVDRQWTVDRHTQRQIDRKIERQWMGGRQIERSWSENRPTD
IQVDNPWTESRQQSRKMDRQVQALHLAQRPLPPYPSDRTPSPKQETDPLKSTEAAATDRH
QQDTQGDRHACADVGGGFADGWRGGTGGGRAAPPASKPDPPPQSSKPNLSKLRQRHRLES
SDALPALPGTEEEGDTEKDPGKMEKKERDKRRDSESHPPPIPEKPKTSSYVSFPKESANE
RNLPPPPVPPPVFRPAHGLPDRAASQGDEGLRPQAPVKPQRNRKAMSCDAGTDRESPNNV
EKPPNRKPPVKKPRLPQNRNKSLDLSDSIDSAPGHSELL
NT seq
4620 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgagagagatcactgcctctggtttcttcggcgtgagcagggacatgacagaa
agcatcaggaagattatcgataaatcctctatcaagttcgtttgcggcattaagcttgac
accaaaaacggcaagtcggaggacagaatactggtcctcgcaacatggcgtctctatttc
ctggcgccaaagattcccactaaggtagaatccacattcaacttcttggagattcgagct
ctgaattcccacccggagcaccaggttatcatcgacacggacaagtccagcttctccctg
aggttcgaatcacgggaacacgtcaatcatgtggtcagccatatcaatttcgccctctcg
cgaatattcaacaactcgatttttgccccttccatctgtcattccgacagtgacctttct
gaaggcagcaggaagtattcgcccagctcagagacttcagtggaaactcagagggcctgt
ggaggcttctcggagacctacgccgctctgtgcgactataatggcatcagctgcaaggag
gaagtgcagtgggatgtggacaccatctatcactcccaggacaaccgagagtttaacctg
ctggacttcagccacctggagagcagggatttagcggtgatcgtcgcctcaatggcatac
aacacctggttcacgaaactgtactgcaaagacctacgcattgggtcggaggtgacagag
caggtcctgcacacggtcagcaagtcgtcaagcctggaggagatcactctggagaacgcc
gggctaaaatcagacttcccgcagaagatgtcagccgctctctcagagaaccccgcctct
gtcatccactcgctcaacttggcgcacaactcactggacaaccaaggagtgtccaacctg
atacagcaggtttgtcgcctcagcaagggccttcgcctgctcaacctctccaagacctca
ctcacctccaaaggagtggtgtctctctctcaggctctgtgctccagcgatgagtactcc
aactctctcctgcacctggacctgagcaagaaccccggtgtcctctcgggggaggatgcg
tcgaacttgtatctgttcttgtctcagcccaactgcctggtccacttagatctgtcaggc
acagattgctccgtagactcactatttggggctcttctgagggggtgttgcgccgatctc
tcctttctgaatctttccaaaaattccttctcccacaggaaagtgaaggacacgctgcca
ttgttccgtcagttcttcagctcggccttcagcctcactcatgtcagcctggcctctatg
aagctgccccctgatgttctcagggctctccttacagggttaacctccaatcctcatatc
aacgaccttcatctggacatcagtggctgtgagctgagaacggcaggggcggctgtaatc
caggaactcttcccccgggtctcctctgttgccactctggatatttcagacaacggtctc
gatgcagatttgctcacagtgctgccatccctctccaggcacccctccctcaaacacctt
aatctgggcaagaacttcaacatcaaacacagggttctggatgaggtcctgcagaagctg
gttcaactcatacaggaggaggaatgtgccctgcagtctctgtccctatccgactcgcgc
ctgcgctccaggggcaccatgctggtcaacgccctgggcagcaacacctgccttagaaaa
gtggacctgagcgggaacaacatggaggacattggagccaagatgctgagcaaagccctg
cagatcaacaccacgctcaggagtgtaacttgggatcgcaacagcacctccgcatccgga
tttctggatgtggccagagcactcgaacataatttcaccttgcaatacatgcctcttccc
ctaagtgacatcagccaggcgcaccgcagcgcccccgagaggacagagcaggcactgact
aagatccagcgcgctctggtgaggaacaaccagacccagcgcttctcccagcgacaggct
ctgcggctgcaccaaggcctggttacgagcactgccgagcaggtgatggagcgcctctgt
gtgcgcgtacagcagcaggtgtgtgtgctacgaggtgtcggggagctggaggagattcac
gctgctaaacaagtgctaaaagaggccaggaattcccgcgccctctacccttcgctgtgt
gagctggctcacgtgctgtctgtggacgggccggtgcggcagcgactggactccctggct
ggtgaacttgccaaagctgcagataaggagctccaggtgatcgtcgactccatggtgtct
ctctgccgcgagctctgtcctttatcttctgctgcggcagagagattgagtcctccgctc
tcatccgtctccgagcgcgtgtccatccctcgctctgccatccggactgccctgatggaa
agagcagcgcaagacattcaccgagccttagaagaagtgaggctgtctgtggtttcctat
ctcaccaactccattgtggaccaaatcctgcaggagctgtacgccacccataagaccctg
acccgacaggtgtcgcacctcaagcggtgggacgggtcgagtgaagacgggacaagctgg
aggtttaacagacacagagactctctggacatcacagatgaggagctcggcaacagcatt
gacacaatagccattaagaagcgcagctcgagaacaagacgaatacgacctgtctccacg
aggctgagtctgtgtgacgactccagctcctccccacctccctcctctgtgccatcgtac
tcattgccgctatcccgctcggcatcgtgggagggcctgtcagagctgcctacacagggc
ttgcctctacatcatgtgacacgggttagaccgagacctccaaggaggcacaagggaggt
cacgtccctgctgagacagactgcagtgaaaatggaggaataagccctctcgatgacgga
ctccctgacttttatactaaaagggtgctccctgatagtcagctctcgtctctgcacaaa
gcccactccctgaggcggaagaagaggagaaacatgctggccatcttcgggttccgtaag
aaccgcaaccaaactctgtccagtcaggggccccaggagtccgaagcagatatttatgga
gatgggtgtcacactgtttccacagcacccacagggacagccacagagaacgtgtacacc
ctccttcagcctccgaggtcctctgccagagccggatctcctggcgaaggggctgatggg
aaaatgaatgatcaccaggggaaaaatactctcgttctgagtccgcccacggtgccgggc
atccctcatccaggcgtgggaggaagcaaacaccccttttattcccccagagagaaagct
gaaggagatgctgtgtttgatccgccggtggagacagacaggtactgggtggaagataaa
catagagcgacagagggggtgcaagtagagaagcagtggtcggaagcgaggcagagcgat
cagcatgtggagagacagcgggctgacgacaggctgcaggaaagaacttttgtcgatcca
agaacggccgacagaccaacagacaggtattggactgagagcagacacccggacagacac
gtggacagacagtggactgttgatagacacacccagcggcagatcgacaggaagatagaa
aggcagtggatgggcgggaggcaaatagagaggtcgtggtccgagaacaggccgacggac
atacaggtggacaatccgtggaccgagagcagacaacagagcaggaagatggacaggcaa
gtgcaagcgcttcacttggctcagaggccgctgcccccgtacccgtcggacaggacgccc
tcgccgaaacaggagacggatcctctgaagagcacagaggcagcggcgacagaccgccat
cagcaggacacgcagggagacagacacgcgtgtgcggacgtcggcggagggttcgcagac
ggctggagaggtggcacgggaggaggtcgagctgctccgcctgcatccaaaccggatccc
ccgccgcagagcagcaaacccaacctgtctaagctgaggcagaggcatcggctggagagc
tccgacgctctcccagctctaccagggacagaggaggaaggagatacagagaaggatcct
ggaaagatggaaaagaaagaaagagataaaagaagagattcggagagtcatccgcctccg
attccagaaaagccaaagacgtcctcctacgtgtcttttccaaaggaatcagccaatgag
agaaacttaccccctcctcctgtgccgcctcctgttttcaggccggcacatggactaccg
gacagagctgcaagtcaaggtgacgaagggctgagaccgcaggcgccagtgaaaccacag
agaaacagaaaggccatgtcttgtgacgcaggcactgacagggaaagccctaataatgtt
gagaagcccccaaatcgcaaacccccagtgaaaaaacctagacttccccaaaacagaaat
aagtccctggatttgtctgacagcatcgactctgcgcccggtcacagcgagctgttgtga
DBGET
integrated database retrieval system
