Scophthalmus maximus (turbot): 118318633
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Entry
118318633 CDS
T09850
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A isoform X2
KO
K12849
pre-mRNA-splicing factor 38A
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118318633 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
smau03041
]
118318633 (prpf38a)
Spliceosome [BR:
smau03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118318633 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
118318633 (prpf38a)
BRITE hierarchy
Motif
Pfam:
PRP38
PRP38_assoc
Allexi_40kDa
Motif
Other DBs
NCBI-GeneID:
118318633
NCBI-ProteinID:
XP_035504365
EnsemblRapid:
ENSSMAG00025020240
LinkDB
All DBs
Position
13:756362..760820
Genome browser
AA seq
308 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELRFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTAVDCYKYL
EPLYNDYRKVKSQNRNGEFELMHVDEFIDDLLHAERMCDIILPRLQKRQVLEEAEMLDTR
ISALEEDLDEVESSEEEDEEEEKPERLQTPEPHRRSYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSKSPGHHRSHRHRSHSKTPERSSKKS
HKKSRRNE
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacagaaccgtgaaagacgcgaacagtatccacggaaccaacccgcagtacctg
gtggagaaaatcatccggacccgaatctacgagtccaaatactggaaggaggaatgtttc
ggtctcaccgccgagctggtcgtcgacaaagccatggagctgaggttcgtcggaggagtt
tatggcggcaacatcaagcccactcccttcctctgcctcacgctgaagatgcttcagatt
cagccggagaaggacatcatcgtggagttcatcaagaatgaggacttcaaatacgtccgt
ctgctcggagcgatgtacatgaggttgaccggcacggcggtggattgttataaatacctg
gagcctttgtacaacgactacaggaaggtgaagagtcagaacaggaacggagagtttgag
ttgatgcacgtggatgagttcattgacgaccttctgcacgccgagagaatgtgtgacatc
attctgccccgacttcagaagagacaggtgctggaggaggccgagatgttggacactcgc
atcagcgccctggaggaagacctggatgaggtggagagcagtgaagaggaggacgaggag
gaagagaagccagagagactccaaaccccggaaccccacagacgcagttaccgtgacaat
gaccgacctcgtcgctctccgtcccctcgctacagacgcagccgctcccccagacggagg
agcagatccccaaagaggcgcagcccgtcgccacggagagaacgtcatcgtagcaaaagc
ccgcgcagacaccgcagccgctctagggaacgacgccaccgctccaaatccccgggtcac
cacagaagccaccgacatcgcagccattcaaagaccccagagaggagttcaaaaaagagt
cacaagaagagtcgaagaaacgagtga
DBGET
integrated database retrieval system
