Scophthalmus maximus (turbot): 118318747
Help
Entry
118318747 CDS
T09850
Symbol
sned1
Name
(RefSeq) sushi, nidogen and EGF-like domain-containing protein 1 isoform X1
KO
K24470
insulin-responsive sequence DNA-binding protein 1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smau04990
]
118318747 (sned1)
Domain-containing proteins not elsewhere classified [BR:
smau04990
]
EGF-like domain-containing proteins
hEGF / cEGF domain-containing proteins
118318747 (sned1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
NIDO
hEGF
EGF_TEN
fn3
EGF_2
EGF_CA
EGF_Teneurin
SdrD_B
cEGF
EGF_3
EGF_MSP1_1
MAGP
EGF_DL_JAG
Motif
Other DBs
NCBI-GeneID:
118318747
NCBI-ProteinID:
XP_035504576
LinkDB
All DBs
Position
13:complement(20864622..20891116)
Genome browser
AA seq
1385 aa
AA seq
DB search
MVLVLRALLPCLCTLLALDLLPGVYPAVPLEDFYPFGQDKGDLQTIAQDDGGSRLVEISV
AFPFFGDRHTGLYVNNNGLVSFLREVSQFTPVAFPIAGDRRVVAPFWADVDNRRAGRVFY
RESQAPSVLSRASADVRTYFSEFPGFNATWVLVSTWHQVTFFGGSSLTPVNTFQVVLITD
GELSFTIFQYNNITWTTGMHASSGGNLAGLGGIAAQAGFNAGDGKRYFNIPGSRTADVVN
VEGTTNVGYPGRWVFRLDKAHVEVGGCNNSASVCPHLRPCLNGGQCIDDCITGNPSFTCS
CLAGFTGRRCQIDVNECASHPCQNGGTCKDQINGFICQCPPGYTGMLCETDIDECKERPC
LNNASCVQGTGSFTCVCEPGYTGALCETDINECESQPCLNGGECIDRVANFTCVCPAVVT
GTLCETEVVALQLNSTEAVNQTALCEGDDCETHQICEYAGSGTDNCTCAPGFYGDKCEEE
CLCENGGVCVDINGTCECPSGYTGPYCQFEVTQMPCSNSRTCPDGGPCLEYGGAYLCTCQ
TSAAELDPKDFYPYVQPRSVCDSSPCLNGGYCYERDGGYTCECKYGYWGKHCEKVRLNTC
ASGPCRNGGSCKEEAGSYRCVCPYRFTGKHCEVGKPDPCSSSPCLNGGTCFHYIGKYKCE
CTEAFSGRHCDISRSSLQPSAGLSCGPPPPVKHAEVQFFLTTPGSMAVYICHSGFMSVPR
ATQSICGIQGDWSQPPVCEEINACVSQPCLNGGTCQNKGGSYQCVCSDGFSGNRCQTDIN
ECLSEPCKHGGTCEDQPGSYLCHCPQGFKGPDCEMEQDACDSNPCLNGGACRGYRRHYVC
VCKGGFFGDQCQMLEDPCVLQLCGNRGVCRTDRRGNYNCLCKTGYTGKDCEKDLLPPSGL
HVLRVEENEVELRWDEPEPSHSLISGFAVTYAPLGGRGDPKTDYLDRHQSTHVMRGLVPG
LLYNISTFSVKRSTSRKDSSQPATALIRTRPRRVEQLQVVNVSSSQVWLSWLVQAARHAA
VSRVHVSLLPSDGTEARTAVLNTSTAEYTFSSLLPGQMYTVDVLTQSGIRPDEFPSTSHS
AGPLAFWTRPLPPQNLSLSHVTTNSALITWSRHPRSVPDGFVVNVTRGLNTRSRFLPNGK
LGSYTLRELTPGQHYYLALTSVKSTGQEQIHSAPQHLAFSTLPMEARSPRRERPASGRTP
PSSQPQDLGGTAETDNSQEFPRYTELIDRRGKITAKFPHLPRKAVRHRNKPEPPIRLEKM
EETTNKISLALEIQEEGLRTKPELPQDCRGVPCQNGGTCVDGGDSFICDCAAGFKGRQCE
LSCQRVPHPCTRIYSETKSVPMWEDGVCHYLYKRTYKVQQDVCYREICEPVLPKKSQTRR
THRQQ
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atggtgttggtgctgcgagccctgctgccctgcctctgcaccctgctcgccctggacctg
ctgccgggggtgtaccccgccgtccccctggaggacttctatccctttggccaggacaag
ggggacctgcagaccatcgctcaggacgacggaggctccaggctcgtggagatctctgtt
gcattccccttctttggagacaggcacacgggactctatgtcaacaacaatggcctcgta
tctttcctgagggaggtgtctcaattcacgcccgtagcttttccgatcgctggggacagg
agggtcgtcgcgccattctgggcggatgtggacaaccgccgggccgggagagtcttctac
agagagagccaggcgccctccgtcctgagccgggcctcggccgatgtcaggacgtacttc
tcagagttccccggcttcaacgcgacgtgggtcctcgtctcgacatggcaccaagtgact
ttcttcggaggcagctccctcacgccggtaaatactttccaagtggtgcttattacagac
ggagagctttccttcactatattccagtacaataacatcacttggaccacaggcatgcat
gccagcagcggaggaaacctggccgggctgggagggatcgcagcgcaggcaggtttcaac
gccggtgacggcaagcgctacttcaacatccctggctctcgcacggccgatgtggtgaac
gtcgaggggaccaccaacgtaggctacccaggcagatgggtcttccgtttggacaaagca
cacgtggaagtgggcggctgcaataactctgcatcagtgtgcccacacctgcgaccgtgc
ctgaacggaggccagtgcatcgatgactgcattacaggaaacccctccttcacttgctcg
tgcttggctggcttcaccggtcgacggtgccagattgatgtcaatgaatgtgcctcacac
ccttgccagaatggagggacgtgtaaagaccagattaacggtttcatctgccagtgtcct
cctggatacactgggatgctgtgtgaaacagacattgacgagtgcaaagaaaggccgtgc
ctcaacaacgcgtcgtgtgtacaaggcaccggcagtttcacctgtgtgtgcgaacccggc
tacactggtgcactgtgcgagacagacataaatgagtgcgagtcgcagccctgtctgaac
ggaggagagtgcatcgatcgggtggccaacttcacctgcgtctgtcccgctgtcgtcacc
gggacgctctgcgagacagaagtggtggcgctccagctgaattcaaccgaggcagttaac
caaacagctttgtgtgaaggggatgactgcgagacacaccagatctgtgaatacgccggc
tccgggactgacaactgcacgtgcgctccgggcttctacggcgacaagtgtgaagaggaa
tgtctttgcgagaacgggggtgtctgtgtggacatcaatgggacttgtgaatgcccctcg
ggctacacaggaccctactgtcagtttgaagttacccagatgccctgcagcaacagcagg
acgtgtcccgatggaggcccttgcttggagtacgggggagcctacctgtgtacatgtcag
acgagcgcagcagaactagaccccaaggacttctacccctatgtacagccccgatcggtc
tgcgactcctctccatgtctgaatgggggctactgctacgagcgggacggaggctacacc
tgcgaatgcaaatacggatactgggggaagcactgtgagaaagtcagacttaatacgtgt
gcctctggcccctgccgcaacggaggctcctgtaaggaagaggcgggcagctacagatgt
gtgtgtccctacaggttcactggaaaacactgtgaagtggggaagccagacccctgttcg
tccagcccgtgtctaaatggagggacgtgttttcactatataggaaagtataaatgtgaa
tgcactgaggcgttcagcggcagacactgtgatataagcaggagctcacttcaaccatct
gcaggactgagctgcgggccgccgccgcccgtgaagcacgccgaggtccagttcttcttg
acaacaccgggctccatggctgtgtatatatgccactcgggcttcatgtcggtgcccaga
gccacccagagcatctgtgggattcagggagactggagccagccacccgtttgtgaggag
atcaatgcgtgtgtgtcgcagccttgccttaatggtggtacgtgtcaaaacaagggcgga
tcctaccagtgtgtgtgtagtgatggcttcagtgggaaccgctgtcaaacagacataaat
gaatgcctgtcggagccctgtaagcatggggggacgtgtgaggaccagcccggctcctac
ttgtgccactgtccacaaggcttcaaaggcccagactgtgaaatggagcaggacgcgtgt
gactccaacccctgtctgaacggaggagcgtgtcggggttacaggaggcattatgtgtgc
gtgtgcaaaggggggtttttcggggaccagtgccagatgttggaggacccgtgtgtactg
cagctctgtgggaaccgcggcgtctgccggactgacaggagaggaaactacaactgcctt
tgcaaaacgggatacacaggcaaagactgtgagaaagacctgttgcccccctctggtctc
catgtgctgcgagtggaggagaacgaagtggagctgcgctgggacgagccggagccctcg
cacagcctgatcagcgggttcgccgtcacctacgcgcccctgggggggaggggcgacccc
aaaacagattacctggacaggcatcagtccacccacgtcatgcgaggcctggtccccggc
ctgctgtacaacatctccaccttctccgtcaagcgcagcaccagcaggaaagactccagc
cagccagccaccgcactcatacgcaccagacctcggcgggtggagcagctccaggtggtc
aacgtgtcctcgtctcaggtctggctgagttggctggtccaggcagctcgtcacgcagca
gtcagcagggtgcatgtgtctttgctgccctcggacgggactgaggctcgcactgcagtg
ctcaacaccagcaccgctgaatacaccttcagttcattgcttcctggtcagatgtacaca
gtggacgttctgacacaaagtggaatcagaccggatgagtttccctccaccagccactca
gctggaccactggcattctggacaaggcctctccccccacagaacctctccctgtcacat
gtgaccactaactcagcactgatcacctggagccgccacccgagaagtgtccccgacggc
tttgtggtcaacgtgacccgaggcttgaacaccaggagtcgcttcctgcccaacgggaag
ttgggatcatataccctccgcgagctgacgccaggacagcactactatctggctctcacg
tccgtcaaaagcacagggcaggaacagatccacagcgcacctcagcacttagccttctca
accttgccaatggaggccagatcaccgaggagagagaggccagcgtctggacgcacacct
ccctcgtctcagccacaggacctgggaggcacagcagagacagacaactcacaggaattc
cccagatacacagagctcatcgacaggaggggaaagatcacggccaagttccctcactta
ccgagaaaagccgttcgacatcgtaataagccagagccaccgattagattagagaagatg
gaagaaacaacaaacaaaatcagcctcgcactggagattcaagaagaagggttgaggacg
aagcctgagttgccccaggactgccgcggtgtgccctgccagaacgggggtacgtgtgtg
gacggaggagactccttcatctgcgactgcgcagcggggttcaagggccgacagtgtgaa
ctgtcgtgccagcgagtgccacacccgtgtacccgcatctactcggaaacaaagagtgtg
ccgatgtgggaagatggagtctgccactacctgtacaaaagaacgtataaagtgcagcag
gacgtctgctatcgagagatctgtgaaccggtgcttcccaagaaaagtcagactagaaga
acacacagacaacaataa
DBGET
integrated database retrieval system
