Scophthalmus maximus (turbot): 118318983
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Entry
118318983 CDS
T09850
Symbol
atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04136
Autophagy - other
smau04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118318983 (atg2a)
04136 Autophagy - other
118318983 (atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
smau04131
]
118318983 (atg2a)
03029 Mitochondrial biogenesis [BR:
smau03029
]
118318983 (atg2a)
Membrane trafficking [BR:
smau04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
118318983 (atg2a)
Mitochondrial biogenesis [BR:
smau03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118318983 (atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Saw1
CDC45
Motif
Other DBs
NCBI-GeneID:
118318983
NCBI-ProteinID:
XP_035504894
LinkDB
All DBs
Position
9:15404181..15425977
Genome browser
AA seq
2039 aa
AA seq
DB search
MSRWLFPWSGSIKKRACRYLLQHYLGHFLQERLSLDQLGLDLYNGSGVIKEINLDVWAIN
ELLESLGAPLEIVDGFVSSITVTIPWQALLTDHCTLEVTGLQITCRPKYRTSGGWDSQGW
SSSMTSSMQLAQECLKDPPEASEEPPAQLEGLEMFAQTIETVLRRIKVTFIDTIVRIEHQ
PLDLETGVALEMHIKRLEYFDEAVRDPASQTAVPVDIHQPPAFLHKILQLSAVQLFYDST
GTVQGFPEENHPDSATASEGLEEEEEEEEEGEEEEEEDEEDEEEEEEEEEDEKAPKPLAA
PPYPPSQPLLIGSCSGFIETTVKIKQNEMLPGPKLELDGKVGCVHMLLAPDQITHLTDLL
AALCIDIESETKCGGVQGRPLDSDDLRMIEEDLSKQLGSSPRDGDWDEEPDLEPYVTGLE
NGDMFYSMGPTGMSSSMTSVRSGSELSDSDMESSTQSLASLTQPAALSAQGLMNCPRRYP
VAGCLSSVPQASSRTRGRSHSGQAEQMKPDALLRLTLGGLTLTLLQEDPPASTDRASSLA
QVSQVFFRELAFFKDSMFSERDFHHLRGGFAKACPHSHLRLTGAAVQVVCETRSGRRHSR
AVTSDISFSRLELLECLWEDGRPQYSELLQFQKSGLFSIGTAARPCAQLHYSLSEKHLRK
GKQRVVRRESVVRVELAELTAELDLDILSRLGNLTKAFSHCPTQTTGPGLAQTQSSELCS
CFTLLSPHAVLRLRFPIPDLRPLPKRRPPTQRAVRQEILVLELMELELKHQEAPDLQGGQ
TIPGQPWAPCLTQLLEASFTDLHGSFEGWEGGSFPCIRVKKNRDSLPRISVHVRGGDAQG
PTAGLSGTNMGLIRDLGAAFFESHCELNDKTSSPFSSNRTMFETEEMVIPADPEEMRQFQ
AQCVAQCQCAVDINLPLAYILLPSKQAFQSIYNRINNDLLMWEPPPPPLPSARSPDHSRH
RRDEFQLCKSAFRLDSDSEEDEPPFYLACESDGKTLQSAPRPNHNLSLLSLTVIIGKGRL
QARTDRKEDQSHGEIILDLEGGKIFSVAQHQDDPNLNFLCLESRRVELYHKAVVTDTPIP
QRLEIPSFAPPKHLDPTIYPTEVGVSSVSGREGDLQMLSTAIKVTLDLQRNVKEFLVALR
LQGATMRHYMAQSSQSWHEQLVDFLDVIDDPILGYTAPAVITVLHTHLTTCAVDYRPLYL
PLRVLFTAESFSLSSNIIVDTATFHLRFILDDSALYLSDKCETDTVDLRRDYVCVLDIDL
LELAITTWKGSDTGKLTQPLFELRCSNNVVHLHTCADSCAALVNMLQYLVSQGDLHPPPR
HASPTEIAGQKLPLSECPASVLPCPPAETAEINQYDLADALIDTEKSHREESLDPGSPSM
RRGSPVSVYLFPGEAPKRSPSVLQEEEEEDSELDGLVATATEAQADVMSEEGSDGSTDND
DFCILEAPGMGIPPRDGEPVVTVLSQGPIRVKDSHFSRPRGSSDLLRAPSRFPVPQSRVV
LREISVVWHLYGGKDFGGKPMSIHAQQANRGRSVPAGVRMSPSRSVGASRPQNSWRWAGG
SGRQHTLLMEIQLTKVSFQHESYPLAVAGPDGEGSVAAIVGVGPGSEQPLSRQVFIVQEL
EVRDRLASSQMNKFLYLHTSESMPRRAHSNMLTMKALQLCPESGLGGPECCLRVSLLPLR
LNIDQDALFFLKDYFSNLASSVNPYLPVDPATEVKADPSQKVSDEAEVAAGLGPDLTASV
ETTYSEQSSSSAGSSSSSDQPIYFREFRFTSEVPIWLDYHGKHVVIEQGTFAGILIGLAQ
LNCSELKLKRLCCRHGLLGVDKVIQYAVTEWLTDIRKNQLPGILGGVGPMHSVVQLFHGV
RDLFWLPIEQYRKDGRIIRGLQRGAASFGTSTASAALELSNRLVQAIQATAETVYDILSP
TPPLNRFTITEGRATSSRPRRAAQPADLREGVAKAYDTVREGVIDTAQTLCDVASRGHEQ
KGLPGAVGGVLRQIPPTVVRPLIVASEATSNLLGGMRNQIKPDARKEDFLKWRTEDGQE
NT seq
6120 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctggctgttcccctggtcgggctcgatcaagaagcgggcctgtcggtacctc
ctgcagcactacctcggacactttctgcaggagagactgagcctggaccagctgggcttg
gacctgtacaacggcagcggtgtcatcaaggagatcaacctggacgtgtgggcgatcaat
gagctgttggagtctctgggagctcccctggagatagtggatggtttcgtgagcagcatc
acggtgaccatcccctggcaagcgctcctgaccgatcactgcaccttagaagttactggt
cttcagataacatgtcgaccaaagtaccgaaccagcgggggttgggactcccagggctgg
tcatccagcatgacctccagcatgcagctggctcaggagtgcctgaaagaccccccagag
gcgtccgaagagccgcctgcccaactggaggggcttgagatgtttgcacaaaccattgag
acggtccttcggcgtattaaagtcacctttattgacactatcgtccgcatcgagcaccag
cccctggacctggaaacaggcgttgccttagagatgcacatcaaacggctggagtacttt
gacgaggcggtgcgagatccagccagccagactgccgtgcctgtcgacatccaccagcca
cctgccttcctgcacaagatcctccagctgagcgctgttcagctgttttatgacagcacc
ggcacagtgcagggttttcctgaggagaatcatccagattcagcaacagcaagtgaagga
ctggaagaggaggaggaggaggaagaagaaggagaagaggaggaggaggaagatgaagaa
gatgaggaggaggaggaggaggaggaggaagatgagaaagcaccaaagcccctggctgcc
cctccctatcctccgtctcagccactgctcataggaagctgctccggtttcattgagacc
accgtcaagatcaaacagaatgaaatgctgcctggaccaaagttggagttggatgggaag
gtgggctgtgtccacatgctgctggctccagatcaaataacccacctgacagacctgctg
gcagccctctgcatagacattgagtcagagactaagtgtggtggagtgcaaggccgcccg
ttagactcagacgacctgcgcatgattgaggaagacctcagtaagcaacttggttccagt
cccagagacggggattgggatgaagagcctgacctggagccttatgtcactggcctggag
aatggagatatgttttactctatgggtcctactgggatgagcagtagcatgacatctgtg
cgctccggcagcgagctgtcagacagtgacatggagtcctctacacagagtcttgccagc
ctcacacagcctgcagcactgtctgcacagggccttatgaactgtcccaggagatatcct
gtagcgggctgtctgtcgagtgtaccgcaggccagcagccggaccagaggacgctcacac
agcggccaggcagagcagatgaagcctgatgctctgttgcgtctgacgcttggcgggctc
accctaaccctgctgcaggaggacccgcctgctagcactgacagagcctcgtcattggct
caggtgtctcaggtgttctttcgggagttggccttcttcaaagacagcatgttcagcgag
agagacttccaccatctgagaggcggctttgccaaagcctgtccacactctcatctaaga
ctgacgggagcagcagtgcaggtcgtttgtgagacgcgaagcggaagacgccacagcaga
gccgtgacctctgacatttccttcagcagactggagctgttagaatgcctctgggaggac
ggaagaccccagtacagcgagttgcttcagttccagaaatctggtctgttctcaattgga
actgcagccagaccatgtgcccaactacactatagcctcagtgaaaaacacctgcgtaag
ggtaaacagcgggtggtgcgtcgggaaagcgtggtgcgggtggagctggcagagctgact
gctgagctggacctggacatcctcagtcgcctgggtaacctgactaaagccttcagccac
tgtcccacacagactactggaccgggactcgctcagacccagagcagtgagctgtgctcc
tgcttcaccctcctctccccacacgcggtcctcaggcttcgtttccccatacctgacctg
cggcccctcccaaagcgtcggcctccaactcagagggcagtgcggcaggaaatcttggtg
ctggagctgatggagctggaactgaaacaccaggaggcaccggacctccagggtggccag
accatccctgggcagccgtgggctccatgcctcacccagctcctagaggcctccttcact
gacctgcatgggtcgtttgagggatgggagggtggctctttcccctgtatcagagtgaag
aagaatcgtgactctctccccaggatatctgtgcatgtgcgtggaggtgatgctcagggc
ccgacagcaggtctgagtgggacgaacatgggcctcatcagggacctgggggccgccttc
tttgaaagtcactgtgaactcaacgacaaaaccagctctccgttctcctccaaccgcacc
atgtttgagacggaggagatggtgattccagccgaccctgaggagatgcgtcagtttcag
gcgcagtgtgtcgctcagtgtcagtgtgctgtggacatcaacctgcctctggcctacatt
ctcctacccagcaaacaggccttccagagcatctacaacaggatcaacaatgatctgttg
atgtgggagccgcctccccctcctctcccctcagctcgtagccccgaccacagccgccat
cgtcgcgacgagtttcagctctgcaagtcggccttcagactggactctgattcagaggag
gatgagcctccgttctacttggcatgtgaatcagatggaaagacactgcagtcggctccc
cgcccaaaccacaacctcagtctcctctccctcactgtgattatcggcaaaggacgcctt
caagccagaacagacaggaaggaggaccagagtcatggggagatcatactcgacctggaa
ggagggaagatattcagtgttgcgcagcaccaggatgaccctaatctcaatttcctgtgt
ctggagagcagacgagtggagctctaccacaaagcagtggtaacagacacccccatccca
cagcgattggagataccaagcttcgctcccccaaaacacttggaccctaccatctatccc
acagaggtgggtgtgagcagcgtgagcggcagggagggggatctacagatgttatccaca
gccatcaaagtcacactggacctacagaggaacgtcaaggagttccttgttgcccttcga
cttcaaggtgccaccatgcgacattacatggcacagagcagtcagagctggcatgagcag
ctggttgacttcctggatgtcattgatgatccaatcctgggatacacagcacctgccgtt
atcactgtgctgcacacacacctcactacctgtgccgttgactacagaccactgtatctg
ccactgcgagtgttgttcacagcagagtcattctctctgtccagtaatatcatcgtcgac
actgccaccttccacctcagattcatcctggatgactctgctctctacctctctgacaaa
tgtgagactgacaccgttgacttaaggagagattatgtgtgtgttctggacatcgacctg
ctggagctcgccatcaccacatggaaaggcagcgatacaggcaaactgactcagcctctc
ttcgagctccgctgctccaacaacgtggtccacctccacacctgtgctgattcctgcgct
gccctggtcaatatgctgcagtacctggtctcccagggtgacctacaccccccaccgcga
cacgcctcacccactgagatcgctggccagaaattaccactgtcagagtgtcctgcatcg
gtgctgccctgccctccagctgaaaccgctgagatcaaccagtacgatctggctgatgcc
ttaattgacacagagaagagccacagagaagagagtttagatccaggttcaccctccatg
cggcgaggctcacctgtctctgtctacctgttcccgggtgaagccccgaagcgaagcccc
tccgtcctgcaggaggaggaggaggaggactctgagctagatggtttggttgccacagca
acagaggctcaggcagacgtgatgtcggaggaaggctcagacggctccaccgacaacgac
gacttctgcatcctggaggcccctggcatgggcattcctcccagggatggggagcctgtg
gtgactgtgctgtcccaggggcccatcagggtgaaggacagtcacttctcgcggcctcga
ggcagctcagacctgctccgagcccccagccgcttcccggtgccccagagcagggtggtg
ctacgggagatctctgtggtctggcatctgtatgggggcaaggactttggtggcaaaccc
atgtccatacatgcccagcaggcaaacagaggtcgttcggtccctgctggtgttcgtatg
tccccgtctcgctccgttggcgcctctcgtccccagaactcctggcgatgggcaggaggc
agcggacgtcagcacacactgctgatggagatccagctcaccaaggtgtccttccagcat
gagtcctacccattggcagtagcggggccggatggggaggggtcagtggcagccatagtc
ggggttggtcctggcagcgagcagcccctctccaggcaggtgttcatcgtccaggagctg
gaagttcgcgaccgattggcctcctcacaaatgaacaaattcctctacctccacaccagc
gagagcatgccccgccgagcccactccaacatgctgacaatgaaggcactgcagttgtgt
ccagagtctggccttggtggtccagagtgctgtctccgggtcagtctgctgccactacga
ctgaacatcgatcaggacgcacttttcttcctcaaggactatttcagtaatctagcctcc
tctgttaacccttacctgcctgtggaccctgcaactgaagtgaaggcagacccctcccag
aaggtatctgatgaggcggaggtagctgctggtctgggacctgacctcacggcttctgtg
gaaacgacctacagcgagcagagctcctcctctgctggctcctcgtcctcctctgaccag
ccaatctacttccgggagtttcgtttcacctctgaagtgcctatctggctggattatcat
ggcaaacatgttgtcattgagcagggaacgtttgcaggaatcctgatcggcctggcccag
ttaaactgttccgagctgaagctaaagaggctctgctgcagacatggtctcctcggtgtc
gacaaagtgatccagtacgccgtcacagagtggctgacagacatcaggaagaatcagctg
ccgggcattctgggaggtgttggcccaatgcactcagttgtccagctgttccacggagtg
agggatctgttctggttgcccatagagcagtacaggaaagacgggcgtattatccgaggt
ctccagaggggggcggcatccttcggcacctcaacagcatcagctgctctggagctcagc
aacaggctggtgcaggccatacaggccacagcagagacggtgtacgacatcctttctccc
acgcctcctctgaatcgcttcaccatcacagagggccgggccacctccagccgaccccgc
agagccgcccagcctgcagacctccgagaaggtgttgctaaggcctacgacactgtcaga
gagggagtgattgacacagctcagactctgtgcgatgtagcatcccgcggccacgaacaa
aaggggctgcctggtgctgtgggaggcgtcctgcggcagataccacccaccgtggttcga
cccttgatagttgcctctgaagctacctccaatctgcttggtggcatgaggaaccagatc
aaaccagacgcccggaaggaggatttcctgaagtggcgcacagaggatggtcaagaatga
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integrated database retrieval system
