KEGG   Scophthalmus maximus (turbot): 118319145
Entry
118319145         CDS       T09850                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:smau04121]
    118319145 (rnf4)
Enzymes [BR:smau01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     118319145 (rnf4)
Ubiquitin system [BR:smau04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    118319145 (rnf4)
SSDB
Motif
Pfam: zf-RING_2 zf-C3HC4_2 zf-RING_UBOX zf-C3HC4 zf-RING_5 zf-C3HC4_3 zf_RING_Vps8 zf-RING_4 zf-rbx1 Prok-RING_4 RING_XB3-XBAT31 Rtf2 zf-C3HC4_4 zf-UDP TRAF3_RING zf-RING_11 IBR_1 zf-RING_6 zf-RING_10 zf-ANAPC11 zf-RING_16 zf-C3HC4_5 DZR
Other DBs
NCBI-GeneID: 118319145
NCBI-ProteinID: XP_035505177
LinkDB
Position
9:24081086..24085941
AA seq 217 aa
MSSSAQRKRRTTGSPLGSRPCTKTSRAANGRRTNTNRATKRTADGDPAPPQETIDVMDNT
EGYVEEVVDLTCEGSEAAVVDLTSNDSVLVTSVNQPFNKSISQSTSQSLVDEGPQNRRVP
TGESYIVSSDEDEDTPHVLSAGTVSSEHTSRSTPGTISCPVCLDSYSEIVDSGRLVVSTK
CGHVFCSQCLRDALTSSHTCPTCRKRLTHRQYHPLYI
NT seq 654 nt   +upstreamnt  +downstreamnt
atgagcagctctgctcagaggaagaggaggaccacaggaagccctcttggttccagaccc
tgcaccaagaccagcagagcggctaacggcaggaggactaacactaacagagcaacgaag
aggacagctgatggggaccctgcccccccccaagagaccatcgatgtgatggacaacact
gaaggctatgtggaggaggtggtggatctgacctgtgaaggatcagaagctgccgtggtc
gacctcacaagcaacgactccgttctggtaacatcagtcaatcagccattcaacaagtca
atcagtcagtcaacaagtcaatcactggtggacgaaggtcctcagaacaggagagtcccc
acaggtgagagttacatcgtcagcagtgacgaggacgaggacacccctcatgtccttagt
gctggcacagtgtcctctgaacacacctccaggtcgactcccgggacaatcagctgtccc
gtctgtctggattcgtactctgagattgttgacagcggccgattggttgtttccactaaa
tgtggtcatgtgttctgcagtcagtgtttgagagatgctctgacatcatcgcacacatgt
ccgacctgcaggaagagactcacccaccgccagtaccaccccctctacatctga

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