Scophthalmus maximus (turbot): 118319158
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Entry
118319158 CDS
T09850
Symbol
si:ch73-233f7.1
Name
(RefSeq) protocadherin beta-15
KO
K16499
protocadherin delta 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118319158 (si:ch73-233f7.1)
Cell adhesion molecules [BR:
smau04515
]
Cadherins
Protocadherins
118319158 (si:ch73-233f7.1)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_3
Cadherin_tail
Motif
Other DBs
NCBI-GeneID:
118319158
NCBI-ProteinID:
XP_035505207
EnsemblRapid:
ENSSMAG00025016228
LinkDB
All DBs
Position
9:12982684..12989459
Genome browser
AA seq
1005 aa
AA seq
DB search
MDHRLSRGSWVPVTGLVICLLLCACVVDLVLAQIRYSIPEELEHGAFVGNIAEDLGLDVA
KLSARRFRIVSGANKQYLEVNLENGILFVNEKIDREELCERSPSCFLHLQVVIENPLELY
RVEVEILDVNDNSPSFPWSEFNLDITESAAPGSCFPLESAQDQDVGTNSLRSYQLSANEH
FVLNIQTRNDGSKFAELVLDTPLDREQQKKHEMVLTAFDGGSPERSGTALITILVLDAND
NVPVFDRSVYRASLVENAPRGTLVLKLNATDLDEGSNGEVTYAFSGHAPLKVRELFSVDP
YTGEIRVKGIVDYEKASVFELYVQAKDRGPSAVAVHSKVLVDILDVNDNAPEVILTSVST
PVQEDAPPGTVIAVISVMDRDSGENGNVDCQIPNNVPFQLHSSFKNYYTLVTSEFLDRET
VSEYNITLTARDLGSPSLSTRKTVLVQVSDINDNPPRFSQPSYTVYVTENNAPGASICSV
TAFDPDSNQNAYLSYSILEGQIQGMPVSTYVSINSDNGNIYALRSFDYEQLRNFQILVQA
QDAGFPPLASNVTVNVFVLDQNDNSPVIVSPLPKNGTVATEVVPRSVDAGYLVTKITALD
ADAGQNSRLSYQVLQATDPGLFSVALYTGEIRTIRRLMEKDATRQRLVILVKDNGQPPLS
ATVSIVLTVVDSVPESLSDFGDLTLSPQPSSNLALYLIVSLSTISLIFLVAIIVLAAVKC
YKDRETISGYNLPPFACCCCGGFQPEPPPEVFKKSNLNLQISSAAKVPTNCMEVNGNGSL
SQSYCYKVCLTPESAKSDFMFLKPCSPGSTPRNNEAKCAENSWNAQSRSASVNNGATTPN
ELKQPNTDWTLTKNQNSSIKSYNSINMDGTLMRKAMHADPENYVTSMAPGQYWTWGTHMR
GMKEYKMSPSTSGVTSRPWTPRCTPPPPQQQQPSVPSHPPPHPPPDYHHNVYIPGTPSGF
CTLRPAAQRSELDVHNAFSTFGKKRRLQMSPQGEAAIINNDLYND
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atggatcacagactctccaggggcagttgggtaccggtgaccgggctggttatttgtctg
cttctgtgtgcgtgtgtagtggacctggttcttgcgcaaattcggtactccattccggaa
gagctggagcatggagctttcgttggcaacatcgccgaagacctgggcttggacgtggcc
aagctgtcagcccgtcggtttcgtatcgtctccggcgcaaataagcagtatttagaagtg
aacttggagaatggcattctcttcgttaacgagaagatagacagagaggaactgtgcgaa
cggagcccgagctgctttttacacttacaagtggtcattgaaaacccgttagaactatac
agagtggaagtggagattttagacgtaaacgacaactctcccagtttcccgtggagcgag
tttaatcttgacatcacagagtcggctgcgcccggctcctgcttcccgttagagagcgca
caggaccaggacgtgggcaccaactctctgcgttcctaccagctaagcgccaacgagcac
ttcgtgctaaatatccagacgcgcaacgatggaagcaagtttgctgagctcgtgctggac
accccactggaccgggaacagcagaaaaaacatgaaatggttctgacagcgtttgatgga
ggttcgccggaacgctctgggacagcattgataacaattttagtgttggacgcgaacgat
aacgtgcctgtgttcgaccgctcagtttaccgggcgagcctggtggagaacgcaccgagg
gggacgctggtgctgaagcttaatgccacagacctggacgagggctccaacggagaggtg
acctacgcgtttagcgggcacgcaccactcaaggtgcgagaactgttcagcgtggacccg
tacacgggtgaaatccgagtgaagggcatcgtagactacgagaaagccagtgtatttgag
ctttatgtgcaggcaaaggaccggggaccctctgcggtggcagtgcacagcaaagtgctg
gttgacatcctggatgtgaatgacaacgcgcccgaagtcatcctcacatcggtgtccact
ccggtgcaggaagatgcgccaccgggcacggtgattgctgttatcagtgtcatggaccgg
gattcgggagagaacgggaacgtcgattgccaaattccgaacaacgttccctttcagctc
cactcgtcatttaaaaactattatactctggtgacgagcgagtttctggacagggaaact
gtgtccgagtacaacatcaccctcacagcccgtgacctgggctctccttcgctctccacc
aggaaaacagtcctcgtccaagtgtctgacattaacgacaaccccccgcggttctctcaa
ccttcatacacagtttacgtgaccgagaataatgccccgggcgcttccatttgctctgtc
actgcattcgaccccgattctaaccagaacgcctatctgtcgtattctattctcgagggt
cagatccagggcatgcccgtgtccacttatgtctccatcaactccgacaacggcaatatc
tacgcactgcgctcttttgattatgagcaacttagaaactttcagatcctggtccaggca
caggacgctggtttcccccctctcgccagcaatgtcacagtaaacgtctttgtcttggac
cagaacgataattccccggttattgtatcaccgttgcccaaaaacggcaccgtggccaca
gaggtggttccacggtcagtagacgctggatatctggttaccaaaataacagcgctggac
gcggacgcagggcaaaactcccggctgtcgtatcaggtgctgcaggctacagaccctgga
ctgttcagcgtggctctctacacgggcgaaatcaggactattcgccggttgatggaaaaa
gatgcaacgaggcaaagactggtaatattagtcaaggacaacgggcagcctcctctctcc
gccaccgtctccattgtcctcacagtggtagacagcgtgcccgagtcactgtcagatttc
ggagacctcactctcagcccacagccttcctcaaacctcgccctctacttgatcgtatca
ttgagcaccatatcactaatattcctggtggctatcatcgtgctggccgcggtgaagtgc
tataaggacagggagaccatcagcgggtacaacctgccccctttcgcctgctgctgctgt
ggagggtttcagcctgagccgcccccggaggtgttcaaaaaatcaaacctcaacctccag
atttcatccgcggccaaagtgcccacaaactgtatggaggtgaatggaaacggcagcctc
tctcagtcatattgttataaagtgtgcctgacgcccgaatctgccaaaagtgactttatg
tttctgaagccgtgcagccctggcagcacaccgaggaacaacgaggcgaagtgcgcagaa
aactcgtggaacgcacaaagccgtagcgcatctgtgaacaacggagcaactactcccaat
gagctgaagcagccaaacacagactggactctcacaaagaatcagaactcctccattaaa
agttacaactctatcaacatggacggcaccctgatgcgtaaggccatgcacgcagacccg
gagaactatgtcacctccatggcacctggacagtactggacctggggcactcacatgaga
ggcatgaaagaatataagatgtctccctccaccagtggggtcacctctcgcccctggact
ccacgatgcacaccacctcctccccagcagcagcagccatcggtcccctcccaccctcca
ccacacccgccacctgactaccaccacaacgtatacatcccggggacgccatctggcttt
tgcaccctgaggcccgctgcacagcgaagtgagctggatgtccacaacgccttctccacc
tttggcaagaagcggcgtcttcagatgtccccccagggagaggctgcgattataaataat
gacttgtacaatgactga
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