Scophthalmus maximus (turbot): 118319178
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Entry
118319178 CDS
T09850
Symbol
etf1a
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-like
KO
K03265
peptide chain release factor subunit 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118319178 (etf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118319178 (etf1a)
03012 Translation factors [BR:
smau03012
]
118319178 (etf1a)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118319178 (etf1a)
Translation factors [BR:
smau03012
]
Eukaryotic type
Release factors
118319178 (etf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
118319178
NCBI-ProteinID:
XP_035505221
LinkDB
All DBs
Position
9:12916493..12923398
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AA seq
443 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFVSNDKVNVAGMVLAGSADFKTELSQSD
MFDPRLQAKVLKLVDISYGGENGFNQAIELSAEVLSNVKFIQEKKLIGRYFDEISQDTGR
YCFGVEDTLKALEMGSVEILIVYENLDTMRYILRVHGAESNGLENDEKTLYLTPEQEKDK
SHFTDKETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILR
YRVDFQGMEYQGEDDEFFDLDDY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagcgcggcggacaggaacgtggagatatggaaaatcaagaagctg
atcaaaagtttggaagctgcccgtggtaatggcaccagtatgatctcactcatcatccct
cccaaggaccagatatccagagtggccaagatgttggccgatgagtttggcactgcttcc
aacatcaagagccgagtcaacaggctctctgtactcggggccatcacctctgtgcagcaa
agactaaaactctacaacaaggtgccccctaatggtttggtcgtgtactgtggcaccatt
gtgacagaggaaggcaaggagaagaaagtcaatatcgactttgagccttttaagccaatc
aacacctccctgtacctttgtgacaacaagttccacaccgaggcattgacagcattgctc
tccgacgacagtaaatttggctttatcgtgatcgacggtagtggggcactgtttggcaca
ctgcagggcaacaccagggaggtgctgcacaaatttactgtggacctacccaagaagcac
ggcagaggagggcagtctgctctgcgttttgctcgtctgagaatggagaagaggcacaac
tatgtgagaaaagtggctgagactgctgtccagctctttgtgtccaacgacaaagtcaat
gtggcaggaatggtcttggccggctctgccgacttcaagaccgaactcagccagtcggac
atgtttgacccaaggttacaggccaaggttttgaaactggtggacatctcctacggagga
gagaatggtttcaaccaggctatcgagctctcagcagaggtcctctctaatgtcaagttc
atccaggagaagaagctcatagggcgatacttcgatgagatcagtcaggacacggggagg
tactgttttggtgtggaggacactctcaaagccctggaaatgggatcagtggaaatcctc
atagtctacgagaacttagacaccatgcgatatattctacgcgtgcatggggctgagagc
aacggattagagaacgatgagaagactttgtacttaacgccagagcaggagaaagacaag
tctcacttcacagacaaggagacagggcaggaacatgagctgattgagagcatgccactg
ctggagtggttcgctaacaactacaagaaatttggagccacgctggagatagtcacagac
aagagccaggaagggtcccagttcgtcaagggctttggaggcatcggaggtatattgcgg
tacagggtggatttccagggcatggagtatcaaggagaggacgatgagttctttgatttg
gatgactactag
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