Scophthalmus maximus (turbot): 118319272
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Entry
118319272 CDS
T09850
Symbol
tcirg1b
Name
(RefSeq) T cell immune regulator 1, ATPase H+ transporting V0 subunit a3b
KO
K02154
V-type H+-transporting ATPase subunit a
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau00190
Oxidative phosphorylation
smau01100
Metabolic pathways
smau04142
Lysosome
smau04145
Phagosome
Module
smau_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
118319272 (tcirg1b)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118319272 (tcirg1b)
04142 Lysosome
118319272 (tcirg1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118319272 (tcirg1b)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118319272 (tcirg1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
V_ATPase_I
Takusan
APG6_N
Motif
Other DBs
NCBI-GeneID:
118319272
NCBI-ProteinID:
XP_035505437
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Position
9:12533583..12541507
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AA seq
825 aa
AA seq
DB search
MGSMFRSEEVCLVQLFLQSGSAYNCVSELGELGLVEFRDLNPNVNAFQRKFVGEVRRCED
LEKTFTFLEQEINRSMSPSLHGPLPPPCPTPLAPQPRELITIEEECERLARELKEVSRNR
DSLRAQLTQLCQYRGVLTRTHSLTASQAPPPPALESQGLFDNRQDVHLSFVAGVVHPWKV
PSFERLLWRACRGYIIVDFREMEDRLEHPDTGEMVQWTVFLISFWGDQIGQKVKKICDCF
RTQTFAYPDNTTEREEILQGLEGRIEDIKSVLSQTEAFLQQLLMQAVAVLPQWKVRVQKC
KAIQMVLNLCSPSVTDKCLIAEAWCPVTKLPELQSALREGGRKSGSGVDSFYNRLPSSAP
PPTLFPLNSFTSGFQNIVDAYGVASYREVNPAVYTIITFPFLFAVMFGDVGHGLLMTLAA
LWMVLEEKDPKLRNNNNEIWRMMFGGRYLILLMGLFSVYTGAIYNECFSRGLSTFSSAWH
VGPMFENNIWNSSVLAGSEYLSMDPVVSGVFTSPYPFGIDPIWGMSNNKLSFLNSYKMKM
SVIIGIIHMTFGVCLSFFNYLHFGKISSVFFVLIPELFFIVSLFGYLVFMVVFKWIAYTP
AQSKIAPSILIHFIDMFLFSDNPDNPPLYGGQSVVQKVLVVLALCSVPVLLVGKPTYEYI
TFKRRRRQVEEDRRPLVADSGSINTQQGVVEGGADEEEFDAADVFIHQAIHTIEYCLGCI
SNTASYLRLWALSLAHAQLSEVLWVMVMRIALKWQGYVGSVVLFVIFAFFAILTVSILLV
MEGLSAFLHALRLHWVEFQNKFYSGTGYKLSPFSFSSLINESAAL
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatgtttcgcagcgaggaggtgtgcctggtgcagctcttccttcagtccggc
tcagcctacaattgtgtcagtgagctgggagagctgggtctggttgagttcagagacttg
aatcccaatgtgaacgcctttcagaggaagtttgttggtgaagtcagacgatgtgaagac
cttgagaaaacatttaccttcctggagcaggagatcaatcgctccatgtccccgtccttg
cacggtcccctccctcctccgtgcccgacacctttggcccctcagccccgcgaactcatc
accattgaggaggagtgcgagaggctcgccagagagctcaaagaggtgtccaggaatcga
gacagcctccgggctcagctgacccagctctgtcagtaccgaggtgtcctgacaagaaca
cactctctgacagcctcacaggcaccaccaccacctgcactggaaagccaaggcctgttt
gataaccgccaagatgtccacctcagttttgtggcaggagtcgtccatccttggaaggtc
ccctcatttgaacggttgctatggcgggcctgtcgaggttatattatcgtggatttcaga
gaaatggaggatcggctcgagcacccggacacgggggaaatggtgcaatggactgtgttc
ctcatttctttttggggagatcagattggacagaaagtcaagaagatatgtgattgtttc
cgcacgcagacatttgcataccctgataacactacagagcgggaggagattcttcaggga
cttgaaggcagaattgaagatattaagtcagtgctgtcacagactgaggccttcctgcag
cagctcctgatgcaggcggtggctgtgctgcctcagtggaaggtgcgtgttcagaagtgc
aaggccatccagatggtgctgaatctctgcagcccctccgtcactgacaagtgcctgatc
gccgaggcctggtgtcccgtcaccaagctgcctgaactgcagagtgctctcagagaggga
gggagaaagagcgggagtggggtcgactctttttacaaccggctgccgtcctccgctcct
ccaccgaccttgtttcccctcaactctttcacatctggtttccagaacatagttgatgcg
tatggcgtggccagctaccgtgaagtcaatccagcggtgtacacaataattacattcccc
ttcctgtttgccgtgatgtttggggacgtgggtcatggcttactgatgactctggctgcc
ctctggatggttctggaggaaaaggaccccaaacttaggaataacaacaatgagatatgg
aggatgatgtttggagggaggtatctgattctgctaatgggactgttctctgtctacacg
ggggccatttacaacgagtgcttcagcagaggcctcagcaccttcagctcagcgtggcac
gttggccccatgtttgagaacaacatatggaattcgtcagtcctggcagggagtgagtac
ttgtccatggatccggttgtgtccggtgttttcaccagcccttatccatttggcattgac
ccgatttggggcatgtctaacaacaaactgagtttccttaactcatacaagatgaagatg
tcagtcatcatcggaatcattcacatgacgtttggagtctgcttgtccttcttcaattac
ctgcactttggcaaaattagcagtgtgttctttgtgctgatcccagagctgttcttcatc
gtcagtctgtttggataccttgtgttcatggtggtcttcaagtggattgcctacactcct
gcccagtccaaaattgctcccagtatacttatccacttcatagacatgttcctcttctca
gacaaccctgacaacccgccactctatggcggacagtctgtggtgcagaaggtcctggtg
gtcttggctctgtgctccgtccccgtccttctggtcggaaagccaacgtatgaatacatc
acattcaagagaagacgacgccaagtggaggaagacagacgtcccctggtggctgattca
ggctccatcaacactcaacaaggggtggtggaaggaggagctgatgaagaggagtttgac
gctgcagacgtgttcatccatcaagccatccacaccatagagtactgcttgggctgcatc
tccaacactgcctcttacctccgactctgggctctcagtttggcacatgcacagctgtca
gaggtgttgtgggtgatggtgatgcgtattgccctgaagtggcagggctacgtgggatca
gtggtcctttttgtgatcttcgccttcttcgccattttgactgtctccattctgctggtt
atggagggcctgtcagctttcctccacgcgctgcgtctgcactgggtggagtttcagaac
aagttctacagtggaacaggatacaagctgagccctttctctttctcttctctgatcaat
gaatcggctgctttatga
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