Scophthalmus maximus (turbot): 118319330
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Entry
118319330 CDS
T09850
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118319330 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118319330 (atrx)
03036 Chromosome and associated proteins [BR:
smau03036
]
118319330 (atrx)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
118319330 (atrx)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
118319330 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
118319330
NCBI-ProteinID:
XP_035505531
LinkDB
All DBs
Position
9:complement(11273217..11304801)
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AA seq
2096 aa
AA seq
DB search
MSLVSSDSNLDQMAEKAEEPGSSTENMKPSSSRNKRKPSTAAKHTGLNESDASADSENEG
ATSDNPSDSNTGSTSKGTLVMRPAGNDNKGAMKLRVDFKQKHTDDTLQKKISCTACGKQV
NQFQPNSVYEHPALKVLICKSCYKYYTSDDISRDSDGMDEQCRWCAEGGKLICCDYCNNA
FCKKCILRNLGRKELSVITDENSKWHCYVCRSEPLLDLVSKCHSIMEKQELVQLKQRKPD
KPEEREIKRHKNKSVKEHKAVVNGKEHIEGSGTMTFSYKKLQVPKELIKKAKKLVETTTG
LNNTFIQFIQQAAEEQEDKAIRCRHLKAFKAVLVDLQKAHGALEAALEPEFRNMELQNGS
EGQHIARKTTTVAAPVENDHLDTLAGEAVEADAVDEEADAVDEEADAVNEEADGVNEEAD
AVDEEADAVDEADEADAVDAVDEADAAEKGDVAEEADAVEDADAVVEADAVDKADAAEEQ
HNEQEVNNDQVASEIEMKDSQTEIDVTKKTIKSEVCDDGLVSSGEMSLDHDIMSVPPSVP
EELFQMVESLADSTMLSQSDTDLITDTDARSNGKSTDSQRPQPKVKNLIVKLTPVPVVTT
CGSRSSRSKNREKERETQKKGKEKCEEEKASADTVDGANNPPPSRRSSRVKTTPLRKQAE
NKGKVESSESESEEESKDKAKSSKKSSKVKNEKEKQTKASEKKTEDSDSDEVPHILLEKA
AEVHSSDEEQGSTSAKKRLFKLNNTSTQDTDKASKRKRKSESSESDRENKSKKTSKKKKQ
NCSNSSNSDSEMKSKAGTAKRRSSRVKKQDEAKQDDKNSPERKAADRKRSYEKKRKGRSP
RNTSKLQSSSSDEEEEDCEGDSGEDSDEQKIKPLVEDGVVGGGRPFHQSSGDEGEDKDGA
SQICENDEDDDPENRIAKKMLLAQIKSNYSSGAESSSDNDGADKDEKSSKKVKKGDDDDD
DEDEEQQGDEDSEDSGSDVEVKKRGRRHKLLRHKLSLSEGESGEEKSSSKEKSKGGKKKA
GQKVDSDDSADSDFEKSESSEESGISEEVSESENDGKRPKTRSSKKKDEEKQRSYKQKKK
RRRIKVQDSSSSNEKSGEEDDDDPDGEGRKGRKKIRKILKDDKLRTETRDALKEEEDRRK
RIAEREALREKLREVIVVKESSQVTCPITTKLVLDEDEETKEPVLQVHRNLVTKLKPHQV
DGVQFMWDCCCESMKKIEKSSGSGCILAHCMGLGKTLQVVTFLHTLLLSEKLEFTTALVV
CPLNTVLNWLNEFEKWQNGMKDEESLEVTELATVKKPQERAYALQRWQEMGGVMIIGYEM
YRNLTQGRMIKSKKLKETFQKTLVDPGPDLVICDEGHILKNEASAVSKAMNSIRTRRRIV
LTGTPLQNNLIEYHCMVNFIKENLLGSVKEFRNRFINPIQNGQCADSTLFDVRIMKKRAH
ILYEMLAGCVQRKDYTALTKFLPPKHEYVLSIRVTPIQCKLYRYYLEHFTGVGNAVEGGR
GRAGTKLFQDFQMLSRIWTHPWCLQLDYISKENRGYFDEDSMEEFIASETEESSMSMTSE
DEKIKKKKKQGKGKKKGSDDSDSDDVEVIKEWNTSSRGKNGESRTRERPEPVEEPRPSGS
APGSPTADWHREFVVEADAEILEHSGKMTLLFEILRMAEEVEDKVLVFSQSLISLDLIED
FLELACRAKDEEKISPYKGEGKWFRNIDYYRLDGSTGATTRKKWAEEFNDTSNIRGRLFL
ISTRAGSLGINLVAANRVIIFDASWNPSYDVQSIFRVYRFGQLKTVFVYRFLAQGTMEEK
IYERQVTKQSLSFRVVDQQQIERHFTMNELAELYTFEPDLLDDPSEKKSKRATPMLPKDP
FLAEMLQNNKDQIACYHEHDSLLDHKEEEALSEEDRKAAWAEYEAEKKGLNMRNNYQTQY
AQMDMGNSSYFSYNVAALASMTNQQLEDLINQGRQKVIEATNALKTLSRESVEDTIARLW
KENPLLTESQVQSMALGRQASVELEVKRREAIYRDVLTRQQTLMMFVQKLITNRKVQEQQ
LAMANQASYLNQLAMQNGMMGAGGLSQMDLLGLYQQLHGLSSHQGMGKNPGPSKGL
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgagtctggtgtcttctgattcgaacctagaccaaatggcagaaaaagcagaggagcct
ggtagctcaacagaaaacatgaagccctcctcttctcgcaacaagaggaagccctctacg
gcagctaagcacaccggactgaacgaatccgacgcctcagctgacagtgaaaatgaaggt
gccacttctgacaatccttcagacagtaacacgggcagcacatctaaaggcactttggtg
atgaggccagctggtaatgataacaaaggtgccatgaagctcagggtggatttcaaacag
aaacatacagatgataccctgcagaagaaaataagttgcactgcctgtggaaaacaagtg
aatcagtttcagcccaattccgtgtatgagcatcctgcactcaaagtgcttatttgcaag
tcatgctacaagtattacacaagtgatgacatcagcagagactctgacgggatggatgag
cagtgcaggtggtgtgctgaaggaggcaaactcatctgctgtgactactgcaacaacgcc
ttctgcaagaagtgcattttacgcaacctgggcaggaaggagctttcagtcattactgac
gagaactcaaagtggcattgctatgtctgcaggtcggagcccctcctggatctggtctcc
aaatgccacagtatcatggaaaaacaagaacttgtgcaactcaagcaacgaaagccagac
aaaccagaggaacgtgagatcaagagacacaagaacaaatcagttaaagagcacaaagca
gttgtgaatggaaaagaacacatcgaaggctcagggactatgacgttttcctacaaaaaa
ctgcaggtacccaaagaacttataaagaaagcaaaaaagcttgttgaaaccacgactggt
ctcaacaatacattcatccagttcatacaacaggcagcggaggagcaggaagataaagct
atcaggtgtcggcatttgaaggccttcaaggccgtactcgtcgatttgcagaaagcccat
ggtgcgttggaggccgctttggagccggagttcagaaacatggagttgcagaatggtagt
gaggggcaacatattgcgagaaagacaactaccgttgcggcccctgtagaaaacgaccac
ttggatactttggcgggtgaagctgttgaggctgacgcagttgatgaggaggctgatgca
gtcgatgaggaggctgacgcagtcaatgaggaggctgacggagtcaatgaggaggctgac
gcagtcgatgaggaggctgacgcagtcgatgaggctgatgaggccgatgcagtcgatgcg
gtcgatgaggccgacgcagctgagaagggcgacgtagctgaggaggctgacgcagtcgag
gacgctgacgcagtggtggaggctgatgcagtcgataaggctgatgcagctgaggagcag
cataatgagcaggaggtgaacaatgatcaagtcgcaagtgagattgaaatgaaagacagc
caaacagaaattgatgtaaccaaaaagacaattaaatctgaggtctgtgacgatgggctg
gtgtcatctggtgaaatgtccttggatcacgacatcatgtctgtgcccccctcagttccc
gaagagctttttcagatggtggagagtcttgcggattccaccatgttgtcacagagtgac
acagatttgatcacagacactgatgcacggtcaaatggaaagtcaacagattctcaacgc
ccccagccgaaggtgaagaacctcatagtcaaattgactcctgtgccagttgtgactaca
tgtgggtcaaggtcctccaggtccaaaaacagagaaaaagaaagagagacgcagaaaaag
ggtaaagaaaaatgtgaggaggagaaagcctctgctgatactgttgatggggcaaacaac
ccaccaccaagccgtcgctctagtagagtcaagaccactcccttgaggaagcaggcagag
aacaagggcaaggtagagtcctctgagtcggaatccgaagaagaaagtaaggacaaggcc
aaatcctctaagaaatccagtaaagtcaaaaatgagaaagagaagcagaccaaggcttcg
gagaaaaagacagaggactctgactcagacgaagttccacatatactgctagaaaaagcg
gcagaagtccacagctcagatgaggaacaaggaagcacgagtgctaaaaagcgtttattc
aaactaaacaacacatccacacaggatacagacaaagcatccaaacgtaagaggaagtcc
gaaagctcagagtcagatcgggagaacaaaagtaaaaagacttccaagaagaagaaacaa
aactgctctaactcctccaactctgactcggagatgaagagtaaagcgggaacggcaaag
agaagatccagccgtgtgaagaaacaagatgaagcgaaacaggacgacaaaaactcacct
gagaggaaggcagcagatcggaaaaggtcttatgaaaagaaacgcaagggaaggagtccc
agaaacacctccaagctgcagtcctcctccagtgatgaggaggaggaggactgcgaagga
gactccggagaggacagcgacgagcaaaagatcaaacccctcgtggaggatggcgtggtg
ggaggcggtcgacctttccatcagtcctcaggagatgaaggggaagataaagacggagcc
tctcagatttgtgaaaacgatgaagacgacgaccctgaaaacaggattgcaaagaaaatg
cttcttgcccaaataaaatccaactattcttcgggagcagagagctcctctgataacgat
ggagcagataaggatgaaaagtcctccaaaaaagttaaaaaaggggatgacgacgacgac
gatgaagacgaagagcagcaaggcgatgaggattcagaagattcaggttctgatgtcgaa
gtgaaaaagcgcggccgacgccacaaattgcttcgtcataaactctcgctgagtgagggc
gaatccggagaagaaaaatcttcaagtaaagagaagagcaaagggggcaaaaagaaggca
gggcaaaaagtggacagcgatgactctgcagactccgactttgagaagtccgagtccagt
gaagagtcagggataagcgaggaggttagtgaatcagaaaacgatgggaagcgcccaaag
acaagatcttcaaagaagaaggatgaggagaaacagagaagttacaagcagaagaagaag
cgacgcagaatcaaagttcaggattcctcttccagcaacgagaagagtggagaggaagac
gacgacgacccagatggagagggtcgcaaaggacgcaaaaagatccgcaagatcctgaag
gacgacaagctgcggacagagacgagagacgcactgaaagaagaggaggacaggaggaaa
cgtatagctgaacgggaggcgcttagggagaaactcagagaggtgattgtggtgaaggag
tcttcccaggtgacgtgtcccattaccaccaagctggtgctggatgaggacgaagagacc
aaggagccagtgttacaggtgcacaggaaccttgtcacaaagctcaaacctcaccaggtc
gacggggtgcagttcatgtgggactgctgctgtgaatctatgaagaagattgagaagtct
tcaggctccggctgtatccttgcccactgtatgggcctgggaaagactctgcaggtggtg
acattccttcatactttgctgcttagtgagaagctggaattcaccacagctctggtggtt
tgtcccctgaacactgtcctgaactggctcaatgagtttgagaagtggcaaaacggaatg
aaagatgaggagagtttagaggtgactgagctggccacagtaaagaagccccaggagcga
gcgtacgctctgcagcgatggcaagaaatgggtggagttatgatcatcggctacgagatg
taccgaaacctgacgcagggcaggatgatcaagagcaagaagctcaaagaaacctttcag
aagacactggtagatccaggtccagacttggtgatctgcgatgaaggtcacatcctgaag
aacgaggcatctgctgtgtccaaagcgatgaactctatcaggacgcgaaggaggattgtg
ctgactggaacacctctgcaaaacaaccttattgaataccactgcatggtcaacttcatc
aaggaaaacctgcttgggtcagttaaggagttcaggaaccgcttcattaaccccattcag
aacggtcagtgtgccgactccacactatttgatgtccggatcatgaagaagagggctcac
atcctctatgagatgctggccggatgtgtccagaggaaggattacactgcgctcaccaag
ttcctgcctccaaaacatgaatatgtgttgtcgattagagtgactccaatccagtgtaaa
ctctacagatactatctggagcacttcacaggtgtggggaatgctgtggaggggggccgg
ggccgtgcggggacgaaactcttccaggatttccagatgctcagcagaatctggacccat
ccctggtgccttcagctggactacatcagcaaagaaaacaggggttactttgacgaggac
agtatggaggagttcatcgcctcagaaacagaagaatcctcgatgagcatgacctccgag
gatgagaagataaaaaagaaaaagaagcaagggaagggaaaaaagaagggatctgatgac
tctgacagtgatgatgtggaggtcatcaaggagtggaacaccagctctcggggcaaaaac
ggagagagcagaaccagagaaagaccagagccagtcgaagaacctcggccctccggctca
gcaccagggagtcccactgccgactggcacagggagtttgtcgttgaggctgacgctgag
attctagagcactctggaaagatgacgctcctctttgagatcctgcgcatggcagaggaa
gtggaagataaagtgttggtgttcagtcagtctctcatctctctggacctaattgaggat
ttccttgaactggcatgcagagcaaaagatgaggaaaaaatctctccatacaaaggtgaa
ggcaagtggttcaggaacattgactactatcggctggatggctccacgggcgccactaca
agaaagaagtgggctgaagagtttaatgacacaagcaacataagaggtcgtttgttcctc
atctcaacgcgagccggctcacttggcatcaaccttgtggcagccaacagggtcatcatc
ttcgatgcctcctggaatccgtcctacgacgtccagagcatcttcagagtctaccgcttt
ggccaacttaagaccgtcttcgtctatagattccttgcccagggtacaatggaggagaag
atttatgagcggcaggtaaccaagcagtctttgtcattccgggtggtggaccagcagcag
atcgagaggcactttacgatgaacgagctggccgagctctacacctttgagcccgacttg
ttggacgatccatcagagaagaaaagcaagagagccacacccatgctccctaaggatccc
ttcttggccgagatgctgcagaacaacaaggaccagattgcatgttaccatgaacacgac
tccctgctggaccacaaggaggaggaagccctgagcgaagaggatcgcaaggctgcctgg
gccgagtatgaagcggagaaaaagggtcttaatatgaggaacaactaccaaacgcaatac
gcccagatggacatgggcaactccagctacttctcctacaacgtggcggctttggcctcc
atgaccaaccagcagctggaggaccttataaaccagggacgacagaaagtcatcgaggca
acaaacgcattgaagactttatcaagggagtcggtggaggacacaatcgctagattgtgg
aaggagaacccgttgctcacagagagccaggtccagtcgatggcactaggacgccaggcc
agtgtggagttggaggtcaagcgcagggaagccatttacagggatgttctcaccaggcag
cagacgctgatgatgttcgtgcagaagctgatcaccaacaggaaggtgcaggagcagcaa
cttgccatggctaaccaggccagctacttaaaccagctggccatgcagaacggcatgatg
ggagccggcgggctcagccagatggacctgctggggctttaccagcagctccatggcctg
agctctcaccaaggcatgggcaagaaccctgggccctccaagggcctgtag
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integrated database retrieval system
