Scophthalmus maximus (turbot): 118319360
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Entry
118319360 CDS
T09850
Symbol
pcdh12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118319360 (pcdh12)
Cell adhesion molecules [BR:
smau04515
]
Cadherins
Protocadherins
118319360 (pcdh12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
DUF5527
Motif
Other DBs
NCBI-GeneID:
118319360
NCBI-ProteinID:
XP_035505598
UniProt:
A0A2U9C7B1
LinkDB
All DBs
Position
9:25631457..25647936
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AA seq
1184 aa
AA seq
DB search
MLLALLLVLRLCSEARSFEPSSITIQYRVWEEQLAGTQVGRLLDDLRQRDEGGPLEDFQV
VEHGKALPFSVSARDGVVSTQGRLDREELCRGSDLCEVAFSVLYRKSGAVNCLRVRVEVM
DLNDHGPSFPSPLQEVEISETASLRMRIPLDRAVDPDAGPNSLQTYSLSVNQHFALDVTV
GPDGSKQAELVIIKELDREVQTSFDLTLVAWDKGNPPKSGSTLVRVNIQDSNDNSPTFED
GTPTVELPEDTARGTTIINLKATDPDQGANGEVEYSLSKHTRPEVQRLFYVDPQSGSVSL
RAPLDYEAQTSYEVIIQARDRGPNAIPSHCKLHVKLRDVNDNAPRIHMTWTPPNSPVATV
LEGAPEDTFLALVMVSDADSGDNGKVRAHIQKGSGPFRLKRIHGDNYMIVTNGSLDREKV
MQYNITLLAQDYGDPPLSCVKQLPVQVLDENDNAPVFSTSLYKASFKENNLAGYHALKVE
AHDVDLELSGRVSYFIHNSNDLESDTQSFSIHPTSGVISIQRPLDYEESNNYSFIVEAVD
HGHPPLTSTATVQVDIEDMNDNYPVIKEPKPRNGVVSLSVPVNADKGEIVTELGNGMEEA
TTDFTVNNFVREGLVGFLASSIKAEDPDSGLNGEVQYLITQGNDYGLFWLDEATGQLFVN
TTNATELIGKTYKVDVAVSDMGTPSLVTRVTLEVTFINLKDHLKNSSPGNRGQLSFTMMI
AICLGATCLLLLLAIALVTTFCRPEKRDNRAYNCRQAESTYTRHPRRPQKNIRKSDIQLI
PVIRGRKEEPSEDDSEAQPLAPPPVMSEDQQTERQYTLTPSVMNTSFHSQGYPEGEASQP
VAHHCRTLRKPGNIELDGTLPLTPATSYRTLRKSRNTSSTSSVSHSSTLKRPAHREGDEA
EPPCSGSQATLRRPKTSEGQGAHDAEHRQMLRNLVRLSMAAFGDSIELSSASPEVQQISQ
LLSLLRQGQLQPRTNFRGNKYSHRNGRYGGQDCSDWQSTKDSGHGESEAGDVDWEPGRDS
PIDPQLEEGLNNLLNNPDDVFSEVDDPAWMARLSLPLTGDYHDNVFVPTGPPSPESELPP
RDRLDSSSFSTFGKTPEKDGPLGGALLSEVSTLFEMLMTQKADAHPGPRPDVLYRLSAAY
RRSLGLDAAGGGGGGVSPAAGNAPRSSGNTEKRPGLNAPSGLYQ
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcgctctgcttctggttctgcgtctttgctctgaggctcgctcctttgagccg
tcatcaatcaccatccagtaccgggtttgggaggagcagctggcggggacgcaggtcggc
cggctgttggatgacctccggcagagggacgaaggtgggcccctggaggatttccaagtg
gtggaacacgggaaggcccttcccttctccgtcagcgctcgagacggggtcgtctccacc
caaggccggctggacagggaggagctgtgcagggggtccgacctgtgcgaggtggccttc
agcgtcctctacaggaagagcggcgccgtgaactgcctgcgggttcgtgtggaggtgatg
gacctgaacgaccacggccccagcttccccagtcctctgcaggaggtggagatctcggag
acggccagcctgagaatgcggatccctctggaccgggcggttgatcccgacgcggggccc
aacagcctccagacctactcgctgtccgtcaaccagcacttcgctctggatgtgacggtt
ggtcccgatgggtcaaaacaagcagagctggtgatcattaaagaactggatagggaggtt
caaacctccttcgacctcaccctggtggcgtgggataaagggaacccccccaaatctggc
agcacattagtccgtgttaacattcaggactcaaacgataacagtccgacgtttgaggac
ggcactcccaccgtggagcttccagaggacacagcccgagggacaaccatcatcaacctg
aaggccactgacccggaccagggtgccaatggtgaagtggagtattcgctcagtaagcac
acgcgaccggaggttcagaggcttttctacgtggatccgcaaagtggatcggtgagtctc
agagcaccgctggactacgaggcccagacctcttacgaagtgattattcaggcccgtgat
cgtgggcccaacgccatcccctcgcactgcaaactgcacgtcaagctcagagatgtcaac
gacaacgcaccgaggatacacatgacctggactccgcccaactcacctgtggcgacagtg
ctggagggagcgccggaggacacttttctcgctctggtgatggtttctgatgcagattcg
ggagacaacggcaaagtgagggcacatattcaaaaaggatccggccctttccgcctcaag
cgcatccacggtgacaattacatgattgtgaccaacggcagcctggaccgagagaaggtc
atgcagtacaacatcacgctccttgcccaggattacggagatcctcctctgtcttgtgtt
aaacaactgcccgtccaggtcctggatgagaatgacaacgccccagtgttctccacctcc
ctctacaaggcctccttcaaggagaacaatcttgcaggctaccatgctctcaaagttgaa
gcccatgatgttgacctggagctcagtggaagagtttcctacttcatacacaactccaac
gacctggagagtgacacacaatctttctccatccacccgactagtggtgtcataagcatc
cagcgccctctggactacgaggaatccaacaactactcttttatcgtggaggccgtcgac
cacggtcacccacctctcaccagcactgcgactgtgcaggtcgacatcgaggacatgaac
gacaactaccctgtcatcaaggagccaaaacccagaaatggtgtggtgtctttgagtgta
cccgtcaatgcagacaagggggagatagtgaccgaactgggtaacggcatggaggaggca
acaaccgattttacagttaataactttgtcagagagggacttgttggattccttgcatcc
tccataaaggctgaagaccccgactcggggctcaatggagaagtccagtacctcatcact
caggggaacgactacggactcttctggttggacgaggctacaggccagctgtttgttaac
accaccaatgccactgagctcattgggaaaacctataaggtggacgtagctgtctcggac
atggggactcccagtctggtcaccagagtgactctggaggtgactttcatcaacctcaag
gaccatctgaagaactcgtcacctggtaaccgtggacagctgagtttcaccatgatgata
gccatctgccttggcgctacatgcctgctgcttctgttggccatcgccctggtgacgacg
ttctgccgccctgagaaacgagacaaccgcgcttacaactgcagacaggcagaatcgacc
tacacccgccatcctcggcgtccgcagaagaacatcagaaagtctgacattcagctgatt
cccgtcatccgggggcggaaggaggagccttccgaggacgacagcgaagcccagccgctg
gctccgcctcctgtgatgtcagaggatcaacaaacagaaaggcagtatacattgacgcca
tcggtcatgaacacaagcttccattcccaaggctacccagaaggggaagcctctcaacct
gtggcccaccactgcagaacccttcggaaacctggaaacattgaactcgatggcactctg
cctctgacacccgccacctcttaccggacgcttcggaaatccaggaacacttcgtcgacg
tcttcagtctcacattcgagcaccttaaagcgcccggctcaccgtgaaggggacgaggca
gagccgccatgttcggggtcccaggcgactctcaggaggccgaagacctcggaggggcag
ggggcccacgatgcagagcaccggcagatgctgcgaaacctggttcggctttccatggct
gcgttcggagactccatcgagctttcctcggcctccccggaggtgcagcagatctcccag
ctcctctccctcctccgtcagggtcaactgcagcccaggacaaacttcagagggaacaag
tattctcatcgtaacggcagatatggaggtcaggactgttccgactggcagagcaccaaa
gacagtggacacggcgaaagcgaagccggagacgtggactgggaaccggggagagactca
cccatagacccccagctggaggaggggctcaacaacctgctcaacaaccctgatgacgtc
ttctcagaggtcgacgaccccgcctggatggccagactctccctgccgctcaccggcgat
taccatgacaacgtgtttgtccccactgggcctccgtcccctgaaagtgagcttcctccc
cgggaccgcctggactcctcgtccttctccaccttcggtaaaaccccggagaaggacggc
ccactgggcggggccctcctgtccgaggtcagcacgctgtttgagatgctgatgacccag
aaggccgacgcccacccggggcctcgaccggacgtcctgtaccgcctctctgcggcgtat
cgccgctcgctgggcctggacgccgcgggcggcggcggcggcggcgtctcacctgccgcg
ggaaacgctccaaggagctctgggaacactgagaagcggccgggcctgaacgcaccgtcg
ggactttaccaatag
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