Scophthalmus maximus (turbot): 118319461
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Entry
118319461 CDS
T09850
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04120
Ubiquitin mediated proteolysis
smau04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118319461 (syvn1)
04120 Ubiquitin mediated proteolysis
118319461 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118319461 (syvn1)
Enzymes [BR:
smau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118319461 (syvn1)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118319461 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
118319461
NCBI-ProteinID:
XP_035505755
UniProt:
A0A8D3AQ24
LinkDB
All DBs
Position
9:complement(6597276..6607371)
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AA seq
640 aa
AA seq
DB search
MVRAALVTATSLALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGTLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHFRVLSLMGLLAVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYVLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNPTPAPAQAPPPAPAAPANAP
AAPPVNVAPGMLPGFPPGIFPFWGPFPAVPPPPPPPAGAAAGEAPGATDAPHSSTEATQA
AGTSQPTSSTADTSAAAAAPGSAIPGFPFSFPPPPFPTAPWLPMPPPPPFVSSMPPPPPS
LARMSEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLTPPRAEGST
GEASGTNPSASSPAAGSSTESPSQETDSPSLDQVNGATVSSQPADSTSAALETERKEKMD
DEAAEDDDVDGGEPSAAELRRRRLRKLESASSSSSPPPDN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggtaagagcagccttggtgactgccaccagcctggcgctgactggggccgtggtggca
cacgcttacctcctcaaacaccagttctacccaactgtggtctacctcaccaagagcagc
cccagcatggcggtgttgtacattcaggcctttgtgctggtgtttctgctgggcaagttc
atgagaaaggtcttttttggaacgctgagagctgcagaaatggagcacctcatcgagcgc
tcctggtatgccgtcaccgagacctgcctggcgttcaccgtgttcagggacgacttctcc
cctcgcttcgtcgccctcttcaccctcctgctcttcctcaagtgcttccactggctggcc
gaggaccgggtggactttatggaacggagtcctaacatctcctgggtttttcactttaga
gtattgtctctcatgggactgctggctgtgctggacttcctgtttgtcaaccatgcctgt
cacagcatcatcaccagaggagcctctgtacagcttgtttttggatttgagtacgccatc
ctgatgaccatggtgctgacgaccttcatcaagtacgttctgcacaccgtcgacctgcag
agtgagaacccctgggacaacaaggccgtctacatgctctacaccgagctcttcacaggt
ttcatcaaagtgctcctgtacatcgccttcatgaccatcatgataaaggtccacaccttc
cccctatttgccattcgccccatgtatctggctatgaggcaattcaagaaggctgtaaca
gatgccataatgtctcggagagccatccgcaacatgaatacactataccctgatgctact
cctgaagatctgcaggcttccgacaacgtgtgcattatctgtcgggaggaaatggtcact
ggagccaagaaactaccctgtaatcacattttccactccagctgcttgcgctcgtggttc
cagcggcagcagacctgtcccacctgtcgcatggacgtcctccgagcttccaacaacaat
ccgactcctgcaccggcccaggctccgccccctgctccggccgcgcccgccaatgcgccc
gcagccccgcctgttaacgtggctccaggtatgttaccgggcttccctcccggcatcttc
cctttctggggtcccttccctgcagtgcctcctcctcctccccctcccgctggtgctgca
gcaggtgaagctcccggggcaactgatgctccacacagcagcacagaagccacacaggca
gctggcaccagccagcccacatcgtccactgcagacacctctgcagcagcagctgctcca
ggatcagcgatcccaggcttccctttctccttcccccctcctcccttccccaccgcacca
tggctgccaatgcctccacctcctcccttcgtgtcgtcgatgcctccccctcctccgtct
ctagcgcggatgtccgaggaggagctccgggagctggaggccgagggccggcggggcctc
gaggcccgactccagtgtctccagaacatccacacactgctggacgccgccatgctcaac
atccaccactacctcagcaccgtcgccacactcactccgcctcgggctgaaggcagcact
ggagaagccagtgggacaaacccctctgcgtcgtcccctgcagctggcagcagcacagag
agtcccagccaggagacggactctcccagcttagatcaagtgaacggtgccacggtctcc
tctcagcccgccgactccacctctgctgccttggaaacggagaggaaagaaaagatggac
gacgaagcagctgaggacgacgacgtcgacggcggagaaccgagcgctgccgagctgagg
cgccggcgcctccgcaaactggaatcggcctcgtcgtcgtcatcgccccctccggacaac
tga
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