KEGG   Scophthalmus maximus (turbot): 118319480
Entry
118319480         CDS       T09850                                 
Symbol
pdgfc
Name
(RefSeq) platelet-derived growth factor C
  KO
K05450  platelet derived growth factor C/D
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau04010  MAPK signaling pathway
smau04020  Calcium signaling pathway
smau04510  Focal adhesion
smau04518  Integrin signaling
smau04540  Gap junction
smau04810  Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:smau00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    118319480 (pdgfc)
   04020 Calcium signaling pathway
    118319480 (pdgfc)
  09133 Signaling molecules and interaction
   04518 Integrin signaling
    118319480 (pdgfc)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    118319480 (pdgfc)
   04540 Gap junction
    118319480 (pdgfc)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    118319480 (pdgfc)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:smau04052]
    118319480 (pdgfc)
Cytokines and neuropeptides [BR:smau04052]
 Cytokines
  Growth factors (RTK binding)
   118319480 (pdgfc)
SSDB
Motif
Pfam: CUB PDGF
Other DBs
NCBI-GeneID: 118319480
NCBI-ProteinID: XP_035505790
LinkDB
Position
9:complement(20602653..20643398)
AA seq 361 aa
MIRTVPSTAPCDRPPPLIQMILPFLCLLASLLQHYGSGAESSHVTKFHLPSVKEQNGVQD
SHQEKIITVSGEGMVQSPDFPRQYPRNTVLTWRLVAPSNMWIQLTFDERFGLEDPEDGIC
KYDFVEIEELTEKTILGRWCGSQSVPTCQTAEGAQIRIRFVSDEYFPSEPGFCIRYSLLP
VRASGPQAPAVVAPSLQGIEDLSEAVAGLSTVEEVMKYLEPERWQLDMEELYKPTWHVLG
KSFIHNKKARGGADLNLLREDVRLYSCTPRNFSVSLREELKRTDAIFWPSCLLVKRCGGN
CACCSHRCYDCQCVPARVTKKYHEVLLLKHRSGGRGLQKSMTDVPLEHHEECACVCNDDW
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgatacgaaccgtcccgtctacagcgccctgcgaccgcccgccaccactcatccaaatg
atccttccatttctctgcctccttgcatcgcttctccaacactatggctcgggagctgaa
tcaagtcacgtcaccaaattccaccttccaagtgtaaaggagcaaaacggagtgcaagat
tcccatcaggagaagatcataacagtgtccggggaggggatggtccagagcccagacttc
ccgcgtcagtatcccaggaatactgtgttgacctggagactagtggcaccgagcaacatg
tggatccagctcacctttgacgagcggtttggtctggaggaccctgaagatggcatatgc
aagtacgactttgtggagatagaggagctgaccgagaagacgatcctgggccgttggtgc
gggtcgcagtcggtgccgacctgccagactgccgagggcgctcagatcaggatccgcttc
gtctccgacgagtactttccctccgagccgggattctgcatccgctactccctcctgccg
gtgagagcatcgggaccacaagctcctgccgtcgtcgctccatccctgcagggtatcgag
gatctgtcggaggccgtggccgggctgagcaccgtggaggaggtcatgaagtacctggag
ccggagcggtggcagctggacatggaagagttgtacaaacccacgtggcatgtgctgggc
aaatccttcattcataataagaaagccagaggaggggccgatctcaatctgttgagagag
gacgtccgcctgtacagctgcacgccgcgcaacttctccgtgtccctgcgcgaggagctg
aagaggacagatgccattttctggccaagctgcctcctggtgaagcgctgcggtggaaac
tgcgcctgctgctcgcaccgctgctacgactgtcagtgtgtccccgccagggtcacaaag
aaataccacgaggttctcctgctgaaacaccggagcggcggacgcggcctgcagaagtcc
atgactgacgtgcccttggagcaccacgaggagtgcgcctgtgtgtgtaacgacgactgg
gactga

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