Scophthalmus maximus (turbot): 118319604
Help
Entry
118319604 CDS
T09850
Symbol
arid2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118319604 (arid2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118319604 (arid2)
03021 Transcription machinery [BR:
smau03021
]
118319604 (arid2)
03036 Chromosome and associated proteins [BR:
smau03036
]
118319604 (arid2)
Transcription factors [BR:
smau03000
]
Eukaryotic type
Helix-turn-helix
ARID
118319604 (arid2)
Transcription machinery [BR:
smau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118319604 (arid2)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
118319604 (arid2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Pox_D5
Motif
Other DBs
NCBI-GeneID:
118319604
NCBI-ProteinID:
XP_035506012
LinkDB
All DBs
Position
12:11794330..11826813
Genome browser
AA seq
1643 aa
AA seq
DB search
MANSTGKNLLDQRRKGQAFLDELRQFHQSRGSPFKKIPIVGGRELDLSALYVRVVALGGF
AKVSDKNQWLELGDEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEAPPGNPKA
SLPIGAIPNYYNYQQHVVSDYLRQSYGLSTDFVPPCDYNKLVLSLLSGLPNEVDFAVNVC
TLLSNESKHAMQLDKDPKLVTLLLAHAGVFDDSLGSFSGVFGMDWKEKTSRDFVRFWKEV
VEDTEVRELIWDKGSSAQDGTSSAQRWQSLFHPPRNLGISDMEAQRVLQIAVILRNLSFE
EANVKLLAANRTCLRFLLLCAHCNLISLRQLGLDTLGNVAAELQLDPVDFRTTHLIFHTI
TKCLLSRDRFLKMRAMEILGNLSKAEDNGVLICEYVDQDSYREVMMLLTLPDLMLLMASL
EVLYLLAQLGEIPCSKIASVDRSIDLLVRLVSVDLHTFGPDALTAVRLIEHQASADQAAE
VRPQLVEQVPATAQGAPAPATRTSVQSTQPPPGIVELDGEKFTLQWLNAHFETNTEGSVS
RSEVYSEYLATCSKMGRSNILNSTGFLKCLRTVFPNHTMRRQDEPKANGQVQILLVGLRR
RSIPLPIQLYYQQQHPAATPTPPGAPGDPQAPTSGLPPGIPILGPQFIRVPGLSTAPSIA
LTAQEPAHSSHLTVPRHPLSPSPLAAVQQQQQVRPCPSAPATQNHSPQNPAAQQHSPMLP
TGTPVTLFQQVPQGHILTARVQGVCPPITQHPPLSQTPPQAESQCVAAASTSSPPIQVGG
CQALSITGVPNSQGSRVAFQNIAPKPAPNQSGGLASTISTQNQQAQSVVIVSPSPQQSPA
YTPAIHQIVLTNPSTIPGVQTIQIAGQPGAASSPCPPPSSHSNTQIQPNQTVSHALSMKR
LQQQHQQQQPQLQIISQTPPSQPTSTESSLIKQLLLPKRGPSTPGGKLILPAPQVPPPNS
TIAPSPQVVYQAGYSTQNPSPQPLNVQLVPGQLPAAGAPALQTVQLLPGQLISTSSPGAA
TIIQGPTTAGQVTFTVVPNTGFTTSTAAVAAVSQGAVAPVAPPPPFSTGTVPHHTPAAPP
PPTPLPAPLRGDKIICQKEEEAKDATGLHIHERKIEVMENSSVAGGDSSHGKTSNGDVAA
GAKLLNGRKCMESNLPPHHSGNSQGALNGPAVESHPANGKQALSPGLNNPLEGNTDPKKT
LVNGVCDFDRVDNGGNLNKNIPNHIASKQYLGNGEVDPSVKSHGSPLPCPPPPQQDTAKA
QLAERLANGPHAVGNRFPSELTNGPLGLGGHAVLRQQLLPNSSLPSTVTITSQSLAACPA
NGVASEARGLKRPAESEDRSAGAVCSGIPNKVGVRIITISDPNNAGSSATMVAVPAGTDP
STVAKVAIENATQQRNCSAAETAGSKPTITPSPPPVSQPAPVGNHSPHLPAQQTSAAPPP
PEQSRKAGQNFKCLWQSCKRWFETPSQVFYHAATQHGGKDAYGGHCQWEGCEPFPRQRLS
FITHLQDKHCSREALLAALKVEEQKAQSPNQTSSQTPPAAGSPSAQRAPKAIVNHPSAAL
MALRRGSRNLVFRDFTDEKEGPVTKHIRLTAALTLKNIAKHSDCGRMLVKRHETHLSVLA
LSNMEVSTTLAKCLYELTRSLQA
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggcaaattcgacggggaaaaatctactagatcagcggaggaagggacaggctttcctg
gacgagctgcggcaattccaccagagcagagggtcgcctttcaagaagatccccatcgtg
ggtgggagagagctggacctgagcgcgctctatgtcagagtcgtcgctttgggtggattt
gctaaggtctcggacaaaaaccagtggctcgaactcggagacgagttcaactttcccagg
agctgctccaacgctgcgttcgctttaaaacagtactaccttcgatacttggagaagtat
gagaaagtccaccacttcggcgaggacgatgacgaagcaccgccggggaatcccaaagcc
tctcttccaatcggtgcaattcccaactactataactaccagcaacacgttgtatcagac
tatctccgccaaagctatggactgtctacggatttcgttccaccgtgtgactataacaaa
ctggtgctgtctctcctttcgggcctacccaacgaggtggactttgctgttaacgtttgc
actctgctttccaacgagagcaagcatgccatgcagctggacaaggaccccaaattggtc
acgttgctgctggcccacgccggcgtcttcgacgactcgctaggcagcttctccggggtg
ttcgggatggactggaaggaaaaaacctcccgggactttgtcaggttctggaaagaggtg
gtggaggacactgaagtcagggagctgatctgggacaagggcagctcagcacaagatggt
acgtcgagtgcgcagcgctggcagagcctcttccacccgccgcggaacctgggcatcagc
gacatggaggcccagcgggtgctgcagattgccgttatcctgcgaaacctctccttcgag
gaggccaatgtcaagctgctggcggccaaccgaacgtgcctgcgcttccttttgctctgt
gcccactgtaacctcatctctctccgacagctcggactggacacgctgggcaacgtggct
gccgagctccagctggatcctgttgactttcggacgactcacctgatctttcacaccatc
accaaatgcttgctgtccagggaccggttcctcaaaatgagagccatggagatcctgggc
aacctcagcaaggcggaggacaacggggtgctaatctgcgagtatgtggaccaggactcg
tacagggaggtgatgatgctcctcaccctgcccgacctcatgctcctcatggcctccctg
gaggtgctgtacctgctggcccagctcggagagattccctgcagcaagatcgcctctgtc
gaccgcagcatagacctgttagtgcggttagtatcggtcgatcttcacacgtttggaccc
gacgccctaacagcggtgcggctgatcgagcatcaggccagtgctgaccaggcggccgag
gttcgaccacagctggtggagcaggtacctgccaccgcgcagggagcaccggcacctgca
acaaggacctcggttcaatccactcaaccaccacctggaatcgttgaactcgatggggag
aaattcacactgcagtggctaaacgcacactttgagaccaacaccgagggctccgtgtct
cggtcagaggtgtactccgagtacctggccacgtgcagtaaaatgggacgcagcaacatc
ttgaactccaccggcttcctcaaatgtctgcggactgtgttccccaaccacacaatgagg
cggcaggatgagccaaaggcaaacggccaggttcagatccttctggttgggctaaggcga
aggtcgatccccctgcccatccagctgtactaccagcagcaacatccggcagcaactcct
acacccccaggagcacctggagaccctcaggccccgacatcaggcttgcctcccgggatt
cccattcttggaccccagtttatccgggtccctggcctcagcaccgccccatccatcgcc
ttgactgcacaggaacctgcccattcaagccacctgactgtccctcgtcacccgttatca
ccaagtcctctggcggcggtgcagcagcagcagcaggtccgcccttgtccatcggcacca
gccacccagaaccatagccctcagaaccccgcggctcagcaacactcccccatgctcccc
acggggacgccagtcacactatttcagcaggtaccacagggccatatcctcactgccagg
gtacaaggcgtgtgccccccaatcacccagcaccctcccctgtctcaaactcctccccag
gcggaatcgcagtgtgttgctgcagcgtcgacgtcctcccctcccatccaggtgggtggt
tgtcaggcgttaagcatcacgggtgtgcccaattcccaggggtcacgtgttgcatttcag
aacatcgcccccaagccggcgccgaaccagtcaggtggactggcatccacgatatccact
caaaaccagcaggcgcagagtgtagtaatagtcagccccagcccccagcagagcccagcc
tacacccctgcaatccaccagatcgttctcaccaacccctccaccattcccggtgtccag
actatccagatagcagggcagcctggagctgcttccagcccctgcccgccaccttcctct
cactccaatacccagatccagccaaatcaaactgtcagccacgcactgtccatgaaacgg
cttcaacagcagcatcaacaacagcagccacaactccaaattatttcccagactcctccc
tctcaacctacctccactgagtccagcttgatcaaacagctgctgcttccaaagcgtggg
ccttctacgccgggaggaaagctcatccttcctgctccgcaggtgccccctcccaacagc
acgatagcccccagtccacaggtcgtctaccaggcaggctacagcacgcagaacccctct
cctcagccgctcaatgtccagctggttcctggccagcttcctgctgcaggagctccagcc
ctccagacggtccagctcttgccaggccagctcatttctacgagtagccccggggcagct
accataatccagggccccacaacagctggacaagtcacattcaccgtggtccccaacact
ggcttcaccacctctactgctgctgtcgccgctgtcagccagggtgctgtcgctccagtc
gctccccctcctccattctctactggaacggtgccccaccacaccccagcagctccgcca
ccaccaacgccactgccagcaccccttagaggagacaagatcatttgtcaaaaggaggag
gaggcaaaggatgccactgggctgcatatccacgagaggaagatagaggtgatggagaac
tcctctgtggcaggcggagactcctcccatggcaaaaccagtaacggcgatgttgcggca
ggtgcgaagctactcaacggtcggaagtgcatggagtctaatctacctccacaccactca
gggaatagtcagggggcactcaatggcccggcagtggagagccaccctgcgaatgggaag
caggcactctcccccggcctgaacaaccctctggagggcaacaccgaccccaaaaagact
ctagtcaacggcgtgtgtgactttgaccgggttgacaatggcggcaacttaaacaaaaac
attccaaatcacatcgcttccaaacagtacttggggaacggggaagtggacccatctgta
aagagtcacggctcccctctcccttgtcctcctcccccccagcaggacactgccaaagcc
cagctggccgagcgcttggccaacggaccccatgcagtaggcaataggtttccctcggaa
ttaaccaatggacctttggggctcggcggccacgctgtgctaagacagcaactgctccct
aactcctccctcccctccactgtcaccattacctcccagagtctcgctgcctgtccggca
aacggtgtggcctctgaggcccggggcctcaagaggccggccgagagcgaggaccgcagc
gcaggggcggtgtgctcgggaatccccaataaggtgggagtgcggatcatcaccatcagt
gaccccaacaatgccggcagcagtgccactatggtggcagtgccagcaggaacagaccca
agcacagtagccaaagtagcaatagagaacgccactcagcagaggaactgctccgccgca
gagacagctggctcgaagccgaccataaccccatctccgccccctgtatcccagcccgca
ccagtgggtaaccacagccctcacctcccagcacagcaaacctctgcagcaccaccacca
ccagagcaaagcaggaaagcggggcagaactttaagtgtctgtggcagtcctgtaaacgg
tggtttgaaacgccatctcaggtgttttaccacgcagcgacgcaacacggtggaaaggac
gcatacggcggccattgtcaatgggagggatgtgaacctttcccccggcagagactgtct
ttcatcacgcatctacaggataagcactgttcccgagaggctttgctcgcggcactcaaa
gtagaggagcaaaaggcacaaagtcccaatcagacttcttcccagactccaccagcggca
ggcagtccttcagcacagcgagcaccgaaagcaatcgtcaatcatccgagcgcagctctc
atggccctacgcagaggctctcgaaacctggtcttcagggacttcactgatgagaaagag
ggaccagtgaccaaacacatacgacttactgctgccttaacgttaaagaacatcgccaag
cactccgactgtggacgcatgttggtgaagaggcacgagacgcacctctctgtgctggcg
ctaagtaacatggaggtttccaccacgctcgccaaatgcctttatgaactgacgcgctcg
ctccaggcataa
DBGET
integrated database retrieval system
