Scophthalmus maximus (turbot): 118319701
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Entry
118319701 CDS
T09850
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
smau03000
]
118319701 (ssrp1a)
03036 Chromosome and associated proteins [BR:
smau03036
]
118319701 (ssrp1a)
Transcription factors [BR:
smau03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
118319701 (ssrp1a)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
118319701 (ssrp1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
SSrecog
Rttp106-like_middle
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
PDU_like
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
118319701
NCBI-ProteinID:
XP_035506153
LinkDB
All DBs
Position
9:14017114..14030682
Genome browser
AA seq
718 aa
AA seq
DB search
MGDTLEFNEIYQEVKGSWNDGRLRFSKQSVVYKNSKTGKVDSISASDINQATWRRVCLGH
GIKLGTSTGNVYKYDGFRDTDFERISEFFKANYKLELTEKDMCVKGWNWGTAKFSGPLLS
FDVNDNAAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPSQTDERQDPVE
AFAENVLTKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEENITLTLNMSEEDVERRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGKIDEYSDSDEDQHDAYLERMKAEGKIREEGNDSDESDGGSD
ESFNPGEEDDDIAEEYDSNASASDSSEDGDDSEDDGAKKKKPVKKPKVVKEKKERKPRKE
KKQKDTGGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLGKDEKEEWDT
KAGEAKRQYDIAKKEYKESGGGSTSSSKKESKKSAGKKDEKKRKPAGGDKDKERGGGGGG
GANDSFKSREFIPTSESSSDSDHKSKSKKSKRSKSKKESDEEEEEAVSTPASSEEESD
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactggagttcaatgagatctaccaggaggtcaaaggctcttggaacgac
gggcggctgcgtttcagcaagcaaagcgtggtttacaaaaacagcaagacggggaaggtg
gatagcatctctgctagcgacatcaaccaggccacatggagacgtgtgtgtttaggtcac
ggcatcaaactgggcaccagcacaggaaacgtctacaaatatgacggcttcagggacacg
gactttgagaggatctctgagtttttcaaggctaactacaagttggagctgacggagaag
gacatgtgtgtgaagggctggaactggggaacagccaagttctccgggccactgttatca
ttcgatgtaaacgataatgctgcgttcgagatcccactgtccaacgtctcccagtgtgcc
acggggaagaatgaagtcactctggagttccaccagaatgacgacacagaggtgtccctc
atggaggtccgattctacgtccctcccagccagactgatgaacgacaagaccctgttgaa
gcgtttgctgagaatgtgttgactaaggctgacgtgatccaggccacaggagacgctgtg
tgtatcttcaaagagctgcagtgtcttacgcccagaggaaggtatgacattcgtatctac
ccaacgttccttcacctccacggtaagacctttgactacaagattccctacaccactgtc
cttcgtctcttcctgctgccacacaaggaccagaggcagatgttctttgtgatcagtttg
gatcctcccatcaagcagggtcagacacgttatcacttccttatcctgctcttctccaag
gaagagaacatcaccctcaccctcaacatgagcgaggaggatgtggagcgtcgctttgag
ggcaaactcagtaagaatatgtcggggtccctgtacgagatggtcagcagggtgatgaag
gctctggtcaaccgcaagatcaccgtgcctgggaacttccagggtcactctggggctcag
tgtatcacctgctcctacaaggcgtcctcgggcctcctctaccctctggagaggggcttc
atctatgttcacaagccgcctgtgcacctgcgcttcgaggagatctcctgtgtgaacttc
gcccgaggaaccaccaccacacgttccttcgactttgagattgagaccaagcaaggaaac
cagtacaccttcagcagcatcgagagagaagaatacggcaaactgtttgactttgttaac
gccaagaagctcaacatcaagaacagagggttcaaagagaagaagggcatgaagggtaaa
attgatgagtacagcgactcagacgaagaccagcacgatgcctacctggagaggatgaag
gctgaaggcaaaatcagagaagagggtaacgacagcgacgaatcagacggtggaagtgat
gagtcgtttaaccctggagaagaagatgatgacattgcagaagagtacgatagcaatgcc
tctgcaagtgacagcagcgaagacggggacgacagcgaagatgacggtgcgaagaagaag
aaaccggtcaagaaacctaaagtggtgaaggagaaaaaagaaaggaaaccacgcaaagag
aagaagcagaaagacacgggcggccccaagaggccgatgagtgcctacatgctttggctg
aactccagtcgtgaacgaatcaagtcagagaatccaggcatctccatcactgagatctcc
aagaaggctggagagatgtggaggcaactgggaaaagacgagaaggaggagtgggataca
aaggctggagaggccaagaggcagtacgacatagcaaagaaagagtacaaagagagtggt
ggcggatcaacctctagttccaagaaggagagtaaaaaatctgcaggtaaaaaagacgag
aagaagaggaagcccgccggtggagacaaggacaaggagcggggaggaggaggaggagga
ggagccaacgacagcttcaagagccgcgagttcatcccgaccagcgagagttcatcggac
tccgaccacaagagcaagagcaagaagtccaagaggtccaagtccaagaaggaatcggat
gaagaggaggaagaggctgtgtccactcccgctagctcggaggaagagtccgactaa
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