Scophthalmus maximus (turbot): 118319770
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Entry
118319770 CDS
T09850
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K16499
protocadherin delta 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118319770 (pcdh19)
Cell adhesion molecules [BR:
smau04515
]
Cadherins
Protocadherins
118319770 (pcdh19)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
PepSY
Motif
Other DBs
NCBI-GeneID:
118319770
NCBI-ProteinID:
XP_035506277
EnsemblRapid:
ENSSMAG00025011626
LinkDB
All DBs
Position
9:17305118..17357255
Genome browser
AA seq
1096 aa
AA seq
DB search
MQTKEMEIIQLIAVLLLFWVGAEAVINLKYGINEEMKPGSVIGNVTKDALKQGFQIAPQP
PYLRVISNSEPRWVELSPAGILTTQMKIDRDVVCRQNPKCVISLEVMSNSMEICVIKVEI
EDLNDNAPRFPTSHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGSKIAELVVQKSLDRETQSHYAYEISAEDGGDPPKIGAVQLNIKVIDSNDNNPVFD
EPVYTVSVMENSPINTLVIDLNATDPDEGPNGEVVYSFNSYVTEKTRDAFKIDPRTGIIT
VNGVLDYEAIQIYEIDVQAKDLGPNSIPAHCKVTVNVMDTNDNPPVISLLSLNTEMVEVS
ENAQRGYVIALVRVSDKDSGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQKDTY
NLTIQAEDSGTPPLRATKSLVVKVTDENDNPPHFLKPHYQEMVMENNLPGSCLLAVSAED
PDLGMNGTVSYSIVPGEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDNGN
PSLSSNATVRIVVLDVNDNTPVMTNPPLVNGTAEVSIPRNAGVGYMVTQVKADDYDEGEN
GRLTYTISEGDRAFFEIDQVNGEVRSTRMFGENAKSTYEITVVARDHGKPSLSASAYIVV
YLSQDLNAQEPIGPVNLSLIFIIALGSIAAILFVTMIFVAVKCKRDNKEIRTYNCSFFYL
RRVAEYSYGNQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSL
PLGCRRSESTFLNVENQNSRNAAPNHGYQHPFTGQSHQQPDLIINGMPLPETENYSIDSS
YVNSRAHLIKRPPCSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYVDTAVNDVLNM
TVPPNVCQLPDQDPSEGFHCQDECRILGHSDRCWMPRVPARAKSPEHARNVIALSIEATT
VDVPHYEDGSTKRTFATFGKDGPEDVERGELKGKRTQESHVCSPKANGGAVREAGNGREA
ASPITSPVHLKSPMSKPSSAYNTLKCRDAERIANHSLLRQPEGKDSEPSVREINTLLHDG
RDKESPSSKRLKDIVL
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaaggagatggaaataatacaattaattgctgtgctgctcttattttgggtc
ggggctgaggctgtcatcaacctaaagtatggaataaacgaggaaatgaagcccgggtca
gtgatcgggaacgtgaccaaggacgcactgaagcaaggatttcagatcgcgccgcagccc
ccgtacctacgagttatctccaattcagaaccacgatgggtggaactcagtccggccgga
atcctcacaacccaaatgaaaatagaccgggacgtagtttgtcgacagaacccgaagtgt
gtcatttccttagaagtgatgtcaaactccatggagatctgtgtcatcaaagttgagatc
gaggatctgaacgacaacgcaccccgattccccacgagccacattgacattgagatctcg
gagaacgcctcccctggtacgaggtttcccctagagggggcaagcgacccggactcgggg
atctttggagtgcaatcgtactccatcactccaaatgagctgttcggactagaaataaag
accagaggggatgggtccaaaattgctgagctcgtcgtgcaaaaatcgttagacagggag
acgcagtcgcactatgcatatgaaatcagcgcagaagacggaggagaccctcccaagata
ggcgcggtccagttgaacatcaaggtgattgattcgaatgacaacaaccctgttttcgat
gagccagtgtacacggtcagtgtgatggagaattcccccataaatacgttggtcatagac
ttgaacgcaacggatccagacgagggccctaacggagaggttgtgtactcgttcaacagt
tacgtcaccgagaaaacgagggacgcgtttaaaattgaccccagaaccgggatcatcacc
gtcaacggtgttttggattatgaggcgatacaaatatacgagatcgacgtccaggctaaa
gatttaggtcccaactccatcccggcccactgcaaagtcacagtgaatgtgatggacacg
aacgacaacccacctgtcatcagtttactctcactgaacacggagatggtggaagttagt
gaaaacgcgcagcgtggatatgtcattgcgctggtgagggtgtccgataaggattctggg
gcaaatggcaaagtgcagtgcaggcttcagggcaatgtcccattcagactgcaagaatat
gaaagcttctccaccatactagttgatggcaggctggacagggagcagaaggacacatac
aacctgaccatccaagctgaggacagtggcacccctcctctacgcgccacaaaatccctg
gtagtcaaagtcacggatgagaatgacaaccctccccacttcctcaagccacactatcag
gagatggtgatggaaaacaacctccctggttcgtgtctgctggcagtgtcagcagaagac
ccggacctggggatgaatggcacagtttcatactccatagtccctggtgagattaagcac
atggatgtaaacacatatgtcagcataaacccatcaggccgcatttactccatgagatca
ttcgaccacgaatacaccaggacttttgatttcaaagttttggccagagacaatggtaac
ccctcattgtcaagtaacgccacggtgcgtattgtggtgctggacgtcaacgacaacacg
ccagtgatgacaaacccccctctggttaatggcacagctgaggtttccatccccagaaac
gctggggtgggctacatggtgacccaagtgaaagcagacgactatgatgagggggagaac
gggcggctcacctacaccatctcagagggggaccgggctttcttcgaaatcgaccaggtg
aacggggaagtgcgctccaccaggatgtttggggaaaacgccaaatccacctacgagatc
acagtggtggcgagggaccacggcaagccctccctctccgcctcagcctacatcgtggtg
tacctctcacaagacctgaacgcgcaggagcctatcggacctgttaacctgtccctcatc
ttcatcatcgccctgggctctatcgccgccatcctgtttgtcaccatgatttttgtggct
gtgaagtgcaagcgggataataaggagatccggacatacaactgcagtttcttctacttg
cgcagggtggcggagtactcatatggcaaccagaagaagtccagcaagaagaagaagctg
agcaagaacgacatacgcctggtgccacgagacgtcgaggaaacagacaagatgaatgtg
gtgagttgctcgtctctcacctcctcgctcaactacttcgactaccaccagcagagcttg
ccactgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcacgc
aatgcagcgcccaaccatggctatcagcacccgttcactgggcagagccaccaacagcca
gacctcatcatcaacggcatgccactgccagagacggagaattattccattgactccagt
tacgtgaacagcagagcccacctcattaaaaggcccccatgtagcacgtcaacgttcaag
gacctggaggggaacagtctgaaggacagtggtcacgaggagagcgaccagaccgacagt
gaacacgatgtccagagaggacactatgttgacacggctgtcaatgatgtgctgaacatg
accgtcccccccaatgtctgccagctgcctgaccaagatcccagcgagggctttcactgc
caggacgagtgtcgcatcctgggccactctgaccgctgttggatgcctcgtgtcccagca
cgtgccaagtcacctgagcacgcccgtaatgtcatcgctttgtctatcgaggccaccaca
gtggatgtaccccactatgaagatggcagcaccaagaggacttttgccaccttcggcaag
gatgggcctgaggacgtggagcggggagagctaaagggaaagcggactcaggagtctcat
gtgtgcagccccaaggcgaatggtggagctgtacgcgaagctggcaatgggcgtgaggca
gcaagccccatcacctcccctgtgcacctgaagagcccaatgtccaagccgtcatctgcc
tacaacacactgaaatgccgcgacgcagagcgaatcgccaaccacagcttgctgcggcag
ccggaggggaaggacagtgagccgtctgtcagggagatcaacacgctcctccacgatggc
cgagacaaggaatcccccagcagcaagcgcctgaaggacattgtgctttag
DBGET
integrated database retrieval system