Scophthalmus maximus (turbot): 118319827
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Entry
118319827 CDS
T09850
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
KO
K16499
protocadherin delta 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118319827 (pcdh10b)
Cell adhesion molecules [BR:
smau04515
]
Cadherins
Protocadherins
118319827 (pcdh10b)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Ustilago_mating
Motif
Other DBs
NCBI-GeneID:
118319827
NCBI-ProteinID:
XP_035506398
EnsemblRapid:
ENSSMAG00025010378
LinkDB
All DBs
Position
9:423598..440074
Genome browser
AA seq
1021 aa
AA seq
DB search
MIVLVVVLCITNGVLAQIRYSVPEEADHGTLVGNIAEDLGLDLTKLASRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDREQICKQSVSCQLNMEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYTVSLPE
NAPVGTLVIQLNATDLDEGLNGEIVYSFSNHISSRVKDLFSIDPRTGRVEVRGEVDFEES
SLYQIFIQAKDLGPNAVPAHCKVLVKVNDLNDNAPEITFSTVTESVSERAAPGTVIALLS
VTDHDAEENGQVNVEVLGDVPFKLKSSFRNYFTIVTDAPLNREQAESYSVTVVARDKGTP
SLTTSKSIRVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDTDVGQNALISYS
ILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQARDAGTPELSTNATVKV
IIVDQNDNAPLVLAPLGKNGTAREPLPRTAEPGYLVTRIVAMDGDDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSAKRDPHQLYDLLIEVRDHGQPPLSSSASVLVVLVDSVAE
SHGGADRGGAAKAKDGTLDLTLILIIALGSVSFIFLLVMIVLAVRCQKDKKLNFYTCLTS
DCCLSCGACCSQQGRARKKKLSKSDIMLVQSAVNVSGAGTAQVPVEESGSFGSHHQNQNY
CYQVCLTPESAKTDLMFLKPRSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSSETK
HQRAELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSSGADLFSN
CTEECKALGHSDRCWMPSFMPSDGRQGADYRSNLHVPGMDSVPDTEVFESPEQTADKSFS
TFGKETPLSHHHHHHHLHHHLLQNHQLSHQHSSLERKELEAFLPSSRAPCSPAHLTRKRV
C
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgattgtgcttgtggttgtcctgtgcatcacgaatggagtgctcgcccagatacgctac
tctgtgccggaggaggcggaccatggcaccttggtggggaatatcgccgaagacctgggt
ctggaccttaccaaactggcctctcgccgcttccaagtggtgcccagctcccgcacgccg
tacctggaggtgaacctggagaacggcgtcctgtttgtcaacgagaaaatcgaccgggag
cagatctgcaagcagagcgtcagctgccagctcaacatggaagtgttcctggagaacccg
ttggagctgtttcgggtcgaaatcgaggtggtggacatcaacgacaacccccccagcttc
ccggagacggacatcacggtggagatctcggagagcgccactccgggcacccgcttcccg
ctggagagcgcgttcgacccggacgtgggctccaacgcattacgcacgtacgacatcacc
acgaacaactacttttacctggacgtgcagacccaaacggacggaaacaagttcgcggag
ctggtcctggagaagccgctggaccgagagcagcaggcggcgcacaggtacgtgctgacc
gcggtggacggcggtcagccgccccggactggcaccgcgctgctggtggtcaaagtgctg
gactctaacgataacgtgccggtgtttgaccagcccgtgtacacggtgagcctcccggag
aacgcgccggtgggcacgctcgtcatccagctgaacgccaccgacctggacgaggggctg
aacggggagatagtttactccttcagtaaccacatctccagccgcgtaaaggacctgttc
agcatcgacccgcgtaccgggcgcgtcgaggtgcgcggggaggtggatttcgaggagagc
agcctctatcagatcttcatccaggctaaagacctggggccgaacgccgtgcccgcacac
tgcaaagtgctcgtcaaagtcaacgacctgaacgacaacgcgccggagatcaccttcagc
accgtcaccgagtcggtgagcgaaagagcggcgcccggcaccgtgatcgcgctgctcagt
gtgacggaccacgacgcggaggagaacggccaggtcaacgtggaagtcctcggcgacgtc
ccgttcaaattaaaatcctcattcaggaattatttcaccatagtgaccgatgcgccgttg
aaccgggagcaggcggagtcctactcggtcacggtggtggcgcgggacaaggggacaccg
tcgctcaccaccagtaagtccatccgcgtccaggtgtccgacgagaacgacaacgcgccc
accttcacgcagcccatatatgatgtgtatgtgacggagaacaacgtgccaggggcgtac
atccacgcggtcacggctctggacacggacgtcgggcagaatgcgctcatcagctactcc
atactagagtgtgacatccagggcatgtcggtcaaaacctatgtgtcgatcaacgaggag
acgggctacctgtacgcactcaggtcctttgactacgagcagctgaaggatttcaccttc
atggtccaggcccgagacgcgggcaccccggagctgtccactaatgccacggtcaaagtc
atcatcgtggaccaaaacgacaatgccccgctggtcttggcgccgctggggaagaatggc
accgccagggagcccctgccccgcacagcggagccgggctacctggtgacccgcatagtg
gcgatggacggggacgacggcgagaacgcacgcctctcctacagcatccagagggggaac
gagaacggcatgttccggatggactggaggacaggtgagctccgcacagcgcggcgggtg
tcggccaagcgagacccccaccagctgtacgacctgctgatcgaggtgagggaccacggc
cagccgccactgtcctccagcgccagcgtgctggtggtgctggtggacagtgtggccgag
agccacggcggcgcggacagaggcggcgccgccaaggccaaagatggcaccctggacctc
acgctcatcctcatcatcgccctgggctccgtctccttcatcttcctgctggtcatgatc
gtgctggccgtgcgctgccagaaggacaagaagctcaacttctacacctgcctgaccagc
gactgctgcctgagctgcggcgcgtgctgctcgcagcagggccgcgcgcgcaagaagaag
ctcagcaagtccgatatcatgctggtgcagagcgcagttaacgtgagcggagccggcacc
gctcaggtgcccgtggaggagtcggggagcttcggctcccaccaccaaaaccagaactat
tgctaccaggtatgtctgactccagagtccgccaaaaccgacctcatgttcctaaagccg
cgtagtccgtctcggagcacagacaccgagcacaacccgtgcggggccatagtgacaggg
tacacagaccagcagcctgacatcatatcaaacggcagcatattatcgagcgagaccaaa
caccaacgagctgaactcagctacctggttgacaggccacgacgtgtcaacagttcggcg
ttccaggaggcggacctggtgagctccaaagacagtggccatggagacagcgagcaggga
gacagcgaccacgacgccacgaatcgaggccattcctccggtgccgatctgttctccaac
tgcacggaggagtgcaaggccctgggccactcggatcgctgctggatgccgagcttcatg
ccctccgacgggcgccagggtgcggactaccgcagcaacctgcacgtgcccggcatggac
tctgtccccgacacagaggtatttgaaagccccgagcaaacggccgataagtcattctcc
acctttggcaaagagacgcccctcagtcaccaccaccaccaccaccacctccaccaccat
cttctccaaaaccatcagctcagccaccagcacagctcgctagagaggaaagagttggag
gcgtttctgcccagctccagagcgccgtgtagcccggctcatttaacgaggaaaagggtt
tgctag
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integrated database retrieval system