KEGG   Scophthalmus maximus (turbot): 118319827
Entry
118319827         CDS       T09850                                 
Symbol
pcdh10b
Name
(RefSeq) protocadherin-10b isoform X1
  KO
K16499  protocadherin delta 2
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:smau04515]
    118319827 (pcdh10b)
Cell adhesion molecules [BR:smau04515]
 Cadherins
  Protocadherins
   118319827 (pcdh10b)
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Ustilago_mating
Other DBs
NCBI-GeneID: 118319827
NCBI-ProteinID: XP_035506398
EnsemblRapid: ENSSMAG00025010378
LinkDB
Position
9:423598..440074
AA seq 1021 aa
MIVLVVVLCITNGVLAQIRYSVPEEADHGTLVGNIAEDLGLDLTKLASRRFQVVPSSRTP
YLEVNLENGVLFVNEKIDREQICKQSVSCQLNMEVFLENPLELFRVEIEVVDINDNPPSF
PETDITVEISESATPGTRFPLESAFDPDVGSNALRTYDITTNNYFYLDVQTQTDGNKFAE
LVLEKPLDREQQAAHRYVLTAVDGGQPPRTGTALLVVKVLDSNDNVPVFDQPVYTVSLPE
NAPVGTLVIQLNATDLDEGLNGEIVYSFSNHISSRVKDLFSIDPRTGRVEVRGEVDFEES
SLYQIFIQAKDLGPNAVPAHCKVLVKVNDLNDNAPEITFSTVTESVSERAAPGTVIALLS
VTDHDAEENGQVNVEVLGDVPFKLKSSFRNYFTIVTDAPLNREQAESYSVTVVARDKGTP
SLTTSKSIRVQVSDENDNAPTFTQPIYDVYVTENNVPGAYIHAVTALDTDVGQNALISYS
ILECDIQGMSVKTYVSINEETGYLYALRSFDYEQLKDFTFMVQARDAGTPELSTNATVKV
IIVDQNDNAPLVLAPLGKNGTAREPLPRTAEPGYLVTRIVAMDGDDGENARLSYSIQRGN
ENGMFRMDWRTGELRTARRVSAKRDPHQLYDLLIEVRDHGQPPLSSSASVLVVLVDSVAE
SHGGADRGGAAKAKDGTLDLTLILIIALGSVSFIFLLVMIVLAVRCQKDKKLNFYTCLTS
DCCLSCGACCSQQGRARKKKLSKSDIMLVQSAVNVSGAGTAQVPVEESGSFGSHHQNQNY
CYQVCLTPESAKTDLMFLKPRSPSRSTDTEHNPCGAIVTGYTDQQPDIISNGSILSSETK
HQRAELSYLVDRPRRVNSSAFQEADLVSSKDSGHGDSEQGDSDHDATNRGHSSGADLFSN
CTEECKALGHSDRCWMPSFMPSDGRQGADYRSNLHVPGMDSVPDTEVFESPEQTADKSFS
TFGKETPLSHHHHHHHLHHHLLQNHQLSHQHSSLERKELEAFLPSSRAPCSPAHLTRKRV
C
NT seq 3066 nt   +upstreamnt  +downstreamnt
atgattgtgcttgtggttgtcctgtgcatcacgaatggagtgctcgcccagatacgctac
tctgtgccggaggaggcggaccatggcaccttggtggggaatatcgccgaagacctgggt
ctggaccttaccaaactggcctctcgccgcttccaagtggtgcccagctcccgcacgccg
tacctggaggtgaacctggagaacggcgtcctgtttgtcaacgagaaaatcgaccgggag
cagatctgcaagcagagcgtcagctgccagctcaacatggaagtgttcctggagaacccg
ttggagctgtttcgggtcgaaatcgaggtggtggacatcaacgacaacccccccagcttc
ccggagacggacatcacggtggagatctcggagagcgccactccgggcacccgcttcccg
ctggagagcgcgttcgacccggacgtgggctccaacgcattacgcacgtacgacatcacc
acgaacaactacttttacctggacgtgcagacccaaacggacggaaacaagttcgcggag
ctggtcctggagaagccgctggaccgagagcagcaggcggcgcacaggtacgtgctgacc
gcggtggacggcggtcagccgccccggactggcaccgcgctgctggtggtcaaagtgctg
gactctaacgataacgtgccggtgtttgaccagcccgtgtacacggtgagcctcccggag
aacgcgccggtgggcacgctcgtcatccagctgaacgccaccgacctggacgaggggctg
aacggggagatagtttactccttcagtaaccacatctccagccgcgtaaaggacctgttc
agcatcgacccgcgtaccgggcgcgtcgaggtgcgcggggaggtggatttcgaggagagc
agcctctatcagatcttcatccaggctaaagacctggggccgaacgccgtgcccgcacac
tgcaaagtgctcgtcaaagtcaacgacctgaacgacaacgcgccggagatcaccttcagc
accgtcaccgagtcggtgagcgaaagagcggcgcccggcaccgtgatcgcgctgctcagt
gtgacggaccacgacgcggaggagaacggccaggtcaacgtggaagtcctcggcgacgtc
ccgttcaaattaaaatcctcattcaggaattatttcaccatagtgaccgatgcgccgttg
aaccgggagcaggcggagtcctactcggtcacggtggtggcgcgggacaaggggacaccg
tcgctcaccaccagtaagtccatccgcgtccaggtgtccgacgagaacgacaacgcgccc
accttcacgcagcccatatatgatgtgtatgtgacggagaacaacgtgccaggggcgtac
atccacgcggtcacggctctggacacggacgtcgggcagaatgcgctcatcagctactcc
atactagagtgtgacatccagggcatgtcggtcaaaacctatgtgtcgatcaacgaggag
acgggctacctgtacgcactcaggtcctttgactacgagcagctgaaggatttcaccttc
atggtccaggcccgagacgcgggcaccccggagctgtccactaatgccacggtcaaagtc
atcatcgtggaccaaaacgacaatgccccgctggtcttggcgccgctggggaagaatggc
accgccagggagcccctgccccgcacagcggagccgggctacctggtgacccgcatagtg
gcgatggacggggacgacggcgagaacgcacgcctctcctacagcatccagagggggaac
gagaacggcatgttccggatggactggaggacaggtgagctccgcacagcgcggcgggtg
tcggccaagcgagacccccaccagctgtacgacctgctgatcgaggtgagggaccacggc
cagccgccactgtcctccagcgccagcgtgctggtggtgctggtggacagtgtggccgag
agccacggcggcgcggacagaggcggcgccgccaaggccaaagatggcaccctggacctc
acgctcatcctcatcatcgccctgggctccgtctccttcatcttcctgctggtcatgatc
gtgctggccgtgcgctgccagaaggacaagaagctcaacttctacacctgcctgaccagc
gactgctgcctgagctgcggcgcgtgctgctcgcagcagggccgcgcgcgcaagaagaag
ctcagcaagtccgatatcatgctggtgcagagcgcagttaacgtgagcggagccggcacc
gctcaggtgcccgtggaggagtcggggagcttcggctcccaccaccaaaaccagaactat
tgctaccaggtatgtctgactccagagtccgccaaaaccgacctcatgttcctaaagccg
cgtagtccgtctcggagcacagacaccgagcacaacccgtgcggggccatagtgacaggg
tacacagaccagcagcctgacatcatatcaaacggcagcatattatcgagcgagaccaaa
caccaacgagctgaactcagctacctggttgacaggccacgacgtgtcaacagttcggcg
ttccaggaggcggacctggtgagctccaaagacagtggccatggagacagcgagcaggga
gacagcgaccacgacgccacgaatcgaggccattcctccggtgccgatctgttctccaac
tgcacggaggagtgcaaggccctgggccactcggatcgctgctggatgccgagcttcatg
ccctccgacgggcgccagggtgcggactaccgcagcaacctgcacgtgcccggcatggac
tctgtccccgacacagaggtatttgaaagccccgagcaaacggccgataagtcattctcc
acctttggcaaagagacgcccctcagtcaccaccaccaccaccaccacctccaccaccat
cttctccaaaaccatcagctcagccaccagcacagctcgctagagaggaaagagttggag
gcgtttctgcccagctccagagcgccgtgtagcccggctcatttaacgaggaaaagggtt
tgctag

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