KEGG   Scophthalmus maximus (turbot): 118319830
Entry
118319830         CDS       T09850                                 
Symbol
smu1a
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
smau  Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:smau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:smau03041]
    118319830 (smu1a)
Spliceosome [BR:smau03041]
 Complex B
  Other components
   Complex B specific factors
    118319830 (smu1a)
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd WDR55 EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 LisH_TPL Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_RIG_2nd Ge1_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_Nup120_160 WD40_MABP1-WDR62_1st Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_BBS7 Beta-prop_VPS8 WD40_RFWD3 Beta-prop_DCAF12 Beta-prop_WDR75_2nd Beta-prop_IP5PC_F VPS8_N PROPPIN WD_LRWD1 LisH zf_topless TFIIIC_delta DUF7165 Beta-prop_IFT122_2nd LisH_PAC1
Other DBs
NCBI-GeneID: 118319830
NCBI-ProteinID: XP_035506405
LinkDB
Position
9:23206188..23212180
AA seq 513 aa
MSLEVESADVIRLIMQYLKENNLHRTLVTLQEETTVSLNTVDSIESFVADINSGHWDTVL
QAIQSLKLPDKTLVDLYEQVVLELIELRELGAARSLLRQTDPMIMLKQTQPERYIHLENL
LARSYFDPREAYPDGSSKEKRRAAIAHALAGEVSVVPPSRLMALLGQSLKWQQHQGLLPP
GMTIDLFRGKAAVKDVEEERFPTQLSRHIKFGQKSHVECSRFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMDDAVLCMGFSRDTEMLATGAQDGKIKVWKIQSGQCLR
RFERAHSKGVTCVSFCKDSSQLLSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTPD
GHHIISASSDGTVKVWNMKTTECSNTFKPLGTSAGTDITVNNVILLPKNPEHFVVCNRSN
TVVIMNMQGQIVRSFSSGKREGGDFVCCTLSPRGEWIYCVGEDFVLYCFSTVTGKLERTL
TVHEKDVIGIGHHPHQNLIGTYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctctggaggtggaatccgcggacgtgattcgtctgatcatgcagtacctgaaggag
aacaacctgcaccggacgctggtcaccctgcaggaggagaccaccgtgtccctgaacacc
gtggacagcatcgagagcttcgtggccgacatcaacagcggccactgggacacggtgctg
caggccatccagtctctcaagctgccggacaagaccctggtagatctgtacgaacaggtt
gtgttggagctgatagagctgagagagctgggcgctgctcgttcgctcctccgacagacg
gaccccatgatcatgctgaaacaaacccagccagagagatatatccacctggagaacctg
ctggctcgctcctacttcgaccccagagaggcgtatccagacggcagcagtaaggagaag
cgccgggcagccatcgcccacgccctggctggggaggtcagcgtggtgcccccctctcgt
ctcatggctctgctgggacagtcactgaagtggcagcagcatcagggtctcctgcctcct
ggtatgaccatcgacttgttcaggggcaaagctgcggtgaaggacgtggaggaggagcgt
ttccccacgcagctcagcagacacatcaagttcggacagaagtctcatgtggagtgttcc
cgcttctcccctgacggtcagtacctggtcaccggctccgtggacggcttcatcgaggtc
tggaacttcaccacgggcaaaatccgaaaggatctgaagtaccaggctcaggacaatttc
atgatgatggacgatgccgtgttgtgtatgggcttcagtcgggacacggagatgttggcc
accggagcccaggacggaaagatcaaggtgtggaagatccagagcggtcagtgtctgagg
agattcgaacgtgcccacagtaaaggtgtgacgtgcgtcagcttctgtaaagacagcagc
cagctcctcagtgcctccttcgaccagaccatcagaatccacggactgaagtcgggcaag
actctgaaggagttccgaggtcactcgtccttcgtcaacgaggccacgttcactcccgac
ggccaccacatcatcagcgcctcctctgacggtacagtgaaggtgtggaacatgaaaacc
accgagtgctcgaacaccttcaaacctctgggcacgtcggccggcaccgacatcacggtc
aacaacgtcatcctgctgcccaagaaccccgagcactttgtcgtgtgcaaccgctccaac
acggtggtcatcatgaacatgcagggacagatcgtgaggagcttcagctccggtaagagg
gaaggcggcgacttcgtgtgctgcacgctgtcgccccgcggcgagtggatctactgcgtg
ggcgaggactttgtgctctactgcttcagcacagtcaccggaaaactggagagaacactg
acggtgcacgagaaggacgtgatcggcatcggccaccacccgcaccagaacctcatcggc
acctacagcgaggacggcctgctgaagctctggaagccttga

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