Scophthalmus maximus (turbot): 118319859
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Entry
118319859 CDS
T09850
Name
(RefSeq) protocadherin-1-like
KO
K16498
protocadherin delta 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
118319859
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
smau01009
]
118319859
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118319859
Protein phosphatases and associated proteins [BR:
smau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
118319859
Cell adhesion molecules [BR:
smau04515
]
Cadherins
Protocadherins
118319859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_FAT4_N
Cadherin_2
Fibulin_C
PDGLE
Motif
Other DBs
NCBI-GeneID:
118319859
NCBI-ProteinID:
XP_035506449
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All DBs
Position
9:23936207..23942946
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AA seq
712 aa
AA seq
DB search
MPSSHHTTFCSPTDPGVAANRRKIRVKSGLAHWHLNSRDMAALRRDVLLFLTVALLVSCD
AAFIDVLYRVAEEQPPNTLIGSLAADQGLPDTGHLYKLEVGSPYLRVDNKTGDIYTTEIP
IGREKMRKCRNRLYGNKCFLEFKVSITDMVKGLGSGPRLIKGRIEVLDNTPQLVVMGNLD
RERKDSYNLNISVVDGGRPARASSALLRVTATDENDNAPRFERSHYEADLPENSPLGHSV
LQVRANDTDTGIEGKIRYSLHKPLKSVKRLLRIDRLTGIIYVKGLVDREEENVLEFFVVA
KHRGSNSKNSTVQVTISVKDQNDNPPAIEIHDFGLVTHHDGVANISEDMPIGTKVVLVLV
SDCDEGENAVVTCVVTGDVPFQLQHDIESANNRMRKYFLQTTTLLDYERVKDYRIEIVAV
DAGDPPRSSYVGVTINVLDENDNAPYVTKPANSSYTYLTPVTPPDTRVEVVEAEDIDSGP
NAELVFTITGGNPFDLFHISPSSGEITLAKEFTGKHNGLHRLVVRVSDKGKPPRHTTALV
HVFVNDTKSNVSVIEALVGHSLYTPLDRDIAEDPNYAFAHYSNILYGSLAGIAGVILVIV
AAVVIGHRLTKDAKSGYQEDSLQKGFYLINESVTDIPRIHLPLNYPPGSPDLGPHYRSNS
PLLSIQLQPVSSEKHQAVQDLPVTNTLVGRGDNNSTGSDQYSDYSYKANPPK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgccaagttcacaccacacgactttctgctcgccgacagatcctggagttgcagcaaat
cggaggaaaatcagagtgaaatcagggcttgcacattggcacttgaacagtcgagacatg
gcggcgctgaggcgggacgtcctgctgttcctgacggtcgccctgctggtctcctgtgat
gccgcattcatcgacgttctgtatcgtgttgccgaggagcagccccccaacacgctgatc
ggcagcctggcggcggaccagggcctgcccgacacgggccacctctacaagctggaggtg
ggctcgccctacctgcgcgtggacaacaagacgggcgacatctacaccacggagatcccc
atcggccgcgagaagatgcgcaaatgccgcaacaggctctacggcaacaagtgcttcctg
gagttcaaggtgtcgatcaccgacatggtgaagggcctcggctcggggccgcggctgatc
aagggccgcatcgaggtactggacaacacgccgcagctggtcgtcatgggcaacctggac
cgcgagcggaaggactcgtacaacctgaatatcagcgtggtggacggcggccggccggcg
agggcgagcagcgccctgctgcgggtcaccgccaccgatgagaacgacaacgcgcccagg
ttcgagagaagccactacgaggccgacctcccagagaacagtccgctgggacactcggtg
ctgcaggtcagagccaatgacacagacaccggcatcgaaggcaagatcagatacagcctc
cataagcccttgaagagtgtaaagaggctgctgcgcattgaccgcctcacaggcatcata
tacgtcaaaggcctggtggaccgcgaggaggagaacgtcctcgaattctttgtggtcgcc
aaacatcgtgggtccaactctaagaactccacggttcaggtgaccatcagtgtcaaggac
cagaatgacaacccgccggcgatcgagatccatgattttggcttggtgacacaccacgac
ggtgtggccaacatctctgaggacatgcccattggcaccaaggtggtgctggtcctggtg
tcggactgtgacgagggggaaaatgcggtggttacgtgcgtagttaccggagatgttcct
tttcagctccaacatgatattgagtcggccaacaatcggatgaggaagtacttcctgcag
acaactaccctgctggattatgagcgtgttaaggattacagaattgaaattgtagcagtg
gatgctggcgaccctcctcgatcctcttatgtaggtgtgaccatcaatgtcctggatgag
aatgataacgccccctatgtcaccaaaccggccaactcctcctacacctacttgacacct
gtcaccccaccagacacccgggtggaggtggtagaggctgaggatattgactctggaccc
aatgcggagctggtcttcaccatcacaggtggcaacccgtttgacctatttcacatctcg
ccaagcagcggggagatcacactggcaaaggaattcaccggtaagcacaatggcctgcat
cgccttgtggtgagggtaagcgacaaaggcaaacctccccgccacaccactgccctggtc
catgtttttgtcaacgacaccaagtccaatgtctctgtcatcgaggcgctggttggacac
agtctctacacccctctggacagggacattgccgaagatcccaactacgctttcgctcat
tacagcaacatcctgtatggcagcctggcgggcatcgctggtgtgattctggtcatcgtt
gccgcggtggtcatcggacatcggctgaccaaggatgccaagagcggctaccaggaggac
agcctgcagaaaggcttctacctcataaacgaaagtgtcaccgacattcccagaatccac
ctgcccctcaactacccaccgggaagccctgatctgggcccccactaccgctccaactcc
cccctactctccatccagctgcagccagtgtcgtccgagaagcaccaggctgttcaggat
cttcctgtcaccaacaccttggtgggaaggggcgacaacaactccacaggctccgaccaa
tattcggattacagctacaaggccaacccgccaaaataa
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