Scophthalmus maximus (turbot): 118319995
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Entry
118319995 CDS
T09850
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
smau04990
]
118319995
Domain-containing proteins not elsewhere classified [BR:
smau04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
118319995
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Syntaxin_2
Motif
Other DBs
NCBI-GeneID:
118319995
NCBI-ProteinID:
XP_047190250
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All DBs
Position
9:complement(21587208..21673474)
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AA seq
1390 aa
AA seq
DB search
MASPVADIGQSHQQHHPDSAADSAFREAQTWIEAVTGRCFGDRDFRGGLENGILLCELLS
SIKPGLVRKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSTRPTAKGSDC
SRKLKNVLITIYWLGRAANGCTSYNGPTLDLKEFEGLLSQMRKEAEEAESPKRSIRDSGY
IDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSRQTPSPDVLVARGSSDGRGSDSESDGA
PHRKMPDIRKDDMSARRTSVTELRTAMPFNQYLPNRSNQSGYVPAPLRRKKTDKEEGTRK
SWSTATSPVGGDRPFSPNEIRSLDTPSPSPTPPLEPQTPIHQERHSVKDEEEEGRRAASS
IPRIEIHSASARRSSDPPPCRLPRPHAEPPSEAVTHLTVTSEQSTPARSCSEELFHHSTT
LAGGGAAAVATGPGKKHAPTATEAGARKGVPGAPPVGDSEQDEKRARRTPTSPKAIAAQT
SPSRFLPVPATAATTLKDTAEAGRRKARALSESNDPQGGGGTPWLDGNLPATFSHTDSVS
DDSQSVSMIDMRGEDESMLQPHSQVRHELMHNQYNKLKEEEDHWQDDLARWKNRRRSVSQ
DLIKKEEERKTMENLLTGEPCTSQRRRSIKTYREIVEDKERREEDLRNAYRRARTPEEAS
FVLQRYAQRFSISEAILERLQLPQLLDRSVSADPSFAGSPFPLSLSASPTTPDPFDEDPD
GPLRFLRQQSAPAPKFTATLEARIEEFPKDSSSHHRPQIRSRSSEPPSTRALSPKPVPLL
TPKPYFELRGRAAEPWANKADGLLRVNGSVGSDDHPTTPESRGRESPPHFEASPSKTYSS
SISSVAAPAPSSSSAASPAHPSPHTSPGGGGGGGGGGGGGGGGSIPVSTKPEEAQGGAKA
ASEDVGEQRVTEHSSPPSRPTSLPAELQKPEESFWKTGGQTAAAPEENNSNAAAQPTLLP
SDAKQQEVEKAEPSGRDISGLVSSTQQSPPVTSQASFTSSQEFSHTRENVPSVAASGSSG
YHPTQEITPEFTNSVSSPLANSNPKLRWEFFAPAEEAEKDCGANVSVPVLPQARRVDRWS
WDPDEERKRQERWQQEQERMLQEKYRREQAKLKEEWEKAQREVAEEERKYHEEERRILEE
TVTPLTPRSSALPSPSRGELSAAAAEPHDTIVRSLADWERKQQLLERQSRGSTESAEGQR
RENDRTSDISTADDSMKTGRSLVSHSSSQPETLGHSLQNGQKPHPLPTPTSSDKSSTPVK
KQQDVAADSNKPSRPAGDRRAGPIDNNTSHSPSQPPAACPPSPDSLPPAPNRSVSGRKLC
SSCGQPLGKGAAMIIETLSLYFHIHCFKCGVCKGQLGDTTTGTDVRIRNGLLNCHQCYIR
SRSAGQPTTL
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtccggtcgcagacatcggacagtctcatcagcagcatcaccccgactcggcc
gcagactccgcgtttcgagaggcgcagacgtggatcgaggctgtgacgggaagatgtttt
ggtgacagagatttccgaggaggtctggagaatggcatactgctgtgcgagttgctgagc
tccattaaacctggcctggtgaggaagattaacagacttccaacacccattgctggcctg
gacaacctcagtgtgtttctccgcggctgtgaggagttgggactgaaaggctcccagctg
tttgaccctggagacctgcaggacacgtcgacacgccccaccgccaagggaagcgactgc
agccggaaactcaagaatgttctaatcaccatctactggctgggtcgtgctgccaacggc
tgtacctcctacaacgggcccacgctggacctgaaagagtttgagggcctgctgtcacag
atgcgaaaggaggcggaggaggcagagagcccgaaacgcagcatccgcgacagcggctac
atcgactgctgggactccgagcgcagcgactccctctccccgccgcgccacggccgcgag
gactcgttcgacagcctggactccttcggctcgcgctcgagacagaccccgtcgccagac
gtcctggttgcccgcggcagcagcgatggccgcggcagcgactccgagtccgacggcgcc
ccccacaggaagatgccggacatccgcaaggacgacatgtcggcgcggcggacgtccgtc
accgagctgcgaacggccatgcccttcaaccagtacctgcccaacaggagcaaccagagc
ggatatgtgccggcgccgctccgcaggaagaaaaccgacaaagaggagggcacacgcaag
agctggagcaccgccacgtcacccgtagggggcgacagacctttcagtccaaatgagatc
cgtagcttagacaccccgagtccgtctcccaccccgccccttgaaccccagacaccgatt
caccaggagcgtcacagtgtaaaggatgaggaggaggaagggaggcgtgctgcatcatcc
atacctcgcattgagatccattcagcgagcgcgaggaggagcagtgaccctccgccctgt
agactcccccggccccacgcagagcccccctcggaggccgtgactcacctgacggtcacc
tctgagcaaagcaccccagctcgctcatgctcggaggaactcttccaccattcgacgact
ctggcgggaggcggcgcggcggcggtcgccacaggccccgggaaaaaacacgcacctacg
gcgacagaggccggagcgaggaagggggtccccggtgcgccgccagtcggcgactcggag
caggacgagaagcgggcccgtcggacgcccacctctcctaaggccatcgccgcgcaaacg
agtccctcccgcttcctccccgtgcctgccaccgcggcaacgactttaaaggatacggcg
gaggcgggccgacggaaggccagggccctgagcgaaagcaacgacccgcaaggaggagga
gggacgccctggttggacggcaatcttccagcaacattcagccacacagatagtgtgtcg
gatgattcgcagagtgtgagtatgatcgacatgcgaggcgaggacgagtccatgttgcag
ccccacagtcaggtgcgccacgagctgatgcacaatcagtacaacaagttgaaggaagag
gaggatcactggcaggacgacctggcgcggtggaaaaaccgcaggaggagcgtttctcag
gatctgatcaagaaggaggaggagaggaagacgatggagaacctgctgaccggagagccc
tgcacctcgcagaggaggagaagcatcaagacgtacagagagatcgtggaggacaaggag
cgtcgtgaggaggatctgcggaacgcctaccgaagagcccggacccccgaggaggcgtcg
ttcgtcctccagcgctacgcccagcgcttctccatcagcgaggcgatcctggagcgcctg
cagctgccccagctcctggatcgcagcgtatccgccgacccctccttcgccggctcgccg
ttccccctgtccctctctgcctccccgacgacgccggaccccttcgacgaggaccccgac
gggcccttgaggttcctgcgccagcagtccgcgcccgcccccaagttcacggccacgctg
gaggcgcgaatcgaggagttccccaaagactcgtcctcccaccatcggccgcagatccgc
tcccgctcgtccgagccgccgtccacgcgagccctgtcgcccaaaccggtgcctttgctg
acgcccaagccttacttcgagctccgaggcagagcggccgagccgtgggccaacaaggcg
gacggtttgcttcgagtcaacggcagcgtaggaagtgacgaccatcccaccacgcctgag
agtcgaggaagggaatctcctcctcacttcgaggcatcaccttccaaaacctacagcagc
agcatcagctctgtagctgcccccgccccttcctcctcctcggcagcatcgcccgcacat
cccagtccacacacctcccccggaggaggaggaggaggaggaggaggaggaggaggagga
ggaggaggaagcatcccagtgtcgacaaagcccgaggaggcacaaggtggcgccaaagca
gcttctgaggacgtcggagaacagagagtaacggagcattcgtcgccaccgagtcggccg
acctcactgccagcggagctgcagaagccagaggaaagcttttggaagacgggaggccag
acagcagctgctccggaggagaacaactcaaacgctgcggctcaaccaacactactacct
tcagatgccaaacaacaggaagtagaaaaggctgaaccgtctggtcgggacatctccggt
ctggtcagcagcacacagcaaagtccgccagtaacttcacaggcgagtttcaccagctcc
caggagttttcacacacaagagagaatgtaccaagcgtagctgcatcgggatcatctgga
tatcacccgacacaggaaatcacaccagagtttacaaacagtgtcagctctccactggca
aacagcaaccctaagttacggtgggagttcttcgctccagcagaggaggcagaaaaggat
tgtggtgcaaacgtgtcagtgccggtgttgccccaggccaggcgggtcgaccgctggtcc
tgggacccggatgaggagcgaaagcgtcaggaaaggtggcagcaagagcaggagcgcatg
ctgcaggagaagtaccggcgcgagcaggcgaagctgaaggaggagtgggagaaggcccag
agggaggtggcggaggaggagcggaagtaccacgaggaggagcgtaggatactggaggag
accgtgacccctctgaccccccgctcctcggccctgccgtccccgagccgcggggagctc
tccgccgccgccgccgagccccacgacaccatcgtgcgctcgctggccgactgggagcgc
aaacagcaacttctggagaggcagtcgagggggagtacggagagcgcggaggggcagcgg
agggagaacgacaggaccagtgacatcagcactgctgacgacagcatgaagacgggcaga
agcttagtgagtcacagcagcagtcagccagagacactcggccacagtctgcagaacggc
cagaagcctcatcctcttcctactccgacgtcatcggacaaatcctcgactccggtgaag
aaacaacaagatgtcgcggcagacagcaacaagcccagtcggcccgcgggagacaggagg
gctggtcccattgataataacacgagccacagcccatcacagccccctgcagcttgtcca
ccttctccagactcactgcctccagcacccaacaggtcggtgagcgggaggaagctttgc
tccagctgcggtcagccgctgggaaaaggtgcagcgatgatcatcgagacgctgagtctc
tacttccacatccactgcttcaagtgtggggtgtgtaagggacagttgggcgacacgacc
acgggcacagacgtgcggatcagaaacggcctcctcaactgccaccagtgctacatccgc
tcccgctcggccggacagccgaccacgttgtga
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