Scophthalmus maximus (turbot): 118320324
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Entry
118320324 CDS
T09850
Symbol
usp9
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
smau01002
]
118320324 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
smau04121
]
118320324 (usp9)
Enzymes [BR:
smau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
118320324 (usp9)
Peptidases and inhibitors [BR:
smau01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
118320324 (usp9)
Ubiquitin system [BR:
smau04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
118320324 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
118320324
NCBI-ProteinID:
XP_035506810
LinkDB
All DBs
Position
14:complement(5275621..5312832)
Genome browser
AA seq
2639 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQGQGEG
PHQLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEAC
QRFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAM
ATNPHCKFHIYNGTRPSETVPAGAQLADDELFARPPDPRSPKGWLVDLINKFGTLNGFQM
LHDRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKK
EAKNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALN
EVNKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKIL
RFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWT
NASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILD
YSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQT
NLAGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVR
PGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKCVTF
LLPNRYSKLMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLV
AKRRAYMMDDLELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDF
IQSCFDRLKASYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTIL
PMSRAFRGKHITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILTRIKANAAHTKIELF
IGGEVVDPADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYS
DGPNPEVESCLPGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVE
NLRAVCLDHAKLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQY
NFLKSGGLPLVLSMLTRNNFLPTADMETRRGAYLNALKIAKLLLTSVGFGHVKAVAEACQ
PNAEGNIPVSPINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQASK
YIPDICVIRAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEV
MTLCFALMPTALDTLSKEKAWQTYIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLL
FFITLLFTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIR
DEVKRTGETGVEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPAS
NVYLQYMKSGDFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKQIVDTLTDMYYLGS
ETLTEWEYLPPVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVD
DDMSGDEKQENESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAAS
RLQYYVPRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGS
FADQKICQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKK
VDTVKRLLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEG
DDVNPENQVIQQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRW
YKFDDGDVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMD
SLDKDSELVKYISELTISSSKPNQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKL
LTCNSVYLNPPPGQDHLLPEAEEIAMISAQLAAKFLFSTGFHTKKVVRGPASDWYDALCI
LLRHSKNVRYWFAHNVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSP
TASPGPSTQGCDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQL
LKLNVPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSTRMQSSINGNPPLP
NPYGDTNLTAPVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSST
VLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRS
KNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQ
YTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDETEAPD
DQDSSPPEDTSLYPHSPGTAQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPTQT
PTPGPGPTPGPGPRAQENWESTEEVAAPAPAPASTSSTTTSTTTTTTSSTTPAPAPPKE
NT seq
7920 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacacgtggctctccggtggggggcaatgacagtcagggccagggccag
ggccaggcacctgatgctcagagccaacccccactgccacagaaccagacatcttctcct
aactcatctaatgagaactctccagtgagcccaccagatgagcagggtcagggggaaggg
ccccatcagctggaagaggaggagcccgccttccctcacactgacctagccaagctggat
gacatgatcaacaggcctcgttgggttgttccagttttgccaaaaggggaattagaagtc
ctcttggaagctgcaattgacctgagtaaaaaaggactggatgtgaaatgtgaggcatgt
cagaggtttttccgggacggtctgaccatctccttcacgaagatcctgacagacgaggca
gtcagcggctggaaatttgagattcataggtgtatcatcaataacacgcaccggttggtg
gagttgtgcgtggccaagctctctcaggactggttccctctactggagcttctggccatg
gccaccaacccccactgcaagttccacatctacaatgggacgcggccctccgagaccgtc
cccgctggagcacagctggctgacgacgagctcttcgcccgaccaccagacccacggtct
cctaagggctggttggtggacttaataaacaaatttggcacgttaaacgggtttcaaatg
ttgcacgatcgcttcatgagcggccaagcactgaacgtccagatcatcgctgcacttatc
aagccttttggccagtgttacgagttcctcacattgcacacggtaaagaagtacttcctt
cctgtcatcgagatggttcctcagtttctagagaatctcacagatgaggagctcaagaaa
gaggccaagaatgaagccaaaaatgacgcactgtccatgataatcaagtctctgaagaat
ctggcttctcgtgttccggggcaggaggagaccgtgaagaatttagagatttttaggtta
aaaatgattcttaggttattgcaaatttcttcttttaatggcaaaatgaatgcactaaat
gaagtgaataaggtgatctccagtgtgtcctactacactcatcggcataaccccgaagag
gaggagtggctgactgcggagcgcatggcggagtggatccagcagaaccacattctctcc
atcgtgctcagggacagtttgcaccagccgcagtacgtcgagaaactggagaagatcctt
cgcttcgttatcaaagagaaagctcttacaatgcaggatctggataacatctgggctgca
caggctggtaagcatgaggctattgtgaagaatgtccatgacctcctggccaagctggca
tgggacttctcgcccgagcagctcgatcacctcttcgactgtttcaaggcaagctggaca
aacgccagcaagaagcagcgtgaaaaactgctggaacttatccggcgcttggcggaggac
gataaggatggcgtgatggcccacaaagtcctcaacctgctgtggaacctggcacacagc
gacgatgtgcctgtagacatcatggaccaggctcttagtgctcacatcaagatattggat
tacagttgctcacaggacagagacacgcagaaaatccagtggatagatcgcttcatagag
gaactacgaactaatgataaatgggtgattcctgccctgaagcaaatcagagaaatctgt
agcctctttggagaagcgccgcaaaacctcagaaagaaaatgccaattaacatacaaacg
aacttagccggtcaaactcagagaagtcctcatgtgttctaccgacacgacctgatcaac
cagctgcagcacaaccacgctctggtgaccttggtggccgagaacctctccgcctacatg
gaaaccatgaggcagttctccaaagaagaacaagcggagtttgaccctcagacggtccgg
ccaggaagccgctacagccatgtccaggaagtacaggaacgcctcaacttcctgaggttc
ctgctcaaggatggccagttgtggctctgtgcccctcaggccaagcagatctggaagtgt
ctggctgagaacgcagtgttcctctgtgaccgcgaggcctgcttcaaatgcgttaccttc
ctgctacccaataggtactcaaagctgatgggcgacgagccagacctggacccggacatc
aacaaggacttcttcgagaacaacgttctgcagttggacccgtctctgctgacggaaaac
ggcatgaagtgctttgagaggttcttcaaggccgtcaactgccgcgaggggaaactggta
gcaaaacgcagggcctacatgatggatgacctggaactaataggcttggactacctctgg
agggtggttattcaaggaagtgatgacatcgccagccgagcaatagatctgctgaaagag
atctacaccaacctcggaccaaaactacaagtcaatcaggttgaaattcacgaggatttc
atccagtcgtgttttgaccgcctgaaggcctcctacgacaccctgtgtgtgttggatggc
gacaaagacagcatcaactgcgctcgtcaggaggccatccgcatggtgcgagtcctcact
gtgctcaaggagtacatcaacgagtgcgacagcgactaccacgaggaaaggaccatactg
cccatgtccagagccttccgtgggaagcacatcacgttgatcgtacgtttccccaaccag
ggccgtcaggtggatgacctggacatctggtcacacaccaacgacacaatcggctcagtt
cgccgtggcatcctcaccaggatcaaagcgaatgctgcacataccaagatagagctcttc
attggtggagaggttgtcgatcccgctgatgacaggaagctaatcggacagctcaatttg
aaggacaagacgctgatcacggccaagttgacccaggtgagcgccaacatgccttcaagc
ccagacagctcctctgactcatccactggctcccctggtaaccatggcaaccactacagc
gacgggcccaaccccgaggtggagagctgtcttcctggtgtgattatgtcgctgcatctg
cgctacatctccttcctgtggcaggtggccgacctgggctgcaacctcaacatgcctctg
cttagagatggagccagagttctcatgaaactcatgcccccagacaacactacagtggag
aatctgagagcggtgtgtctggaccacgctaaactcggtgagaacagcctcagtccgtca
ctggactcgcgcttcttcggcccctcgccctcacaagtgctctacctcatcgaggttgtg
tatgcgttgctgatgccagccagtgccactctgggcgaagatgccagcgacttccaatac
aacttcttgaagagcggcgggctgcccctggtgctgagcatgctcaccaggaacaacttc
ctcccgacggcagatatggagacgcggcgcggggcttacctcaatgccctcaagatcgcc
aagctcctgctgacctccgttggctttggacatgtgaaggctgtggctgaggcctgccaa
cccaatgcggagggaaatattcctgtctcaccgatcaaccaggccacccacgaccaagcc
ctggtcctccagagtgccctgcagaacatccccaaccctgcctcagaatgcatgctgcgc
aacgtagccatccgcctggcgcagcagatttctgatgagaatttcttccaggcatcaaag
tacatcccagacatctgtgtgatccgagcagtacagaaaatagtgtgggcatcaggctgt
ggcacagtgcagctcgtcttcagttccaatgaagaaattagcaagatatacgagaagaca
aatgcagctaaggagccagatggggaagatgagcaggtgtgctgcgaggccctggaagtg
atgacgctttgttttgccctcatgccaacggccctggacacgctcagtaaggagaaggct
tggcagacctacatcatagacctgctgctacactgccacagcaaatcagttcgtcagatg
gcccaggagcagtttttcctgatggcaactcggtgctgtatgggccaccgacccctcctc
ttcttcatcaccctcctcttcactgtgctagggagtacagccaaggagcgagccaaacac
gctggggactacttcactctgctccgacatctgctgaactatgcctacaacagtaacatc
aacctgccaaatgctgaggtgctgctcaacaacgagatcgactggctgaagaggatacgg
gatgaggttaagaggacaggggagacaggtgtggaggagaccatcctggagggccacctc
ggggtcaccaaagaacttctagctttccagacaccagaaaagaaatactacattggctgt
gagaagggaggagccaacctcattaaggagctgattgacgacttcattttcccagcgtct
aatgtttacctgcagtacatgaagagtggggatttccccacagagcaggccatcccagtg
tgcagcacccccgcttccatcaacgctggctttgagctcctggtggctctggctgtcggc
tgtgtccgcaacctcaaacagatagtcgacactctgactgacatgtattacttaggtagt
gaaacgttgaccgagtgggagtatttgcctccggtggggccgcggcccaacaaaggcttt
gtaggtctgaagaacgctggggccacctgttacatgaactctgtcatccagcagctgtac
atgatccctcctatccgcaatggcatcctggccatcgagggcacgggcaccgacgtggac
gacgacatgtcgggggatgagaagcaggagaacgagagtaacgtggatcctcgtgacgag
gtgttcagctaccaccatcagtttgacgataagccctccagcaagtcagaggacaggaaa
gagtacaacatcggggtcctgcgccacctacaggtcatctttggccatctagctgcatcc
agactgcagtactatgtcccgaggggattctggaagcagttcaggttatggggtgagcca
gtgaacttgagggagcagcacgatgctctggagttcttcaactctttggtggatagttta
gatgaagctctgaaagccctgggccaccccgccatgctcagcaaggtgctgggagggtcc
ttcgctgaccagaagatctgtcagggatgcccccacaggtatgagtgcgaggagtcattc
acaacgctcaacgtagacatcagaaaccaccagaacctgttggactccatggagcagtac
gttaaaggagatctgctggagggagccaatgcctaccactgtgagaagtgtaataagaag
gtggacacggtgaagcgcctgctgattaagaagctgccaccagtcctggccatccagctg
aagcgcttcgactacgactgggagagggagtgtgccatcaagttcaacgactactttgag
ttcccccgggagctggacatggagccgtacacggtagcaggtgtggccaagctggagggg
gacgatgtcaatccagagaaccaggtgatccagcagaacgagccgtctgagcccacacct
ccgggcagctccaagtatcgtctggtgggagtgctggtccactcaggccaggccagcggc
ggacactactactcctacatcatccagaggaatgggggtgacggcgagaagaaccgctgg
tacaagtttgacgacggcgatgtgaccgagtgcaagatggacgacgaggaggaaatgaag
aaccagtgcttcggcggggagtacatgggcgaggtgttcgatcacatgatgaagaggatg
tcgtatcgcaggcagaagcgctggtggaacgcctacatcctcttctacgagcgcatggac
tcactggacaaggacagcgagcttgtcaaatacatctcagagttgaccatctcctccagc
aagccgaatcaggtcaagatgcctggtgtcatcgagtgcagcgtccgcaagcagaacgtc
caattcatgcacaaccgaatgcaatacagcctggaatatttccagttcattaagaaactt
ctgacctgtaacagtgtctatttaaaccctcctccaggacaagaccatcttctgccagag
gcagaggagattgctatgataagtgctcagctggctgctaagttcctcttcagcacaggt
ttccacaccaagaaagtagtacggggtcctgccagtgactggtacgacgccctctgcatc
ctgctgagacacagtaagaatgtacgctattggtttgcacacaacgtcctgtttgcatac
cccaaccggttctccgagtacctgctcgagtgcccgagcgccgaggtccgcggagcgttc
gccaagctcatcgtcttcatcgcccacttctcgctgcaagacggcccctgcccctccccc
accgcctcgcctggaccctctactcagggctgtgataacctcagtttaagtgaccacctg
ttaagagctgtactcaacctgctgaggagagaggtttctgaacacggccgtcacctgcag
cagtacttcaacctctttgtcatgtacgccaatctaggcttggcagaaaagacccagctg
ctcaagctaaacgttcctgccacgttcatgttggtcgccctggacgagggtcccggccct
ccaatcaaataccagtacgctgagctggggaagctctacactgtggtttcgcagctggtc
cgctgctgtgacgtgtccacgcgcatgcagtcctccatcaatggtaaccctcctcttcct
aacccatatggggacaccaacctgacggccccggtgatgcccgtgcagcagctggtggca
gagattctgtttgttcggaccagctacgtgaaaaagatcatcgaagactgcagcaactct
gaggagacggtgaagctgcttcgcttcagctgctgggagaacccccagttctcctccact
gtgctcagtgaactgctctggcaggttgcatactcctacacctacgagctgaggccttac
ctggacttgctgctacagatcctgctcatcgaggactcgtggcagacacacaggatccac
aatgtgctgaagggaattccagatgatcgagacgggctcttcgacaccatccagcgctcc
aagaaccactaccagaagcgggcctaccagtgcatcaagtgcatggttgccctgttcagc
aactgctctgtggcttatcagatcctacagagtaacggtgacctgaaacgaaagtggacg
tgggcagtcgagtggttaggggacgagctggagaggaggccctacacgggcaacccccag
tacacctacaacaactggtcccctccggtccagagcaacgagacctccaacggatatttc
ctggagcgttcgcacagtgcacgtatgaccctggccaaggcctgtgaactctgtcccgaa
gagctcaagtgtactcagggaagcccagggaaggagcccgacgaaacggaagcgcccgac
gatcaagactcctccccgcccgaggacacgtccctgtacccgcactctcctggaaccgcc
cagtttcagcagaacaaccacccccatgggcagccgtacaccgggcctgctgctcagcac
atgaacaacccccagcgtcccggtcctgcctcggccccgactcccggcccgacccagacc
cccaccccaggccctggtcccactcccggcccaggcccgcgagcacaagagaactgggag
agcaccgaggaggtcgccgcccccgcccccgcccccgcctccacctcctccaccaccacc
tctaccaccaccaccaccacctcctccaccaccccagcacctgccccgcctaaggagtaa
DBGET
integrated database retrieval system
