KEGG   Scophthalmus maximus (turbot): 118320350
Entry
118320350         CDS       T09850                                 
Symbol
parp4
Name
(RefSeq) protein mono-ADP-ribosyltransferase PARP4 isoform X1
  KO
K10798  protein mono-ADP-ribosyltransferase 3/4 [EC:2.4.2.-]
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03410  Base excision repair
smau04210  Apoptosis
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118320350 (parp4)
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    118320350 (parp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:smau03400]
    118320350 (parp4)
DNA repair and recombination proteins [BR:smau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     118320350 (parp4)
SSDB
Motif
Pfam: VIT PARP4_MVP-ID PARP VWA_3 VIT_2 VWA VWA_2 WGR-like_PARP4 BRCT_2 BRCT VWA_CoxE PARP_reg TniB
Other DBs
NCBI-GeneID: 118320350
NCBI-ProteinID: XP_035506901
LinkDB
Position
14:2955537..2971472
AA seq 1877 aa
MAVFDSCSVLLDLKTLSFKEKKKLQSAVTENGGSVSFVVNKQCSLIVTSDVSKLSTNRLR
SIQKYGTPVVGVDYVYGCLDRGVLLPVDEYKLDTSPPAASSPSRHLSSLRPAPLSRQVAE
PMDPVAGPTPRAQTPQRSRRVLEKYRIYTEIDSDHPPYPDHFQVAKYSIFEKTNSNTWCV
LELQSVRGESGRRYRVVRNWKNDVEVEKETLVFPSTSEEAVEVYHTLRDMSLAAGLQLRG
SLPPQARALGSSVLQQLMLEENLNTGSVSQEVAVFVELLWTEALGQLSVTLRVPVHKLSL
NDVSRAEGLLLQAQKKLKEEKRTEVTSLLEEFYVLLQHRVHLQLPDAKVISQKLDLCQLI
RDVLNVSEMSLRSPAPSCVGKYRALRCSIETVPPGSSEFQVVTTPLQHSKVKIQKVLRVA
RGMELQTFQSELGNVRTLLHSSSPSNFVGILSRGLLMPRAGVEHHGIERTDIGNLGSGIY
FSDAIRTSLKYSRPSTTDGSRLLLVCDVALGSCRDVRKRDPTLTEAPEGHHSVHGVGCTR
HTPSEFEDDEYVVYGPDQVKLKYVVQFSMEGEELREFSPAVDTSAEPGRPPSDQVLSLED
DGVEVIKNPLEDVKVGLLDSSGQRLPLQAVHVKCKLMDLLSQVIIFQKYTNTSSLPIEAK
YVFPLDDSAAVCGFEAFINGKHVVGKVKEKETARKEYRQAVEKGHGAYLMDQDAPDVFTI
SVGNLPPGASVLIKVTFVSELIVRDGSILFSLPGSVAPWQESAALNQTTQVTVEKVCVTD
EAASTREFTLDMSVEMPNEISSLQCITHKVKIKRTDCKAVVSLLPGQVMGAEGFQLSVSL
SEVHLPRMWVERHPDKDSQACMLVFYPDFDVCSDSASDEVVLLLDTSESMKGESLCAAQR
IALQVLKTLHHSLRVNVVLFGTDHTEAFPTAQPLAEARQAAESFIKNVSPVGGSTELWRP
LRALSLLPPSRGTRNLLLLSDGHIQNAEFTLKLLRDDVQHSRLFTCGLSPTANRHMLRAL
AQAGGGSYEFFDMKTKHNWAEKVACQVKRVASPGCRSVSVKWQQFNPTAAAPVQAPKQLH
ALFNDCHTLVYGFVPHCTQATLLGNLSGQELKTMVSTSELQKTKGTFLHKLTARALIRDY
EDGSLDRDEAEHEGKKAELKSFIVELSREFSILSQFTSFVAIEERDSAGQPEEGFTDIPK
LIAEEDVDLLPYISWDFPQKSGDDEEQEEEEVGGCFELEVLDLDHVESYFMEEGMSNDLC
LSWAPVSSDYSPMKASSWSVPSRVPEKERSRPKKKKRRSVRSIEEKHEVMESLSDKIESV
SHTLLPPGPHPPTPTGSFDKLSSIGSCPKLTSSSLGHVRHSFGRMRQPARPPAYPSSSSG
FVAAGLPQSKGSPFYGGMRQPAPPPPPPPPPPAYTSLVDQTFSDSLIHPPHPPHPYIASG
FVVAGLPPSQGSPLFGSICPSAPPPPPPPPPPPPLLPLLAYQSSLVQTGSSASPIPPPPP
SLVGTPLLAADDTQGSSPGSVIRTLRSLSQRTSMYKMSARRKSSSSREMDAAFGATTPPI
VQPAPALDACLDMETGYSDHMVSYRMGRRSKSGLLRSQRSGELECSLIQSASIVPPARMA
GFKGMQVRPQGQPVDEEDTLSTGFSYMAGLIQRHLICDEPGESVLLHRMGSPRHPPVELP
LPQSAIPQDFWQEGEKPPHPLSPPVSFKRKPIDPEELKLKWTKIFQMQNSDGYWELTTQL
GEFMNVDVDLFANVFLKNKGILSLGVRAHADILRLLATLLVLQLMREEEVEEGKLLRTLF
CLDISSEPRPQRWEEVKRAVEWVRWADRQYPCIYSRLEFGLSWESSTRQLLGYEGLPPFS
PLSSLNLWRTAAPLLVH
NT seq 5634 nt   +upstreamnt  +downstreamnt
atggcggtgttcgacagctgctccgtgctcctggacctgaagactctgtccttcaaggag
aagaagaagctgcagtcggcggtgacggagaacggaggcagcgtttccttcgtggtcaac
aaacagtgctctctgatagtgaccagcgatgtgtccaagctgagcaccaacaggctgcgc
agcatccagaagtacgggacgcccgtggtcggggtggattacgtgtatggctgtctggac
agaggagtgctcctgcccgtggacgagtacaaactggacacttcccctcccgctgcttcc
tcaccttctcgtcatctgtcctcactgaggcctgctccactctcacgtcaagttgccgag
cccatggaccccgtggccggtccgactccgagggcacagactccacagaggagcagacgt
gtcctggaaaagtacagaatatacaccgaaatcgattctgatcatccaccgtatccggat
cattttcaagttgcaaaatattcaatctttgaaaagacaaacagcaacacttggtgtgtg
ctggagctgcagagtgtccgaggagagagtggacggcgttaccgcgtggtcaggaattgg
aagaacgatgtagaagtcgagaaggagacgctggtgtttccatccacctcggaggaagct
gtcgaggtttaccacacgctgagagacatgtcgctggccgccggtctgcagctgaggggc
agcctccctcctcaggcccgggccctgggttcctccgtgctgcagcagctgatgctggag
gagaacctgaacacagggagcgtatcgcaggaggtggccgtcttcgtggagctgctgtgg
accgaggccctgggccaactctccgtcaccctcagagttcccgtccacaagctcagcctc
aatgacgtgagcagggcggagggtttgttgcttcaggctcagaagaagctgaaggaggag
aaacgcaccgaggtgacatcactcctggaggagttttatgtcctgctgcagcaccgtgtc
caccttcagcttcccgacgccaaggtcatctctcagaaactggacctctgtcagttgatc
cgagatgtcctgaacgtgagtgagatgtctctgcggagccccgccccctcctgtgtgggg
aagtaccgtgcactcaggtgcagcatcgagacggttcccccgggcagctccgagttccag
gtcgtgaccactccgctgcagcacagcaaagtgaagatccaaaaggttctgcgagtcgcc
agggggatggagcttcagacgtttcagagcgagctcgggaacgtcaggacacttcttcat
tcctccagccccagcaactttgtaggaatcctgtctcgtggtctgctgatgccccgtgct
ggagtggagcatcatgggatagagaggacagacatcggtaacctgggcagtggaatctac
ttcagcgatgccatcagaaccagtttgaaatactccaggcccagtacgaccgacggctcg
cggctgctgctggtctgcgacgtggcgctgggaagttgtcgggacgtccgcaagagggac
cccacgctgaccgaagcccccgagggacaccacagcgtgcacggagtcggctgcacccgg
cacactccctccgagtttgaggatgacgagtacgtggtgtacggtcccgatcaagtgaag
cttaagtacgtggtacagttcagcatggagggggaagagctgagagagttcagtcctgcc
gtcgacacctctgccgagccggggcggcctccatccgaccaggtgctgagtttggaggac
gacggagttgaagtcattaaaaaccctctggaggacgtgaaggtgggactgttggacagc
tctggtcagcggctccctctgcaggccgtccacgtgaagtgcaaactgatggatctgctc
tctcaggtcatcattttccaaaagtacaccaacacgagctccttgcccattgaggccaag
tacgtcttcccactggacgactcggcagcagtgtgtggattcgaagctttcatcaacggg
aaacacgtggtgggaaaggtgaaggagaaggagacggctcgcaaggagtacaggcaggct
gttgagaagggccacggagcgtatctcatggaccaggacgcccccgacgtgttcaccatc
agtgtgggcaacctgccgcccggagccagtgtgctcatcaaagtgacctttgtgtccgag
ctgatcgtccgggacgggagtatcctcttctcgctgcccgggagcgtggccccgtggcag
gagagtgcggcgctcaaccagaccacgcaggtcactgtggagaaggtgtgtgtgactgat
gaggcagcaagtacaagagagttcaccctggacatgtcggtggagatgccaaatgaaatc
agcagcctgcagtgcatcactcacaaagtcaagatcaagagaacagactgtaaggcagta
gtgagtttgctgccaggacaggtgatgggtgcggaaggttttcagctttctgtcagtctg
tctgaagtccacctgcccaggatgtgggtggagagacaccccgacaaggacagccaggcc
tgcatgttggttttctacccggacttcgacgtctgctccgactcggcgtccgacgaggtc
gtcctgttgctggacacgtccgagtccatgaagggagagtctctctgcgcggcccagcgg
atcgccctccaggtcctcaagaccctccaccacagcctccgagtcaacgtggtcttattc
ggcacagatcacacggaagcgttcccgacggcgcagccgctcgctgaagcccgtcaggcg
gcagagagcttcatcaagaacgtctctccggtgggtggcagcacggagctctggcggccc
ctgcgcgccctcagcctgctgcctccgtcgcgcggcaccaggaacctgttgctgctgtcg
gacggccacatccagaacgcagagttcaccctgaagctgctccgggacgacgttcagcac
agccgcctcttcacctgcggcctcagcccgacagccaatcggcacatgctgagagccctg
gcccaggcagggggtggatcctacgaattctttgacatgaaaaccaaacacaactgggca
gagaaggtggcgtgtcaggtgaagcgcgtcgcgtccccgggctgcaggtcggtgtcggtg
aagtggcagcagttcaacccaacggcggcggctcccgtgcaagcacccaaacagcttcac
gctctgttcaacgactgccacacgcttgtttacgggtttgtgccccactgcacacaggct
acattgctcgggaacctgagcggtcaggagctcaagaccatggtgtcaacaagtgagctg
cagaagacgaagggcacatttcttcacaagctcacagcaagagccctcatcagggattac
gaagacggaagcctggacagggacgaggcggaacatgaggggaagaaagcggagttgaag
tccttcatcgtcgagttaagcagagagttctccattctgtctcagttcaccagctttgtg
gccattgaggaaagggattcagccggacaaccagaggagggtttcacagatattcccaaa
ttgatcgcggaggaggatgtggacttgctcccctacatcagctgggatttccctcagaag
agtggagatgatgaggaacaggaggaagaggaagtaggagggtgttttgaattggaagtg
ttggaccttgaccacgttgaaagttacttcatggaggaaggaatgtcaaatgatctttgt
ctgtcatgggccccagtctcttcagattattcaccaatgaaagcctctagctggtctgtt
ccatcgcgtgtccctgagaaggagagaagtcgtcccaaaaagaaaaaaagacggtctgtc
aggtcaatagaagagaaacatgaagtgatggaaagtctttcagacaagattgagagtgtt
tcccacactctgcttccccctggtcctcatcctccgactcccactggttcctttgacaaa
ctgagctccatcggaagttgtcctaaattaacaagttcttctcttggacatgtgaggcac
tctttcggaagaatgcgtcaaccagctcgtcctcctgcgtacccatcttcatcatcaggg
tttgtcgcagctggtcttccgcaaagcaaaggttctcctttttacggagggatgcgtcaa
ccagctcctcctcctcctcctcctcctcctcctcctgcgtacacatctttagttgaccaa
actttttcagactctctgatccatccacctcatcctccccatccttacattgcatcaggg
tttgtcgtagctggtcttccgccaagccaaggttctcctcttttcggaagtatatgtcca
tcagctcctcctcctcctcctcctcctcctcctcctcctcctcttcttcctcttcttgcg
taccaatcttcacttgtccaaacgggttcttcagcctctccgatccctccacctccacct
tctttggttggcactccgctcctcgcagctgatgatactcaaggttcttctcctggatct
gtgattcgcactctcagaagtctctctcagcgaacttccatgtacaaaatgtcagcacgt
cgcaaatcatcctcttcacgtgaaatggacgcggccttcggcgccaccacacctcccatt
gttcaacctgcgcctgcactggatgcatgtctggacatggaaacgggttactctgaccac
atggtctcttaccgtatgggccgccgttcaaagtctggactgttacgttctcaacgttct
ggagaattggaatgttctctaatacagagtgcatctatagtgccaccagctcgtatggca
ggatttaaaggaatgcaagtccgtcctcaaggtcaacccgtggatgaagaggacactctt
tcaacaggcttttcttacatggcaggattgatccagagacatcttatatgtgacgaaccg
ggtgagagtgttttactgcacaggatgggttcaccacgtcaccctccagttgaactgccg
ctaccacaatcagcaattcctcaagacttttggcaagaaggcgagaagccccctcatcct
ctgtctccaccagtttccttcaagaggaaaccaatagatcctgaagaactgaagctcaaa
tggacaaagatcttccagatgcagaattcggatggctactgggagctgacgacgcaactg
ggcgaattcatgaacgtcgacgtcgacctcttcgccaacgtgttcctgaaaaacaagggc
atcctctctctgggtgtgagggcccatgcagacatcctgaggctgctggcgactcttctg
gttctgcagctgatgagggaggaggaagtggaggaaggcaaactgctgcgcaccctcttc
tgtctggacatctcctctgagcccaggccacagaggtgggaggaggtgaagagggcagtg
gagtgggtccgctgggccgacaggcagtacccgtgcatctacagccggctggagttcggt
ctgagctgggagtcctccacccgtcagctgctgggctacgagggcctgccccccttctcg
cccctcagcagtctgaacctgtggaggacggccgcccctctgctggtccactga

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