Scophthalmus maximus (turbot): 118320375
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Entry
118320375 CDS
T09850
Symbol
hspd1
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118320375 (hspd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118320375 (hspd1)
03110 Chaperones and folding catalysts [BR:
smau03110
]
118320375 (hspd1)
03029 Mitochondrial biogenesis [BR:
smau03029
]
118320375 (hspd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smau04147
]
118320375 (hspd1)
Enzymes [BR:
smau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
118320375 (hspd1)
Messenger RNA biogenesis [BR:
smau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
118320375 (hspd1)
Chaperones and folding catalysts [BR:
smau03110
]
Heat shock proteins
HSP60 / Chaperonin
118320375 (hspd1)
Mitochondrial biogenesis [BR:
smau03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
118320375 (hspd1)
Exosome [BR:
smau04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118320375 (hspd1)
Exosomal proteins of other body fluids (saliva and urine)
118320375 (hspd1)
Exosomal proteins of breast cancer cells
118320375 (hspd1)
Exosomal proteins of colorectal cancer cells
118320375 (hspd1)
Exosomal proteins of bladder cancer cells
118320375 (hspd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
118320375
NCBI-ProteinID:
XP_035506963
LinkDB
All DBs
Position
14:1327777..1333517
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AA seq
627 aa
AA seq
DB search
MQSAGRAGNYPGCDRPCAVVRCRLAPHGQSSLSYITPCCRTCSSSTLSTSTDMFRLPTVM
RQVRPVCRALAPHLTRAYAKDVKFGSDARALMLQGVDLLADAVAVTMGPKGRNVIIEQSW
GSPKVTKDGVTVAKSIDLKDKFQNIGAKLVQDVANNTNEEAGDGTTSATVLARAIAKEGF
DSISKGANPVEIRRGVMMAVETVIAELKKLSKPVTTPEEIAQVATISANGDLEIGNIISN
AMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKCEFQDAYLLLSE
KKISTVQSIVPALEIANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLLVVAVKAPGFGDN
RKNQLRDMAVATGGTVFGDDTLGAALEDIQAHDFGKVGEVQITKDDTLLLKGGGSAAEVE
KRAAEIIEQLENTTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDRVTDALNAT
RAAVEEGIVQGGGCALLRCIPSLDSIIPANNDQKMGVDIIRRALRIPAMTIAKNAGVEGS
LVVEKILQGSVDIGYDAMLGEYVNMVEKGIIDPTKVVRTALLDAAGVASLLATAEAVVVE
LPKEEKEMAGGMGGMGGMGGMGGGMGF
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgcagagtgcggggcgtgccggtaactaccccggatgtgatagaccatgtgcagtggtc
cggtgtcgtctcgccccacacggtcagtcctctcttagttacatcacgccgtgttgcaga
acgtgtagcagctccacactctccacctccacagacatgtttcgtctcccaacagttatg
aggcaggtgaggcccgtgtgccgggcgctcgcccctcacctcacacgggcctacgccaaa
gacgtgaagttcggatccgacgctcgcgccctcatgctgcagggagtcgacctgctggct
gacgccgtggccgtcaccatgggtcccaagggtcgcaacgtcatcatcgagcagagctgg
ggcagccccaaggtcaccaaggacggcgtgacggtggctaagagcatcgacctgaaggac
aagttccagaacattggcgccaagctggtgcaggacgtggccaacaataccaacgaggaa
gccggcgacggcaccacctccgccacggtgctggcccgcgccatcgccaaggagggcttc
gacagcatcagcaagggcgccaacccggtggagatccgccgcggcgtcatgatggccgtg
gagaccgtcatcgccgagctgaagaagctctccaagccggtcacgacccccgaggagatc
gcacaggttgctacgatctcggctaacggagacttggagatcgggaacatcatctccaac
gccatgaagaaagtcggccgcaagggagtcatcacagtcaaggacgggaagacgctgcac
gacgagctggagatcatcgagggcatgaagttcgaccgtggttacatctccccgtacttc
atcaacaccgccaaaggtcagaagtgcgagttccaggacgcctacctgctgctgagtgag
aagaagatctccaccgtccagagcatcgtgccggccctggagatcgccaaccagcaccgc
aaacctctggtcatcgtggctgaggacgtggacggagaagctctgagcaccttggtcctc
aacaggctgaaggttgggcttctggtggtcgctgttaaggccccgggcttcggagacaac
aggaagaaccagctgagggatatggccgtggccaccgggggcactgtgtttggagatgat
actctgggcgccgccctcgaagacatccaggctcacgacttcggtaaggtcggcgaggtg
cagatcaccaaagacgacaccttactgctgaagggcggcggtagcgcggccgaggtggag
aagcgtgcggcggagatcatcgagcagctggagaacaccaccagcgactacgagaaggag
aagctcaacgagcggctcgccaagctatccgacggcgtggccgtgctcaagatcggagga
acgagtgacgtggaggtgaacgagaagaaggaccgcgtgacagacgctctgaacgccacc
cgggcggctgtggaggagggaatcgtccaaggcggaggctgcgctctgctgcgatgcatc
ccgtcgctggacagcatcatacctgccaacaatgaccagaagatgggtgtggacatcatc
aggcgggcgctgcgtatccccgccatgaccattgccaagaacgcaggggtggagggttcg
ctagtggtggagaagatcctgcaggggtcggtcgacatcggctacgacgccatgctggga
gagtacgtcaacatggtggagaagggcatcatcgaccccaccaaggtggtgaggacggcg
ctgctggacgccgcgggcgtggcctcactgctcgccaccgccgaggccgttgtcgtggag
ctccccaaggaggagaaggagatggcgggaggcatgggcgggatgggaggcatgggcggg
atgggaggaggcatgggtttctaa
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