Scophthalmus maximus (turbot): 118320399
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Entry
118320399 CDS
T09850
Symbol
si:ch211-269e2.1
Name
(RefSeq) cohesin subunit SA-2 isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
118320399 (si:ch211-269e2.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118320399 (si:ch211-269e2.1)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
118320399 (si:ch211-269e2.1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
tRNA_bind_3
Cnd1
NFACT_N
Motif
Other DBs
NCBI-GeneID:
118320399
NCBI-ProteinID:
XP_035507021
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All DBs
Position
14:5332528..5345799
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AA seq
1185 aa
AA seq
DB search
MITEPTATDASRPSEQTKAKSSGAVNQSEDESGNENRQKNVRRRRRAHDTSENVTRKSAR
AASSGVGRAGGGGRGNTRRHVEAVTLFEVVTMGRSAMQVVIDDWIEAYATDRDSSLLDLI
SFFIQCSGCKGVVTAEMCQSREDGDLMSKMVEELDEAASLRYKKFLAFPWILTVTWPMDT
DGVVEYPLVQSGPYGRWFHSEFCDFVSVLVAQYQQHGVILDGYLMNTLISLLTELSNSYI
RAFRHTCTLAAVKLLSSLAAVALSLSVGTENSQKLYKVQKTKMTRQKGTAQLERIQKKIT
ELQEKRTEIESMMDVIFKGVFLKRYRDALPEIRSLCVEELGLWMKLDSSAFLNDPYLKYM
GWTMYDKIPDVRLKCVLGLQCLYGNPLLLAKLDLFTSRFKDRMISMTLDKDNEVAVQSMK
LLLLISKTSDDVLSADDYQQLLRFVYSSQRPLAAAAGELLYSRLLNSDTQDDLNEEEEAH
ELPTSARLKALLRFHQESELHTHVVYLVDSLWDCGGALLKDWATLTSILLQDPSSHGPGL
TLAEQAVLVEILVASVRQASEGPVVVGRSGAKKVMSAREKKVQIDDSTKFTQHLLPVLPK
LLSKFVQFSSYPDVVASLMKIPQFFLPECPEAENTQAVSSLVAEMGNVLDVHSDPAVLEA
AARTYLSLCGDEATWSSTARDARDALVQTWVERLTVLLGDSLKVEENCFAADGEKTRDIL
AALKKLRAFHNCHDLSGWSLFELLSPLLSVESSLGGAPPEVLLEVLQCLSYFMLWSLNTS
GETLTSREKAVAQRLQLRLFCERSHHCLSHCDHIVRHQAFLGVCDVLTAHSFQLHVWDPT
SFGPLAYTPSPRLQRALSSFVCLHVFVGPDCDSQSRVSENSGVEKLEDLHRRRNLLAAFC
KLVVHGVLEMSVAAEVFMYYVKYYNDFGDIIKETMYRARRTDKIESTRTLVLCLQQLFVR
LKREQESGGGRAQPGVQTFTSIKELARRFALTFGDLVKFRECVVVIHRSGVEFVFQEFSQ
TPETPTPLYLSYLTILSEFSSKLLKPDKKTVFCYLQKLTAEHVTDLREERWQPLIYYRAS
LLAAAEGEDAASFVSSGRKPQPPNRSPFSKQKLDGSKLPCPFSPADSKGSKGHRSKFSPS
RQERTTTDVDPFSVPLDPPAGKLNTEGSVLSTNHEVDDETVEIEL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgataacggagcccacagcgacagatgcatccaggccatcagagcagacgaaggcaaag
tcctctggtgccgtcaatcaatcagaggatgagtccgggaatgagaatcgacaaaagaac
gtgagaagaaggagaagagctcacgacacctcagagaatgtcacccgcaagagtgccaga
gccgccagcagcggtgtcggcagagcaggaggcggcggccgcggtaatacacggaggcat
gtggaggccgtcaccctgtttgaggtggtcactatgggcaggagcgccatgcaggtggtg
atagacgattggatcgaggcctatgccacggacagagactcctccctcctggatctcatc
agcttcttcatccagtgctctgggtgcaaaggtgtggtcacagcagagatgtgtcagagc
agagaggacggcgatttgatgagtaagatggtggaggagctggacgaggccgcgagtctg
cgctataaaaagtttctggcctttccgtggatcctcacagtcacgtggcccatggataca
gacggcgtggtggagtatcccctcgtacagtcgggcccgtacggccgctggtttcactcg
gagttctgtgactttgtgtcggtgctggtggctcagtatcagcagcacggcgtcatcctc
gacggctacctgatgaacacactgatttcgctgctcaccgagctgtccaactcgtacata
cgggccttccgacacacgtgcacgctcgcagcggtgaagctgctgagctctctggcggcc
gtggctctgagcctgagtgtcgggactgagaacagtcagaaactgtacaaggtgcagaag
acgaagatgacgagacagaaaggcacagcgcagctggagagaatacagaagaagatcaca
gagctgcaggagaagaggacggagatagagagcatgatggacgtcatcttcaaaggagtt
tttctcaagagatatcgcgacgcgcttccagaaatccgctccctctgcgtggaggagttg
ggtctgtggatgaagctcgacagctctgcgttcctcaatgacccctacctcaaatacatg
ggctggacgatgtacgacaaaataccggacgtgcgtctcaagtgtgtgttgggtttgcag
tgtttgtacggaaatcctctgctcctcgcgaaactcgacctgttcaccagccgcttcaag
gaccggatgatctccatgaccctggataaggacaacgaagtggctgtgcagagcatgaag
ctactgctcctcatctccaagacatctgacgacgtgctcagcgcagacgactaccagcag
ctcctccggtttgtttactcttcacagcgtcctctcgcagccgctgcaggggagctgctc
tactccaggcttctcaactctgatactcaggatgatctgaacgaggaggaggaggcacat
gaactaccaacttctgcccgactgaaggctctgctgcggttccaccaggagtctgagctg
cacacacacgtggtgtacctggtggacagtctgtgggactgtggcggagctctgctgaag
gactgggccacactcacgtctatactgctgcaggacccctcctcgcacggcccgggtctt
acactggcagaacaagcagtgcttgtagagatcctggtggcatcagtgcgtcaggcctca
gagggaccagtcgtggtcggtcggagcggagcgaagaaggtaatgagcgccagagaaaag
aaagttcagatcgacgacagtacaaagttcacccaacatctcctccctgttcttccaaag
ttactgtccaagtttgtgcagttttcgagttacccggacgtcgttgcctccctgatgaag
attcctcagttcttcctccccgagtgtcctgaggctgaaaacacacaggcggtgtccagc
ctggtggcggagatgggaaacgtgctggacgtccactcggacccggccgttctggaggcg
gcggctcgcacgtatctgagtctgtgcggggacgaggcgacgtggagctccacggcccgg
gacgccagagacgctctggtccagacctgggtggagcggctcaccgtcctgctgggggac
tcgctcaaggtggaggaaaactgtttcgctgctgacggggagaaaaccagagacatttta
gccgctctgaagaaactgagagctttccacaactgtcacgacctctctggctggagtctg
ttcgagctgctctctcctctcctgtcggtggagagcagtctgggaggagcgccgcccgag
gtgctgctggaggttctgcagtgtctgagttacttcatgctctggtctctcaacacgagc
ggtgaaactctgacctccagagagaaggccgtggcccagaggctccagctgcgtctgttc
tgcgagaggagtcaccactgtctctcccactgcgaccacatcgtgcggcatcaggcgttt
ctgggtgtgtgcgacgtcctgacggctcactccttccagcttcacgtgtgggaccccacc
tccttcggcccgctggcctacacgcccagtcccagactgcagagggcgctgtcgtccttt
gtgtgcctgcacgtcttcgttggcccggactgtgacagtcagagcagagtcagtgaaaac
tccggcgtggagaagctggaggaccttcacagacggaggaacctgctggcggccttctgc
aagctggtcgtgcacggcgtgctggagatgagcgtggcagccgaggtcttcatgtactac
gtgaagtattataacgactttggagacatcatcaaggagacgatgtaccgggcgaggcgg
acggataagatcgagagcactcgcactctggtgctctgtctgcagcagctgtttgtgcgt
ctcaagagggagcaggagagcggtggcggcagggcccagccgggagtccagaccttcacc
agcatcaaggagctggcccggcggttcgccctcaccttcggggacctcgtcaagttccgt
gagtgcgtcgtcgtgatccacaggtccggcgtagagtttgtgttccaagagttcagccag
acgccggaaacgcccacgccgctgtacctctcctacctgaccatcctcagcgagttctcc
agcaaactgctcaaaccagacaagaagactgtgttctgctacctgcagaagctcactgcg
gagcacgtcaccgacctccgagaggagcgctggcagccgctcatctactaccgcgcctcc
ctactggccgcggccgaaggggaggacgccgcgtccttcgtgagctccggcaggaagccc
cagccgcccaaccgctcgcccttttccaaacaaaaactagacggaagcaagttgccctgt
ccgttcagccccgcggactccaaaggtagtaaaggtcacagatccaaattcagtccaagc
cgtcaggagaggacgacgacagatgtggatccgttctccgtcccactggatcctcctgca
gggaaactgaacacagagggatcagtgctcagcaccaaccatgaggtggatgacgaaact
gtggagattgaactgtaa
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