Scophthalmus maximus (turbot): 118320404
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Entry
118320404 CDS
T09850
Symbol
clasp1a
Name
(RefSeq) CLIP-associating protein 1a isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smau03036
]
118320404 (clasp1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
smau04812
]
118320404 (clasp1a)
Chromosome and associated proteins [BR:
smau03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
118320404 (clasp1a)
Cytoskeleton proteins [BR:
smau04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
118320404 (clasp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EZ
Adaptin_N
Vac14_Fab1_bd
Cnd1
MMS19_C
Sec7-like_HUS
ParcG
MMS19_N
TAN
Paxt-1_C
Dopey_N
TPR_20
HEAT_DAAF5
mTOR_dom
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
118320404
NCBI-ProteinID:
XP_035507040
LinkDB
All DBs
Position
14:complement(21483401..21568942)
Genome browser
AA seq
1646 aa
AA seq
DB search
MEPSMENCLAQVLQKDMGRRLQLGQEIIDYILDKEKSHDLEQDQTALDKMVDGIASSWVN
CSNFKVALLGLDLLSALVTRLQERFRAQVGTVLPSLIDRLGDSKDQVRDQDQTVLLKIME
QAASPQYVWDRMLGGFKHKNNRTREGVCLCLIATLNTYGAQGLTLSKIVPHICNLLGDPT
SQVRDAAMSSLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSKFDEVQRSGNMISSSGSDK
NFEDEDSMDGGRSSSSSSSKAPPSGRRTVMSSVRRPSSATTAKPTAKEVAAGAVDEEDFI
KAFEDVPSIQIYSNRELEDQLTKVREVLSDEKHDWEHRVVALKKVRSIMLAGATEYEGFP
QQLRLLEAPLKLSAKDLRSQVVREACITLGHLSSILGNKFDHGAESVMPTLLNLVPNSAK
IMATSGVVTIRLILRHTHYPRLIPIITSNCTSKSVAVRRRCYEFLDLMLQEWHTNTLERH
VAVLTETIKKGIHDADSEARSIARKCYWGFHGHYSREAEHLFQALESAYQKALQSHLKSS
DSIVSLPQSDRSSSSSQESLNRPLSVKSVIGGSITRSKLVSTRVPTTPGSLQRSRSDIDV
NAASSAKSRLSTVPASSSPFSSAAALPPGSYASLDGTPGKSDGRVRTRRQSSGSVGGAGT
TVVDSRGRSRAKVVSQSQRSRSANPISAGSRSSSPGKLLGHSSYGRIPRAPAPASSTPAD
KRSRIPRSQGCSRETSPSRMGLASLCGKALLPAALPYRTLARSRIPRPSMSQGCSRDTSR
ESSRDTSPARGFAPLASRRHSRSTSALSTADPHGQSDRYGLIHQARISASVNAMRVLNTG
TEVEAAVADALLLGDSRNKRKPLRRRYESPGMYSDDDANSDASSACSERSYSSRNGGIPH
YLRQTEDVAEVLNHCASSNWSERKEGLLGLQNLLKSQRILSRVELKRLCEIFTRMFADPH
SKRVFSMFLETLVDFITVHREDLQDWLFVLLTQLLKKMGADLLGSVQAKVQKALDVTRES
FPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSETRLAVSRIIT
WTTEPKSSDVRKTLHSWLSEELTGRSSTAALLSTESNQEERCKQAAQVVLISLFELNTPE
FTMLLGALPKTFQDGATKLLHNHLKNTSNTSSSVGSPSNTTGRTPSRHTPNRTSPLTSPT
NCSHGGLSPSRLWGWGVDGLSKHPPAPPPPPPPHSTPAAPSLRVLRRAYSPSMMEYDTEN
MNSEEIYSSLRGVTEAIQSFSYRSQEDLNEPIRREGKRDDATGREGVASSPGSDARLSVD
MVEGGRTALDNKTSLLNTPSPRSFSGPRGREFAPYGYGETICTYDKSAMKEAVFDDDVEQ
FRDCRRQESGENKMTLPKVFAPAVGQDHSDLVADLLKELSNHNERSEERKGALVELLKIT
REDSQSVWDEHFKTILLLLLETLGDKDHTIRAMALRVLKEILRNQPARFKNYAELTIMKT
LEAHKDSHKEVVRAAEEAASTLASSSHPEQCIKVLCPIVQTADYPINLAAIKMQTKVIER
ITKESLVTLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPHLAQLTGSKMK
LLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggagcccagcatggagaactgcctggcgcaggtcctgcagaaggacatgggccggcgg
ctgcagttgggacaggagatcatcgattacatcttggacaaggagaagtcccacgacctg
gagcaggatcagacggcgctggacaagatggtcgacggcatcgccagctcctgggtcaac
tgcagcaactttaaggtggctctgctcggcctggacctcttatctgccttagtgacaagg
ctgcaggagcgattcagggcccaggtgggaacagttctgcccagcctcatcgatcgtctg
ggagattccaaagaccaagtgcgggaccaagaccaaacggtgctgctgaagatcatggag
caggccgcctccccgcagtacgtgtgggacaggatgctgggaggcttcaaacacaagaac
aacaggaccagagaaggagtgtgcctttgcctcatcgccacactgaacacgtatggagct
caaggcctgaccctcagtaaaattgttcctcacatatgtaacctcttgggggaccccaca
agtcaggtgcgtgatgcagcgatgagcagcttggtggagatctacaggcatgtgggtgag
agggtgaggatggacctcagcaaaaaaggcctgccacagtcacggttgaatgtaatcttc
agcaaattcgacgaagtccaaagatccgggaacatgatctcatcctctggctcagataag
aactttgaggatgaggactccatggacggaggccggtcctcctcctcatcatcctcaaaa
gcgccccccagtggcaggaggactgtaatgagctccgtcagaagacccagctcggccacc
acagctaagcccacagctaaagaagtagcagccggtgcagttgatgaagaggatttcatc
aaagccttcgaagacgtgccctctatccagatctactcgaacagagagctagaggaccag
ctgaccaaggtccgagaggtgctgtccgatgaaaaacatgactgggagcaccgagtggtg
gcgctgaagaaggtccgttcgatcatgttggccggggccaccgagtatgagggtttccct
cagcagctgcgtctcctcgaggcgcccctcaagctgtcagctaaagacctgcgctctcag
gtggtccgcgaggcctgcatcactctgggacatttgtcatcaattctgggcaacaagttt
gaccatggagccgagagcgtcatgcccacactgctcaaccttgtacccaacagtgccaaa
atcatggccacgtccggggtggtcaccatccgcctcatcctcaggcacacacactaccct
cgactcatccccatcataaccagtaactgcacctccaaatcagtcgcagtgagacggcgt
tgttacgaattcttagacctcatgttacaagagtggcacacgaacacactggagagacat
gtggcagttctgactgagaccatcaagaaaggcattcatgatgccgactctgaggccaga
tccatagcaagaaagtgctactggggtttccatggtcactacagtcgggaggcagagcat
ctgttccaggcactagagtctgcctatcagaaggccctccagtcccacctgaagagctct
gacagcatcgtgtctctgccccagtctgaccgatcgtcgtcgtcttcccaagagagtctc
aaccgacctttgtctgtgaagagtgtcattggagggagcataacaaggagtaagctggtg
agcaccagggtacctactacgccgggctccctccagcgctcacgtagcgacatcgacgta
aacgcagcctcaagtgcgaagtcgcgcctctccaccgtccctgcttcctcctcgccattc
agctcggcggctgcccttcccccggggtcctacgcctcactagatggcactcccggtaaa
agcgatggtcgtgtacgcaccaggaggcaaagctccggcagcgtgggtggagccggtact
acggtggtggacagcagggggcgtagccgagccaaagtagtctctcagtcccagcgatcc
agatcagccaatcccatcagtgccggcagtcgctccagctccccgggcaagctactcggc
cacagcagttatggtaggattcctcgagccccggcgccggcctccagcacgccagctgac
aagcgcagcaggatcccccgcagccagggctgcagccgagagacgagtcccagccgaatg
ggtctggccagcctgtgtggtaaagctcttcttcctgctgctcttccctaccgcacgcta
gcccggagccgcattccccgccccagcatgagtcaaggttgcagtcgcgacaccagtcgc
gagagcagccgcgacaccagccctgctcggggcttcgctccgctggcctcccgacgtcac
tcccgttcaaccagtgctctttccacagccgacccccacggccagtcagaccgttatggt
ttgattcatcaggccagaatctcggcgtcagtcaatgccatgagggtccttaacactggc
accgaggtggaggcagcagtcgctgatgctctgctgttaggagactccaggaataagagg
aagcccctgaggcggaggtacgaatcgccgggcatgtactctgacgacgatgccaacagc
gatgcgtctagcgcctgctccgagcgttcgtacagctcacggaacggaggcataccgcat
tacctgcgccagacagaggacgtcgccgaggtcctcaaccactgcgccagctcaaactgg
tcagagaggaaggagggcctgctgggcctgcagaacctcctcaagagccaaaggatactg
agccgagttgagctgaagagactgtgtgagatcttcacaaggatgtttgcagatccacac
agcaagagagtgttcagcatgttcctggagactctggtggacttcatcacagtacacaga
gaggacctgcaagactggctctttgtcctgctcactcagctgttgaagaaaatgggggcg
gacttgcttggttctgttcaggccaaagtccagaaggccctggatgtcacaagggagtct
ttcccgttcgaccaacagttcaacattctgatgagattcatcgtcgatcagactcagaca
ccaaacctcaaggtaaaggtagccattttgaagtacatcgagtccctggcacgacagatg
gacccgacggactttgtcaactccagcgagacacgcctagcagtgtctcgcatcatcacc
tggaccactgaacccaaaagctctgatgtcaggaagacccttcatagctggttgagtgag
gagctaactggcaggtccagtactgcagccttactctccacagagagcaaccaggaagag
aggtgtaagcaggccgcccaggtggtgctgatctccttgtttgagctcaacaccccagag
ttcaccatgctgctgggagcgctgcctaagaccttccaggacggggccaccaaactgctc
cacaaccacctgaagaacaccagcaataccagcagcagtgtggggtctccgagcaacacc
actggacgtacgccgtcacgccacacccccaacagaaccagccctctcacgtctccgaca
aactgctcccacggaggactgtctccaagtcggttatggggttggggtgtcgacggactg
tcaaagcacccccccgccccccctcctcctcctccgcctcactccacccctgctgccccc
tccctaagggtcctgcgcagagcatattcacccagtatgatggagtatgacaccgagaac
atgaattcggaggagatctacagctcgctccgcggcgtcaccgaggccatacagagcttc
agctaccggagccaggaggacctgaatgaaccaatcagacgggagggaaagagggacgac
gctaccgggagagaaggagtggcgtcgtcccccggctccgacgctcgcttgagcgtggac
atggtggaaggaggtcgcactgccttggacaataagacctctctgctcaacacgccctcg
ccacgctccttctccgggcctcgtggtcgcgagtttgccccgtacggctacggagaaacc
atctgcacctatgacaagagtgccatgaaggaggccgtgtttgacgatgacgtggagcag
ttccgcgactgccgacgtcaggaaagtggtgaaaacaagatgacgctccccaaggtcttt
gctcctgcagtcggtcaggaccactcggacctcgtggccgaccttctgaaggagctatcc
aatcacaacgagcgctctgaggagcgtaagggtgccctggtggagctgctgaagatcacg
cgcgaggacagccagtccgtgtgggacgaacacttcaaaaccatcctcctcctcctgctg
gagacgctgggggataaagatcacaccatccgagccatggccctgcgtgtgctcaaagaa
atcctgaggaaccagccggcccgcttcaaaaactatgccgagctaaccatcatgaagact
ctggaggctcacaaggactcgcacaaggaggtggtgcgtgcagctgaggaggcagcttcc
acccttgccagttccagccacccggagcagtgcatcaaggtcctgtgtcccattgtgcag
acagccgactaccccatcaacctggctgccatcaagatgcaaaccaaagtcattgaacgc
atcaccaaggagtcgttggtgacgctgctgcccgacatcatccccggactcctgcagggc
tatgacaacacagagagcagcgtacgcaaggccagcgtgttctgtctggtggctatctac
tctgtgattggtgaggaacttaaaccccacctggctcaactcacgggaagcaagatgaag
ctactgaacctgtacatcaagcgcgcccagacgaccaacagcaacagcagcagctcctca
gacgtctcctctcacagttaa
DBGET
integrated database retrieval system
