KEGG   Scophthalmus maximus (turbot): 118320419
Entry
118320419         CDS       T09850                                 
Symbol
ccnt2a
Name
(RefSeq) cyclin-T2a isoform X1
  KO
K15188  cyclin T
Organism
smau  Scophthalmus maximus (turbot)
Pathway
smau03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:smau00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118320419 (ccnt2a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:smau03021]
    118320419 (ccnt2a)
Transcription machinery [BR:smau03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     118320419 (ccnt2a)
    Brd4/P-TEFb complex
     118320419 (ccnt2a)
    7SK RNP complex
     118320419 (ccnt2a)
SSDB
Motif
Pfam: CycT2-like_C Cyclin_N
Other DBs
NCBI-GeneID: 118320419
NCBI-ProteinID: XP_035507102
LinkDB
Position
14:17001896..17011120
AA seq 723 aa
MAACRGSSSKWFFTREQLENTPSRQCGVEPDRELSYRQQAANLVQDMGQRLNVSQLTINT
AIVYMHRFYMHHSFTKFHRNITSPTTLFLAAKVEEQPRKLEHVIKVAHACLNPQESPLDT
KSNAYLQQAQELVILESIVLQTLGFEITIDHPHTDVVKCSQLVRASKDLAQTSYFMATNS
LHLTTFCLQYKPTVISCVCIHLACKWSNWEIPVSTDGKHWWEYVDNSVTLELLDELTHEF
LQILEKTPSRLKRIRNWRATQAAKKPKSESNQLMDSFAGPSMLLDQGDATLPGVPSSNPT
FSRAAAAFTMSMPGQSGGAALSLDTMASIYNPASHSEWPQGKQSQAGFLATCIKPEPLSS
PLHEQTLSLQTSTSLLLQHPPIYKTEKTEDFSPVKHEQKGAGLSGVGKHQPPPQSAYPPP
VQPQPPQPSPAPKLSLDKYREKLAAEFAVSGQKRRQEQHGGAVDCEVRGEMSASSLSTYA
QSSMSHDHRKHSQPHQTSHGGAGSTTASPMKMKVPSSTSGQDRRHHRDKGLLKLRLALPG
SGSSSQQVKSGQPGKDELKMKIKVSSSEYHSSSDEGMAANNKGKHSSPLVSKEKHRGAEH
NLHRHHKHSHPHSHSGNGRGGPEGHCGSGDLWGTPGLVGMEGMTLAPPGSAPLSSSTSRK
RVYPEVGHNHHPPSSSSTSCSKVSKISKGGTGAAGTSSFSSPFFPPCASPVLQCVSSGLQ
LFG
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggcggcatgcaggggatcctcgtcgaagtggtttttcacccgggagcagctcgagaac
acgccgtcccgccaatgtggagttgagccagatcgggagctctcctaccgacagcaagcg
gcgaacctggtccaagacatgggccagagactcaacgtctctcaactgacaataaacact
gccatcgtttacatgcatagattttatatgcaccactctttcaccaaattccatagaaat
ataacatctccgaccaccttgttcttggccgcaaaagtggaagagcagccccggaaactt
gaacatgtgatcaaagttgcacatgcttgcctaaacccccaagaatcacctctagacaca
aaaagtaacgcatacctccagcaagctcaagagctggtgatacttgaatccatagtgctg
cagaccctgggatttgaaattactattgatcacccacacactgatgtggtgaaatgttcc
cagctagtgcgagcaagcaaggatctggcacagacttcctatttcatggctaccaacagt
ctccacctcactaccttctgcctccagtacaagcccacagtgatctcctgtgtgtgcatc
cacctggcgtgcaagtggtccaactgggagatcccagtttccactgacgggaaacactgg
tgggagtacgtggacaactctgtcactctcgagctgcttgatgagttgacccacgagttt
ctgcagattctggagaagacacccagtcggctaaagaggatacgcaactggagggcaaca
caagctgccaaaaagcccaagagtgaaagcaaccagttgatggactcgttcgctgggcct
tccatgctccttgaccaaggtgatgccacacttcctggagtaccatcttccaacccaact
ttctcaagagcggccgctgccttcaccatgtccatgcctggccagtctggaggtgcagcc
ctgtctctggacaccatggctagcatatataatcctgctagccacagtgagtggccccag
ggcaaacagagccaagcagggttccttgctacctgtataaaaccggagcccctcagcagc
cccctccacgagcagacactgtccctgcagacctccacttccttgttgcttcagcatcca
cccatatacaagactgagaaaacggaagactttagccctgtcaaacatgaacaaaaagga
gctggtttgagtggagtgggcaagcatcagccaccacctcagtctgcataccccccacca
gttcagcctcagccaccgcaaccttctccagctccgaagctgtctctggacaaatacaga
gagaaactcgctgcagagtttgctgtctcggggcagaaacggcggcaggagcagcatggt
ggggcagtggattgtgaagttaggggagaaatgtctgcttcatccttatctacctatgca
cagtcatctatgagccatgaccatagaaaacattcacagccccaccaaacatcccatggt
ggggctggcagtactactgcctccccgatgaaaatgaaagtcccttcctcaacttctggg
caagacagacgacaccacagggacaaaggcttgcttaaactgcgcctggctttgcctggg
tctggcagcagctcccagcaggttaaaagtggacaacccggcaaagatgaacttaagatg
aagataaaagtttcatcatcagagtaccacagctcatcagacgaaggcatggcagccaac
aacaagggtaaacattccagcccgctggtgagtaaggagaagcatcgcggagctgagcac
aacctccatcgccatcacaagcacagccaccctcactcgcacagcggtaacgggcgagga
ggcccagagggccactgtggtagcggagacctatgggggaccccaggactggtcggcatg
gaaggtatgacgcttgctcctcccggatccgcccctttgtcttcatccacgtcgcgcaag
agggtgtacccagaagttggccacaaccaccaccctccctcctcatcctccacttcctgc
tccaaagtgagcaaaatctccaagggtggtactggtgctgcaggtacttcatctttttct
tcccccttttttcccccttgcgcctctcctgtactgcagtgtgtctcatctggcttgcag
ctctttggctaa

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