Scophthalmus maximus (turbot): 118320451
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Entry
118320451 CDS
T09850
Symbol
cnga1b
Name
(RefSeq) cyclic nucleotide-gated channel rod photoreceptor subunit alpha
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
118320451 (cnga1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
smau04040
]
118320451 (cnga1b)
Ion channels [BR:
smau04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
118320451 (cnga1b)
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Ortholog
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GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
TPR_TTI1_C
GmrSD_N
DUF3043
Presenilin
EMC3_TMCO1
CDC45
Tim54
NPR3
PFF1_TM
MDM10
Sec62
RR_TM4-6
DUF2828
DUF6474
DUF5427
Motif
Other DBs
NCBI-GeneID:
118320451
NCBI-ProteinID:
XP_035507169
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Position
12:9725256..9730432
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AA seq
659 aa
AA seq
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MAKVAPSAPPTSRLTTPTIVFQDVEEEPGGLREGGRASQRTGAGGLFNVNNSNNNEEEEE
KKKKKKEKKERKEKKLKERQEKKERKEKKKKEKEEEKEKEKEKEREKEKEKKAKEEAPKE
ITVIDPASNTYYYWLLVITIPVMYNWTLTIARACFEELQTDYVVYWFIIDFLADLTYFAD
MVFRTRTGYLEQGLLVKDEKKLRERYLNSFQFKLDLVSMIPTDVLYVVFGLTFPEIRLNK
LFRFNRMLEFFQRTETRTNYPNALRISNLVMYIVIIIHWNACLYYSFSKAIGFGSDRFVY
PNPADPEFGRLVRKYAYSMYWSTLTLTTIGETPPPVENSEYFFVVTDFLVGVLIFATIVG
NVGSMITNMNAARANFQARIDAIKQYMSFRKVTKDLEKRVIKWFDFLWTNKKAVDEREVL
KFLPDKLRAEIAINVHLDTLKKVRIFADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGR
EMYIIKEGKLAVVADDGVTQFVVLSDGSYFGEISILAIKGSKAGNRRTANIRSIGYSDLF
CLSKDDLMEALKEYPDAKALLEEKGKQILMKDGLLDLELAAQGPDPKEMEEKVERMTSTL
DVMQTRYARLLAEHEATHSKLKYRVTRLERKLPPPRADQPGDAPPPPTPEAQTAAGEEK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagtcgctccatcagccccgcccacctccaggttaactacgcccaccatcgtt
ttccaagacgtggaggaggagccaggcggcctcagggaggggggcagagcttctcaaaga
accggagcaggaggtttgttcaacgtcaacaacagcaacaacaacgaggaggaggaggag
aagaagaaaaagaagaaagaaaagaaagagagaaaagagaagaagttgaaagagaggcag
gagaagaaggagaggaaagagaagaagaagaaggagaaggaggaggagaaggaaaaagag
aaggaaaaagaaagagagaaggaaaaggagaagaaggccaaagaggaggctcccaaagag
atcacagtgatcgatccagcgtccaacacctactactactggctgttagtcatcaccatc
cccgtcatgtacaactggaccttgaccatcgccagggcgtgtttcgaggagctgcagacg
gactatgtggtctactggttcatcattgacttcctcgctgacctcacatatttcgccgat
atggtcttcagaaccaggactggttacctggagcagggtcttctggtgaaggacgagaaa
aagctgcgcgagcgctacctgaacagcttccagttcaaacttgacctggtgtccatgatt
cccacggacgtgttgtacgtcgtcttcggcctcacgttccctgagatccgcctcaataaa
ctcttcaggttcaacaggatgttggagttcttccagaggacggagaccaggactaactac
cccaacgctctccgtatctccaacctcgtcatgtatatcgtcatcatcatccactggaac
gcctgcctgtactactccttctccaaggccatcggtttcgggtccgacaggttcgtgtat
cccaacccggccgatccagagttcggtcgcctggtgaggaagtacgcctacagcatgtac
tggtccacgctgacgctcaccaccatcggagaaacgccgcccccggtggagaactctgag
tacttcttcgttgtcaccgacttcctggtgggtgtgctgatttttgccaccatcgtcggt
aacgtcggttcaatgatcaccaacatgaacgctgccagagccaatttccaggctcgtatt
gacgcaataaaacagtacatgagcttccgaaaggtaacgaaggacctggagaagcgagtg
atcaagtggttcgacttcctgtggaccaataagaaggcggtggatgaaagggaggtgctg
aagttcctgcccgacaaactgagagccgagattgccatcaacgtccacctggacaccttg
aagaaggttcgcatctttgcggactgcgaggccggtctgttggtggagctggtgctgaag
ctgcagcctcaggtctacagtcccggggattacatctgtaagaagggcgacatcggcagg
gagatgtacatcatcaaggaggggaaactggccgttgtcgccgacgacggtgtcacgcag
tttgtcgttctcagtgacggaagctactttggcgaaatcagcatcctggctattaaaggc
agtaaggcaggaaacaggaggacagcaaacatccggagcatcggctactccgacctcttc
tgtctttccaaagacgacctgatggaggcgctgaaggagtatcccgatgccaaggccctg
ttggaggagaagggaaagcagattctgatgaaggacggactattggacctggagttggca
gcgcagggccccgaccccaaggagatggaggagaaggtggagaggatgacgagcacgctg
gacgtgatgcagacgcgttacgcccgactcttggccgagcacgaagccactcacagcaaa
ctcaaatacagagtcacacggctggagaggaagctgccgccgccgcgggccgaccagcca
ggtgacgccccgccccctccgacacctgaggctcagacagctgcaggagaagagaagtag
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