Scophthalmus maximus (turbot): 118320533
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Entry
118320533 CDS
T09850
Symbol
pcdh8
Name
(RefSeq) protocadherin-8
KO
K16499
protocadherin delta 2
Organism
smau
Scophthalmus maximus (turbot)
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
smau04515
]
118320533 (pcdh8)
Cell adhesion molecules [BR:
smau04515
]
Cadherins
Protocadherins
118320533 (pcdh8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
118320533
NCBI-ProteinID:
XP_035507318
LinkDB
All DBs
Position
14:9254434..9258256
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AA seq
972 aa
AA seq
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MGSCTILGVGPCVALVFLFHSVRCTTTKYFTYEEDAPGTEIGNLSRDLKIDPADDAHTSF
RFMQESNSSVVHMRQVDGLLSVADTIDRERLCAGSPRCLVAFDIVALSREKFQLVHVEIE
VRDINDHPPRFPRNETRLEIAENAPLASRFPLQVALDQDVGDNYIQRYNISASSHFAVEV
RVAEDGAKCAELVLVRELDREVEDSYTVRVTASDGGQPARSGSMTVHVKVLDVNDNSPTF
DRSSLKVELNEDAPLGHRVATVHAFDPDDGVNGEVTYALADDSSPEAARLFHVDPHSGDV
TLKAPVDFERRRSYELHVRASDLGAGAVPSSCRLVVDVVDVNDNAPEIRIKPMTSGSDGV
AYITEAAAADSFVALISTSDRDSGSNGYVRVSLLGHEHFSLQQAYGDTFMIITSTTLDRE
RVPEYNLTVVAEDLGSPPFKTVSHYTIRVTDENDNPPLFSKALYEVSVLENNIPGSYVTT
VVARDADVGKNAKVSYKLLDSEVSAGAPVSTYVSVDSLSGSLFTLRSFDYETLQHIELVI
QAEDRGSPSLSSTSTIRIRVVDQNDNYPYFTFPVLLNDSAEVPLPFNAPAGYLALRVSAE
DGDEGVNGELSYQIVQGDPKLFAMNKDSGEIALKQWLTSEIGDVLELQIAVIDNGRSPLS
SSATVRFVVSDTEPADDQVVVVLRSSGEEGSILDGSLIVIIMLSGGCALLLIAIVVVVVT
CKLSRGGRGRGAKREVCHSLFASGPLPMLGSAEPNIYTGQRGFFHERTSSSLDDSCLYEE
RSGDSETKMFLPSKHFQPTSVWQGDKYCLQVSGIGNTDQLSVKDSGKGDSDFNDSDSDIS
GDGGKKNFSTFQPKLKSSSSTANSLSGDCQATYCAAPPQRFRTPRDNAYTIGFSSMPVFN
NPLGYPYSWKDSGYGTNRPKSRSGVQNFSRAGTLPPYFPQQQHDTGVEGAEIHKQRPNFV
TVATALEVATIF
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atgggatcgtgcacgatcctaggagtcggaccgtgcgtggcgcttgttttcctcttccac
tctgtgcgctgtacgacgaccaagtacttcacctacgaagaggacgcacccggcacggag
ataggcaacctgtcccgagatctgaagatcgacccggccgacgacgcgcacacgtcgttc
cgcttcatgcaggagagcaactcctccgtggtccacatgcgccaggtggacggactcctg
agcgtcgcggacaccatcgaccgggagcggctgtgcgccgggtccccgcgctgcctcgtc
gccttcgacatcgtggccttgtcgcgggagaagttccagctcgtgcacgtggagatcgag
gtgagagacatcaacgaccacccgccgcgcttcccgcgcaacgagacgcgcctggagatc
gcggagaacgcgccgctggcctccaggttcccgctgcaggtcgccctcgaccaggacgtg
ggtgacaactacatccagcgctacaacatctccgcctccagccacttcgccgtggaggtg
cgcgtcgcggaggacggggccaagtgcgccgaactggtgctggtgagggaactcgaccgg
gaggtggaggactcgtacaccgtgcgggtcaccgcgtccgacggggggcagccggcgcgc
tccggctccatgaccgtgcacgtcaaggtgctggacgtcaacgacaacagcccgacgttc
gaccgcagctccctgaaggtggagctgaacgaggacgccccgctgggccaccgagtcgcc
acggtgcacgcgttcgacccggacgacggcgtcaacggcgaggtgacgtacgcgctggcc
gacgactcgtcgccggaggccgcgcgcctcttccacgtcgacccgcactccggcgacgtg
accctgaaggcgccggtcgacttcgagaggagacgctcgtacgagctgcacgtccgcgcc
tcggacctgggcgccggcgccgtgccgtccagctgcaggctcgtggtcgacgtggtggac
gtgaacgacaacgcgcccgagatccgcatcaagccgatgacctccggcagcgacggggtc
gcctacatcacggaggccgcggccgcggacagcttcgtggccctgatcagcacctcggac
agagactccggctccaacgggtacgtgcgcgtcagcctgctcgggcacgagcacttcagc
ctgcagcaggcgtacggggacacgttcatgataatcaccagcaccacgctagacagagag
cgggtgccagagtacaacttgactgtggtcgccgaggacctgggcagcccccctttcaaa
accgtcagccactacaccatccgtgtaacggacgagaacgacaacccccctctcttcagc
aaggccctttacgaggtttcagtcctggaaaacaacattccgggttcgtacgtgaccacc
gttgttgcccgagatgccgatgtgggaaagaacgccaaggtctcctataaacttttagat
tcagaggtgtcggccggggccccggtgtccacttatgtttctgtggactcgctctcgggg
tctttgttcacattaaggtcttttgattatgagactctgcagcatatcgagctggtgatc
caagcagaagacagaggttctccctctctgtccagcacatccacaatcaggatccgagtg
gtggatcagaatgacaactacccatacttcaccttccctgtcctgctgaatgactcggcc
gaagtccccctgcccttcaatgcgcccgccggctacctcgccctccgtgtctccgcagag
gacggggacgagggtgtgaacggcgagctctcctaccaaattgtgcaaggtgaccccaag
ctttttgccatgaacaaggactctggagagattgctttaaaacaatggctgacatctgaa
atcggggacgtgctggaacttcaaatcgccgtgattgacaacggcaggtccccgctctct
agcagtgccaccgtcaggttcgtcgtgtcagacacggagcccgccgacgaccaggtcgtc
gtcgtgctgcggtcaagtggcgaggaaggctccatcctcgacggctcactaattgtcatc
atcatgctcagcgggggttgtgcattgttgctgattgcaatagtggtagttgtcgtcacg
tgcaaactcagccgcgggggcagaggccgaggcgccaagagagaagtgtgtcacagcctg
ttcgccagcgggcccctgcccatgctcggctccgcagaaccaaacatatacacgggtcaa
cgaggcttcttccacgagaggacctcctcgtctctggatgactcctgcctgtacgaggag
aggagcggcgactcggagacaaagatgttcctgccctccaagcatttccaaccaacatcc
gtgtggcaaggtgacaaatactgcttgcaagtgagtggcatcggcaacactgaccagctg
agcgtgaaggacagtggcaaaggggacagtgacttcaacgacagtgactctgatatcagc
ggcgatggaggcaagaagaatttcagtaccttccaaccgaagctaaaaagttcgtccagc
actgctaacagcttatccggggattgccaagccacctactgtgcagcgccgccgcagagg
ttcaggacccccagagacaacgcgtacacgataggcttctcctcaatgccggtgttcaac
aatcctctcggctatccctactcctggaaggactctggttacggcacaaatcggccaaaa
tcaaggagcggcgtgcagaacttctccagggccgggaccctccctccttactttcctcag
caacagcatgacaccggcgttgaaggtgcggaaatccacaagcagagaccaaattttgta
actgtggctacggcattagaggttgctactatcttttaa
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