Scophthalmus maximus (turbot): 118320564
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Entry
118320564 CDS
T09850
Symbol
ranbp2
Name
(RefSeq) RANBP2-like and GRIP domain-containing protein 5/6 isoform X1
KO
K12172
E3 SUMO-protein ligase RanBP2 [EC:2.3.2.-]
Organism
smau
Scophthalmus maximus (turbot)
Pathway
smau03013
Nucleocytoplasmic transport
smau03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
smau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118320564 (ranbp2)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
118320564 (ranbp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smau03019
]
118320564 (ranbp2)
03110 Chaperones and folding catalysts [BR:
smau03110
]
118320564 (ranbp2)
04121 Ubiquitin system [BR:
smau04121
]
118320564 (ranbp2)
Messenger RNA biogenesis [BR:
smau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118320564 (ranbp2)
Chaperones and folding catalysts [BR:
smau03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
118320564 (ranbp2)
Ubiquitin system [BR:
smau04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
118320564 (ranbp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ran_BP1
IR1-M
Zn_ribbon_RanBP
Pro_isomerase
WH1
TPR_16
TPR_14
TPR_2
TPR_1
TPR_7
TPR_CcmH_CycH
TPR_8
ARM_TT21_C
ANC1_spectrin
Motif
Other DBs
NCBI-GeneID:
118320564
NCBI-ProteinID:
XP_035507375
LinkDB
All DBs
Position
14:14575656..14598588
Genome browser
AA seq
3042 aa
AA seq
DB search
MRRSKAEVDRYVSSVQSSSPSLKEKPVKGFLFAKLYFEAKEYELAKRHVSGYLKVQQRDP
KAHKFLGQLYEREGDVSKAVGCYKRSVDLNPAQRDLVLKVAELLVSQEESDSRAEFWVEK
AAKLLPGNPAVFNLKERLLSRQGQQGWNRLFDLLQAELAARPGDAHVNVKLVQLFCQDGR
LEEAIKHCLAAEKRGVLSHSLDWYTVVVRTLQEYLAQPSISSNEKMCRRLQRELLLAHCS
LLRITLSESILQPSVDALRGFDQAMQTLSSVAGRHTDDLCEVFVEMRGHLYLHAATLLLK
LAQDRQQTWRVVIDLAALCYLLAYQVPRPKPKVSKRDQSAPQLLELLANDRQSQAGHMLL
NLSTDASTLIREVVEAFGNRSGQDSLFELLFGPQATTGSSFIANDDIRSINTTVPELSQL
AKWDTGSILLHAGDLQHLSWLGLQWTLLAQRPALRDWLAQLFPRLTLETSKLDTNAPESI
CLLDLEVFLHGVVFCSHCQLQETAKISNGMNQQQQLYEPRCLPLPLLRLLTTDRQRELWD
AIYSLIHKQAAPSMSAKLRMVVQHGLSTLRAGEKHGLQPALAIHWAQTLSQTGDGVNSYY
DQKEYIGRSVHYWKVVLPLLERIKNRRSIPEPLEPLFLHFPSKDVQISSVKGYEEEFKIV
CAALLDIEGRTEEAIATLETINNMSSIWHLAQIYQRLSEEASNGVEETQDRCITFLRKFR
IYLCKIYNANADDIDKLPVSMEEVVDLLNDVNQQLGESGDAMDEEEEKEEGRRGPAHSSP
AHPTEASATISHIKFSTPSPNKSMVSPSKRLISPKTPPHWVEDQKSLLQMLCQQVEALKN
EVHDLRHNASGNAGSPHHKLYGDSYGAEGLQESFTPVQSYHGAPLTVATTGPSVYYNQSP
AYNSQYLLRTAANVTPTKGPMYGVNRMPPQQHMYAYQPPTHTPPLQTAQACIYPPQEQVF
GTPLRFESPATSLLSPYSEEYYGQSVTQQTTNPPLPEPGYFTKPSVAPVQPPKIEGKPMD
LGKLSFSQHAPAEVPKVPSFGAGAIAQSTPSAAFKFNSNFKSNDGDFTFSGSQAKHSESL
LGLLTSDIPTKTNAIPEEPPAQEQHSNQSGIFTFGTKGATGFSFVDPAQNAATGGLFGKV
DQPFKFGDVAKPVFGLPSYGAEAEKAAESDNDSTHVEEDEDGPHFEPIVPLPDKVDVKTG
EEEEEEMFCNRAKLYRFDTETKEWKERGIGNVKILKHSTKGKVRLLMRREQVLKICANHY
ITADMLLKPNAGSDKSWVWNAIDYADEEPKPEQLAIRFKTVDEALLFKDKFEEAQKVVVK
SPEKHSQPEKKEESIKGSESLAAQFALKDGEWDCTVCCVRNKPLDIRCVACQSANPNSSS
KPDIQAPGETKASPFTFKFGTDSTNSSSSGSTFSGFGAFGASIPSSFTFGTGASKSADTV
TSAFGSSFGAQFGKKPGQWDCDICEVRNKASADSCVSCKAHKASAKTTVTAQTEPAAEAP
AAQPSACAAKSGFGGQFSKKPGQWDCDVCEVRNEASVDKCVACQSPNPAAKSTKGISVAS
NLPAGSGFGAGFAKNDEQWDCNACLVRNDAPATKCVACHTPLETPSLEDMFAKKDGEWDC
DTCLVRNKASVNKCLACQTPNPNAKSTTSSAPSASTFSFNFGTKGSSSQPTETGFTMPFG
TGSTFQFGHNKDKSSAPSFKFETPQSGSSTSASTSASTSASGFSFSMPIPAGGFKFGIQD
TEKDPPTTENQTPPSGSASSFLKSIADKHNEKQDTSTPSVDQTEVDENPLVSGKNPAFSF
ADLAQSSGADFQFGQKDPDFKGFSGAGKQLFTSFQATPTKTDASNDLEDDDMYKTEENDD
IQFEPVVQMPDKVDLVTGEEDEQVLYSQRVKLFRFDTDTSQWKERGVGTLKFLKHGSNGR
LRVLMRREQVLKVCANHWITTTMNLKPLSGSDKAWIWMANDFSDGDAKLEQLAAKFKSPE
LAEEFKEKFEECQRLLLDIPLQTPHKLVDTGRTAHLIQKAEEMKSGLKDLKFFLTDEKTK
IKDDDNQGGITTSGDVSSLVIKAHSETTGPTLEWDNYDLREEALDDTVDSSVYASPIASS
PLRENLFRFGESTSGFNFSFQPGISPSKSPAKPNQSRVSVGTDDEQDVSQDEDRDGQYFE
PVVPLPDLVEISTGEENELVAFSHRAKLYRYDKELGQWKERGIGDLKLLQNYGTKRVRLI
MRRDQVLKICANHWITAAMKLEPMKGAEKAWVWSAMDFAEEGAGNIEQLAVRFKLQDTAN
TFKQVFEEAKVAQEKEELMTPATPGVASPQDSGPTELPKTETAVCGKAAIAVLEETTKVR
TELFPDVQPCAPESPTPASFSKTVVSPPKFVFGTDSLQKIFGSPKSETEESASGLKAKDV
GRPAKATLASPAFKIPGKGPPKAEGGDAGSYEDSEVEVVYIREPTAEQAALASKLLLPLT
FFCYQNEPGYCSDDQTDDEDYESAVKALNGKLYRDLPVKKAAACSDEPDCQVVWEKKPTP
REEEKAKSLLLPPTFFCGLSTTDSDTDHDKPEDFETEVRKAQQDLDAELNKVGKASSSRA
PEELMPGLSSCSTDAAGSVFTPQEQTSDQPAETPSQAPISSSCPIDLSTKKSPEPESNTE
TAAFTAATTTVTSQDSGFGFNTLGGFSFADLAHNTEGFAFGSQDTNFSWANAGASVFGSA
VSSAPKNTGDEGSDEEEASNNEDIHFEPIVSLPEVETKSGEEDEEILFKERTKLYRWDRD
LGQWKERGIGDIKILFHPAKRFYRILMRREQVLRVCANHTISETMELKPMNSSANALVWT
ATDYSDGDGEVEQLAAKFKTPEIAESFKKTFCDCQSRISSDDSCVTSPQMSRVQEHSRDS
NPRVFLNVSADGQTLGTVTIELFSHIVPKTAENFRALCTGEKGFGLRDSIFHRVIPDFMC
QGGDITNADGTGGKSVYGSKFEDENFDIRHTGPGILSMANRGRDTNNSQFFITLKKAEHL
DFKHVAFGWVRDGMDVVQQMGELGTKGGLPSKKLVIADCGQL
NT seq
9129 nt
NT seq
+upstream
nt +downstream
nt
atgcggcggagtaaggctgaagtggaccgctacgtctcctccgtacagagttcttctccc
tcactcaaagagaagccagtcaaagggtttttatttgctaagttgtactttgaagcaaag
gagtatgaacttgccaaaagacatgtatcagggtatctcaaagtccagcagagggatccc
aaagcacacaaattccttggacagctctacgaaagagaaggagacgtcagcaaggccgtg
gggtgttacaagcggtcagtggacttgaaccccgcccagagggacctggtgttgaaggtg
gctgagttgctggttagtcaggaggaaagcgacagcagagcagagttctgggtggagaaa
gctgcaaagcttctgccagggaaccctgccgtcttcaacctaaaggagcgtctattgagt
cgtcagggtcagcagggatggaaccgcctgttcgacctcctccaggccgagctggcggcg
aggccgggtgatgcgcatgtgaacgtgaagctggtccagctgttctgtcaggatggtcga
ctggaggaggccatcaagcattgcctggctgctgagaaaaggggcgtgcttagccacagt
ctggactggtacacagtggtggtgcgcacactgcaggaatatttggctcagcccagcata
tctagcaatgaaaagatgtgtcggcgactccagagggagctgctattggcccactgcagc
ctgctgagaatcacactgtctgagagcatcctgcagcccagtgtcgatgcactcagaggt
tttgaccaagcaatgcagactctgagcagcgtcgcaggccgccacacagacgacctctgt
gaggtgtttgtggagatgagaggtcacctgtacctccatgctgccacactgctgttgaag
ctggctcaggatcgccagcagacttggagggttgtcatcgacctggctgcactgtgctac
ctgctagcataccaggttcccagaccaaagcctaaagtgagcaaaagagaccagtcggcc
ccacagctactggagctgctggccaacgaccgacagagtcaggctggacacatgttgctc
aatctgagcaccgatgcatccaccttaatcagagaggtggtggaggcatttgggaaccgt
agtggtcaggactcgctgttcgaactcctgtttggacctcaggccaccactggatcttca
tttattgcaaatgatgacattcgttccatcaacacaacagttccagaactgtctcaacta
gccaaatgggacactggctccatcctactacatgctggtgacttacaacatctgagctgg
ttggggctgcagtggacactactggcacaaagaccggccctgcgggattggctagcacag
ctatttcctaggctaaccctggaaacctccaaactggacacaaatgcacctgagtccatc
tgcctactggacctggaggtgtttttacatggcgtggtgttctgtagccactgtcagctc
caggagacggcgaagatcagcaatggaatgaaccaacagcagcagctctacgagcctcga
tgccttccgcttcctctccttcgcctcttgaccactgacaggcagagggagttgtgggac
gccatctacagcctcattcacaaacaagcagccccaagcatgtcagccaagctacggatg
gttgtgcagcatggactgagcactctgagggccggagagaaacatgggcttcaaccagca
ctggccatccactgggctcagactctaagccagacgggtgatggagtgaactcctactac
gaccagaaggagtacatcggccgcagcgtccactactggaaagtcgtcctcccactgttg
gaaaggatcaaaaaccgacgcagtatacccgaacccctcgaacccctcttcttacacttt
ccctctaaagatgtccagatttcttctgtgaaaggttatgaagaggagttcaagatcgta
tgtgcagctctccttgacattgaaggcaggacagaagaggccatcgctaccttggagacc
atcaataacatgtcatccatctggcatttggctcagatctaccagcggctgtcagaggag
gccagcaatggggttgaggagacccaagacaggtgcatcactttcctgagaaagttcagg
atctacctttgtaagatctacaatgccaatgctgatgacattgataagctgcctgtgtcc
atggaggaagttgtagatctcctgaatgatgtgaaccagcagcttggggagagtggggat
gccatggatgaagaggaggagaaagaggagggccgaagaggaccggcccactctagccct
gctcaccccacagaagccagtgccacaatatcccacattaagttttccactccctctccg
aacaaaagcatggtctctccctccaaaagactgatttctcccaagacaccacctcattgg
gtggaggaccagaaaagtctccttcagatgctgtgtcagcaagttgaagcactcaagaat
gaagttcatgatctgagacacaacgcctcagggaatgcaggctcccctcatcacaagctg
tatggggacagctacggggcagagggcctacaggagtcttttaccccagtccagtcgtac
catggtgcccccctaacagttgccaccacaggcccctctgtgtactacaaccagtctcca
gcttataactcccagtatctcctgcgcacagcagcaaacgtaacccccaccaagggccca
atgtatggtgtgaaccgtatgccacctcagcagcatatgtatgcgtaccagccgcccact
cacactcctccattgcaaacagcccaagcctgcatttaccctcctcaagaacaagtcttt
ggcactcctctgcgatttgaatcaccagccacaagccttctttccccatatagtgaagaa
tattatggccagagtgtaacccaacaaaccactaaccctcctctacctgaacctggttac
ttcaccaagccgtctgtagcccctgttcagccaccaaagatagaggggaagcctatggac
ttagggaagctgtccttcagccagcacgcacctgctgaagtccccaaagtgccaagtttc
ggagctggggcaattgcccaatcaacaccttcagctgcttttaaattcaactccaacttt
aaatccaacgatggagatttcactttctccggttctcaggccaagcacagtgaaagtctg
cttggtcttcttacatcggacattcccactaaaacaaatgctattccagaggagcctcca
gctcaggaacagcactctaaccaatctggcattttcacctttggcactaaaggagccact
ggcttctcctttgttgatcctgcgcagaacgctgcaactggaggtctgtttggaaaggtg
gaccagccatttaaatttggggatgttgctaagccagtgtttgggttacccagttatgga
gcagaagcagaaaaggcagcagagagcgataatgacagcactcatgttgaggaggatgag
gatggtcctcattttgaacccattgtacctcttcctgataaagtagatgtgaaaaccggt
gaggaagaggaggaggagatgttttgcaacagggcaaagctgtatcgatttgacactgag
acaaaagagtggaaggagcggggaattggcaatgttaaaatcctaaaacacagcactaag
gggaaggtccgcctcttaatgagaagagaacaagtcctcaagatctgtgccaatcactac
atcaccgctgatatgctactgaaaccgaatgcaggctctgacaaatcctgggtctggaat
gccattgattatgcggatgaagagcctaagcctgagcagctggccatccgctttaaaaca
gtagatgaagcattacttttcaaagataagtttgaggaggcccagaaagttgtagtcaaa
tcaccggaaaagcacagtcaaccggagaagaaagaggaaagcataaaaggttctgaatca
ctggcagcccagtttgcacttaaagacggggagtgggattgcacagtgtgctgtgtaaga
aataaacccttggatattagatgtgttgcatgtcaaagtgcgaatcccaattcttcatca
aaaccagacattcaggctcctggtgaaaccaaagccagtccctttactttcaaattcggg
actgattcaacaaactccagtagttcgggctctacattttctggatttggtgcgtttggg
gcctctataccctcttcatttacgtttgggaccggcgcttcgaaatctgctgacacagta
accagtgcatttggttcttctttcggggctcagtttggaaagaagccagggcagtgggac
tgtgacatatgtgaagtaagaaacaaggcctctgcagacagttgtgtttcttgcaaagct
cataaagcctcagctaaaacaactgtgacagcacaaaccgaaccagctgcagaggcacct
gctgcgcagccctctgcatgtgcagcgaagtctgggtttggtggacagtttagcaagaag
cctgggcagtgggactgcgacgtatgtgaagtaagaaatgaagcctctgttgacaaatgt
gtcgcctgtcaaagccccaatcctgctgctaaatcaaccaaggggatttcagtggcatca
aatctgccagcagggtcaggatttggggctggttttgcaaagaatgatgagcagtgggac
tgcaatgcctgtctggtccgaaatgatgcaccggctactaaatgcgttgcctgccacacc
ccacttgagactccctctttagaagacatgtttgccaagaaggatggagaatgggattgt
gacacgtgtctggtgagaaacaaggcctctgtcaacaagtgtttggcttgtcagacacca
aatcccaatgctaaaagcacaactagctctgctccctcagcctccactttcagctttaac
tttggaaccaagggttcatcaagtcaacccactgaaactggattcacaatgccttttgga
actggcagcacttttcagtttggtcataacaaagataaaagctcagctccttccttcaag
tttgaaactcctcagtctggatctagcaccagtgcaagtaccagtgccagtaccagtgct
tcaggcttctctttctcaatgcccattccagctggtggtttcaagtttggcattcaggac
actgaaaaagacccccccacaactgaaaatcaaacccctccatcagggtctgcctccagt
tttcttaaaagcatagctgacaaacacaacgagaaacaagacacgtctacaccctcagtg
gaccaaacggaagtagatgaaaatccattagtttctggaaaaaaccctgcatttagtttt
gctgacctggcacagtcctctggcgcagacttccaatttggccagaaagacccagatttc
aaaggtttctctggggctggtaagcagttgttcacatcatttcaggctactcccaccaag
acggatgcctcaaatgacctggaggatgacgacatgtataagacagaggaaaatgacgat
attcagtttgaaccagtggttcagatgcccgataaggtggacctggtgactggggaggag
gatgaacaggttctttattctcagcgcgtcaaactgttcagatttgacaccgacaccagt
cagtggaaagagcgaggtgtgggaaccctcaaattcctgaaacacggcagtaatggcaga
ctcagggtgctcatgagaagagaacaggttctgaaggtgtgcgccaaccactggatcacc
accactatgaatcttaagcccttgtcgggatcagataaagcatggatctggatggccaac
gacttctctgatggagatgctaaactcgaacagttggctgccaagtttaaaagcccagag
cttgctgaggagtttaaagaaaagtttgaagaatgccagagacttcttttggacatcccc
ctacaaacaccccacaagctcgttgacacgggtagaactgcccatctcattcagaaagca
gaggaaatgaagtctggtttgaaggacctgaagttctttttgacggacgagaaaactaaa
atcaaagatgatgacaaccagggagggattacaacatcaggggatgtttcaagcctcgta
atcaaggctcacagtgaaactactggccccacattggagtgggataactacgacctacgc
gaagaggctttagatgatactgttgactcgtcagtctatgcctctcccattgccagcagc
cctctgagagagaaccttttccgctttggagaatccactagtgggttcaacttcagcttc
caacctggcatcagcccctccaagtctcctgctaagcctaaccagagcagagtgtcagtg
ggtactgacgacgaacaggatgtaagccaggatgaggatagggatggccagtactttgag
ccggtagtccctctgcctgatctggtggagatttccactggagaggaaaatgaactggta
gccttcagtcacagggccaagctgtatcgctacgataaggagctgggtcagtggaaggag
aggggtattggagacctcaagctcctgcagaattacggcaccaaacgagtgaggttgata
atgaggagagaccaggtacttaagatctgtgccaaccactggatcacagcagccatgaag
ctggagcctatgaaaggcgccgaaaaggcctgggtctggagcgccatggactttgcagaa
gaaggggcgggtaatattgagcagttggctgtgagattcaagctgcaggatacagcaaac
acattcaaacaggtctttgaggaggctaaggtcgcgcaagaaaaagaggaacttatgact
ccagcgacacccggagttgcctcacctcaagacagtggacctacagaattgccaaagact
gaaacagctgtatgtgggaaggcagccatcgccgttctggaagagaccacaaaagtacgt
acagagcttttccccgatgttcagccgtgtgcaccagagtctcccactccagccagcttc
tcaaagacggtggtgtcgcctcccaagtttgtctttggcaccgatagccttcagaagatt
tttggctctcctaaatccgagacagaggaatctgcgtccggtttgaaagccaaagatgtg
ggacgtcccgccaaggctacacttgcatcacctgcattcaaaatcccagggaaaggtccc
ccaaaggcagagggaggtgatgcagggtcgtatgaggactcggaagtggaggtcgtgtac
atcagagaacccactgctgagcaggcggctctcgctagtaaactcctgctgccgctcacc
ttcttctgctaccagaatgaacccggatactgcagcgacgatcagactgacgacgaggat
tacgagtcggcagtgaaagccctgaatggaaagctctaccgtgatcttcctgtgaaaaag
gctgcagcatgtagtgatgagccagactgccaggtggtgtgggagaagaagccaacgccg
cgggaggaggagaaggccaagagccttttgcttccacccactttcttctgcggcctcagc
accacagacagcgacacagaccatgacaagcccgaagactttgagacggaagtccgcaag
gcacagcaggacctggatgccgagctaaataaagtggggaaagcctccagcagcagagcc
ccagaggagctgatgccaggcctgtcatcctgcagcactgacgctgcaggcagcgtgttt
acaccacaggagcagacctcagaccagccagccgagacgccgagtcaagctccgatcagc
agcagctgccccattgacctgtcgaccaagaagagcccggagccggagtccaacactgaa
actgcagcttttactgctgctactactactgtaaccagtcaagactccggctttggcttc
aacacactcggtggcttctcattcgcagacctggcccataacacagaggggtttgcgttt
ggatcccaagacaccaacttctcgtgggcaaatgctggtgcgtcagtatttgggtcggcc
gtgtcttcagcaccaaaaaacaccggtgatgagggaagtgatgaagaggaggcttctaat
aatgaggacattcactttgaaccaatagtgtcacttccagaggtggagacaaagtccgga
gaggaggacgaggaaatcctgttcaaggagcgcaccaagctgtaccgatgggaccgggac
ctgggccagtggaaggagcgcggcatcggagacatcaagatcctcttccacccggccaaa
cgcttctaccgaatcctgatgcgaagagagcaggtgctgagggtttgtgccaaccacacc
atctccgagacgatggagctcaaacccatgaactcctcagcaaacgcactggtgtggacc
gccaccgactactcagacggcgatggcgaagtggagcagctggcagccaagttcaaaacc
ccagagatagcggaatccttcaagaagacgttctgcgattgtcagagccgaatcagcagt
gacgactcgtgcgtcacctcgccgcaaatgtcaagagttcaagagcattccagagacagt
aatccacgggtgttcctcaacgtgtccgccgacggccagacactgggcaccgtcaccatc
gagctcttctcccacattgtgcccaagacggcagaaaacttccgggccctctgcaccgga
gagaaaggcttcggactgcgagactccatcttccacagagtcataccggacttcatgtgt
cagggcggtgacatcacaaacgccgacggcacaggaggcaagtccgtgtatggcagcaag
tttgaggacgagaactttgacatccggcacacgggcccaggtatcctgtcgatggccaac
cgggggcgcgacaccaacaactctcagttcttcatcacgctgaagaaggccgaacacctg
gacttcaaacacgtggccttcggctgggtgcgggacggcatggacgtggtgcagcagatg
ggagagctgggaaccaaggggggcttgccctccaagaagctggtcatcgccgactgtggg
cagctgtag
DBGET
integrated database retrieval system
