Shewanella marisflavi: CFF01_00100
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Entry
CFF01_00100 CDS
T05400
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
smav
Shewanella marisflavi
Pathway
smav00071
Fatty acid degradation
smav00280
Valine, leucine and isoleucine degradation
smav00310
Lysine degradation
smav00362
Benzoate degradation
smav00380
Tryptophan metabolism
smav00410
beta-Alanine metabolism
smav00640
Propanoate metabolism
smav00650
Butanoate metabolism
smav00907
Pinene, camphor and geraniol degradation
smav00930
Caprolactam degradation
smav01100
Metabolic pathways
smav01110
Biosynthesis of secondary metabolites
smav01120
Microbial metabolism in diverse environments
smav01200
Carbon metabolism
smav01212
Fatty acid metabolism
Module
smav_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
CFF01_00100 (fadB)
00650 Butanoate metabolism
CFF01_00100 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
CFF01_00100 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
CFF01_00100 (fadB)
00310 Lysine degradation
CFF01_00100 (fadB)
00380 Tryptophan metabolism
CFF01_00100 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
CFF01_00100 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
CFF01_00100 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CFF01_00100 (fadB)
00930 Caprolactam degradation
CFF01_00100 (fadB)
Enzymes [BR:
smav01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
CFF01_00100 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
CFF01_00100 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
CFF01_00100 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
CFF01_00100 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_Gly3P_dh_N
NAD_binding_2
Pox_F12L
Motif
Other DBs
NCBI-ProteinID:
ASJ95115
UniProt:
A0AAC9TT50
LinkDB
All DBs
Position
complement(21991..24141)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIARLCFNAEGSVNKFDRETLNALSDALDALKQTQEVKGLMLTSG
KDAFIVGADITEFLGLFAQEDSVLLGWLEDANKVFNKLEDLPFPTISAIKGFALGGGCET
ILATDLRIADTTARIGLPETKLGIIPGFGGTVRLPRLIGADNALEWITTGKDQRPESALK
VGAIDAVVAPEALESAALQMLHDAINEKIDWQARRQRKLSPLTLPKLEAMMSFATAKGMV
FKVAGKHYPAPMAAVDVIEKAATSERAQALQVEHQAFIKLAKTDVAKALIGIFLNDQLVK
GKAKKAAKQAQAVNSAAVLGAGIMGGGIAYQSASKGTPIVMKDINQAALDLGLGEAAKLL
TAQINRGRSTPAKMAGVLNNITATLDYNALKQADVVVEAVVEHPKVKSSVLAEVEQVVGE
DAIITSNTSTISINLLAKSLQKPERFCGMHFFNPVHKMPLVEVIRGEHSSDETIASVVAY
AAKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLEDGADFTAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMAKQGKDAIDVMFEAERFGQKNSKGFYQYSVDRRGKP
KKDVDPLSYELLGNAFGERKEFSSDEIIARTMIPMIIETVRCLEEGIIASPAEADMGLVY
GLGFPPFRGGVFRYLDTLGVANFVALADKYAHLGGLYQVTDKMRELAANNGSYYPA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacgattcaagtggaattacttgaagacaatatcgctcggctc
tgttttaacgccgagggctcagtcaacaagtttgatagagaaaccctcaatgcgctaagc
gacgcactcgatgccctaaagcaaacccaagaggtcaaagggctgatgctcacctcgggt
aaagacgccttcatcgtaggcgccgatatcacagagttcttaggactttttgcacaggaa
gacagtgtgctacttggctggctcgaagatgccaacaaggtattcaataaattagaagat
ctgccgttcccaactatctcggctatcaaaggctttgccctgggcggcggctgcgaaact
atcctagcaaccgacctacgtatcgcagatacaacggctcgaatcggtctgcctgagacc
aaactaggcatcatcccaggttttggcggtaccgtgcgtctgcctcgtctaatcggtgcc
gacaacgccctggagtggatcaccacaggtaaagatcaacgccctgagtcagcccttaag
gttggcgccatcgacgcggttgtcgcccctgaagcactggaaagtgcagcactgcagatg
ctacatgatgccatcaacgagaagatcgattggcaagctcgtcgccagcgcaagctgtca
ccgcttacgctgccgaaactggaagccatgatgtcttttgctaccgccaaaggcatggta
ttcaaagtcgctggcaaacattatcccgcgcctatggcggctgtggatgttatcgaaaag
gcggccaccagtgaacgcgcccaggcgctgcaggttgagcatcaagcctttatcaagctc
gccaagacagatgtggccaaggcacttatcggtatcttcttaaacgaccagctggttaaa
ggtaaggcgaagaaggcagctaaacaagcacaggcggtaaactcggcagcagtgttgggt
gcaggcattatgggtggcggcatcgcctatcaaagtgcgagcaaaggcacccccattgtg
atgaaagacattaatcaggccgcgttagatcttggtctgggcgaagccgctaaactgctt
acggcgcagatcaaccgtggtcgctctacccctgctaaaatggcgggcgtgctaaacaat
attacagcgacactggattataacgcgcttaaacaggccgacgttgtcgttgaagccgtg
gttgaacaccctaaagtaaaatcaagcgtattggccgaagtagaacaagtcgtgggcgaa
gatgccatcatcacttcgaacacctcgaccatctccatcaacctactggctaagagcctg
caaaagcccgagcgcttctgtggtatgcacttcttcaacccggtccataaaatgccgctg
gttgaggtaattcgcggtgagcatagctcagatgaaaccatcgcctctgtggtcgcttac
gccgccaagatgggtaagacgcctatcgtggtcaacgattgcccaggtttcttcgtcaac
cgagtgctcttcccctacttcgccggcttcagtggcctgctagaggatggcgctgatttc
acagccatcgacaaggtaatggagaaacagttcggctggccaatgggcccagcttatctg
ctggatgtggttggtctggacacaggtcaccatgcacaagctgtgatggccgaaggtttc
cctgacagaatggccaaacagggtaaagatgctatcgacgtgatgttcgaagcagagcga
ttcggtcaaaagaatagcaaaggcttttatcaatactcagtcgatcgccgcggtaagcca
aagaaagacgttgatcctctaagctatgaattgctgggcaacgcctttggtgagcggaaa
gaatttagcagtgatgagatcatcgcacgcaccatgatccctatgatcatcgaaacggtt
cgttgtctggaagaaggtattatcgcctcgccggccgaagccgacatgggactggtttac
ggactcggtttccctccatttagaggaggtgtgttccgctatctagacaccttaggtgtt
gccaactttgtcgccctagcagacaagtacgcccacctaggcggcctgtatcaggtgaca
gacaagatgcgtgaactggctgccaacaacggcagttactacccagcctaa
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