Shewanella marisflavi: CFF01_02095
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Entry
CFF01_02095 CDS
T05400
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smav03032
]
CFF01_02095
03036 Chromosome and associated proteins [BR:
smav03036
]
CFF01_02095
03400 DNA repair and recombination proteins [BR:
smav03400
]
CFF01_02095
DNA replication proteins [BR:
smav03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CFF01_02095
Chromosome and associated proteins [BR:
smav03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CFF01_02095
DNA repair and recombination proteins [BR:
smav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CFF01_02095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
NA37
Motif
Other DBs
NCBI-ProteinID:
ASJ95473
LinkDB
All DBs
Position
complement(456052..456324)
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELVAKIAESAELTKAEAARALKSFEETVAEAMKNGEKISIVGFGSFETTSRAARTG
RNPQTGKEIQIPAAIVPKFKAGKTLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaactgaacttgttgcaaaaatagcggaaagcgctgaacttactaaagctgaa
gctgctcgcgccttaaaatctttcgaagaaacggtagcggaagcgatgaagaacggcgaa
aaaatctctattgtaggttttggctctttcgagaccactagccgcgcagcacgtacaggc
cgcaacccacagacgggcaaagaaattcagatcccagcggccatagtacctaagtttaaa
gccggtaagacgttaaaagacagcgtaaactaa
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