KEGG   Shewanella marisflavi: CFF01_02095
Entry
CFF01_02095       CDS       T05400                                 
Name
(GenBank) DNA-binding protein HU
  KO
K03530  DNA-binding protein HU-beta
Organism
smav  Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:smav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:smav03032]
    CFF01_02095
   03036 Chromosome and associated proteins [BR:smav03036]
    CFF01_02095
   03400 DNA repair and recombination proteins [BR:smav03400]
    CFF01_02095
DNA replication proteins [BR:smav03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    CFF01_02095
Chromosome and associated proteins [BR:smav03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    CFF01_02095
DNA repair and recombination proteins [BR:smav03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      CFF01_02095
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-DNA_bdg HU-CCDC81_bac_2 HU-CCDC81_euk_1 NA37
Other DBs
NCBI-ProteinID: ASJ95473
UniProt: A0AAC9TWX4
LinkDB
Position
complement(456052..456324)
AA seq 90 aa
MNKTELVAKIAESAELTKAEAARALKSFEETVAEAMKNGEKISIVGFGSFETTSRAARTG
RNPQTGKEIQIPAAIVPKFKAGKTLKDSVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaataaaactgaacttgttgcaaaaatagcggaaagcgctgaacttactaaagctgaa
gctgctcgcgccttaaaatctttcgaagaaacggtagcggaagcgatgaagaacggcgaa
aaaatctctattgtaggttttggctctttcgagaccactagccgcgcagcacgtacaggc
cgcaacccacagacgggcaaagaaattcagatcccagcggccatagtacctaagtttaaa
gccggtaagacgttaaaagacagcgtaaactaa

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