Shewanella marisflavi: CFF01_02235
Help
Entry
CFF01_02235 CDS
T05400
Name
(GenBank) histidine kinase
Organism
smav
Shewanella marisflavi
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
HATPase_c
PAS_3
HisKA
PAS
PAS_4
PAS_9
PAS_8
dCache_1
MCP-like_PDC_1
PDE8A_N
DUF3563
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
ASJ95497
UniProt:
A0AAC9XM28
LinkDB
All DBs
Position
484972..488664
Genome browser
AA seq
1230 aa
AA seq
DB search
MKSTEPDLQLKSPIQKNYNRAVFYTYIGVIIMALLTAWIFFERQKTQMMDQREELVERHV
LQIDLLLESSIRAVKSLRNVAVDHLRLGELVRTDRLPQYEKFNESGQFFTLEPSYAQSGK
PFTNMGRITGAGSLNGRSDKFYQELEMLFELSLSFPVARQAAPKASSIYYISKHRMMSYY
PWPSDEQRFRDELLKKQQFQLVTPAMNPQRSVAWSPAYVEPNGKGLLTTVGVPIYLEDEF
IGSINLDMTLSSLDKQIRLYFKMPGTVILLDQQNNILSHSDINAADINRVFHISQKIPSA
LHSVPESELFDAHEGIMRNGYYIHSVALQNAPWRLLYLQDENELFKDSWEKLELTFLLVV
IALSVLVTIVHWQTRRSFVNPASRLLSHLEGCSQEPRKPPAKITQGWEPWFQLVSRIFEE
NQQYTRHLAEQNRRLDNLVARRTERLRETTERREREYALLRSLLDSIPEAIVFKDKEGKC
LGCNKSAERMLGFTESEMIGQDTLAMTSNEQSMRIRAEDERVLSERTPLRYQEKVELAGK
PVLLDTLKLPFYNRRGELLGLIAVWRDVTREYESAEQLRLSEERYHLAMDAVEDGLWDWY
LDSEQIICNPAYYTMLGYKSNEFPALVSTIDDLVHPDDRIRVEEYREQYLADPIGAYDIE
FRMRGKSGMYHWVLSRGRVVEFTADNQPKRMVGTHKDITRHKSNEVALLEAKQDAESANL
YKSEFLANMSHEIRTPMNAIIGMLQLASRTQLTPQQADYLDKAGFSAQSLLRIINDILDF
SKIEAGKLELERVAFPLDKVLDHALDLNALKAQEKGVELLLYAPVTAGLILEGDPLRLGQ
VLINMLSNAVKFTQSGEIELGCEDVGERDHRITLKFWVRDTGIGISKEQQESLFDAFAQA
DGSTTRKYGGTGLGLSISKHLVSMMGGTMQVQSELGVGSTFSFTISFEIAEEAEVKPLIV
PEVIGNLKTLVVDDNPTALQIYSTAMRDFHFDVDTASNGAEALYKLEHRPVDLLLLDWMM
PEMDGIEVIRALDAMVADGRLEKRPVIIMMTAYASEPLKEDLDDLDIYAMLQKPFKASAL
FDEIIAAFIDKPKINPAVELPAEGNATGSGQILLVEDNFINQQVATELLKSAGYEVDVAE
NGQIALDMVDAKQYDAVLMDIQMPVMDGLTATKELRKRYSKEELPVIAMTAHAMSGDREK
SLAAGMNAHITKPIVLNELFDTLAHWIVRH
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgacagagccggacttacagcttaagtctccgattcaaaaaaactataatcgc
gcggttttttatacctatatcggcgtgatcatcatggcgttgctgacggcctggatcttc
ttcgagcgtcagaagacgcagatgatggatcagcgcgaagagctggttgagcgtcatgta
ttgcagatcgacttgttgttggagtccagcatccgcgcggtaaagagcctgcgcaatgtg
gcggtggatcacctgcgtctgggtgagttagtgcgtaccgaccgcctgccccaatatgaa
aaatttaatgaaagcggtcagttttttaccttagaacccagctatgcccagagcggtaaa
ccctttaccaacatggggcgcattaccggagcggggtcgctcaatggtcgcagcgataag
ttctatcaggagttggagatgctgttcgagctctcgctctccttcccggtcgccagacag
gcggcccccaaggcctcctctatctattacatctccaagcacaggatgatgtcttactat
ccctggccatcagatgagcagcgctttcgcgatgaactgctgaagaagcagcagttccag
ctggtcaccccagccatgaaccctcagcgcagtgtggcctggagtccggcctacgtagag
cccaacggcaagggcttgttgacgacagttggtgtgcccatctatctggaagatgagttt
atcggctccattaacctggatatgacgctctcctccctggataagcagatccgtctctac
ttcaagatgccgggcacagttatcttgctggatcagcaaaacaatattctctctcatagc
gatatcaacgccgccgacatcaatcgggtgttccatatcagccaaaagatcccctcggcg
cttcactctgtgcccgagtctgagctgttcgatgcccacgaagggatcatgcgcaacggt
tactatattcactcggtggccctgcaaaatgccccttggcgtctgctctatctgcaggat
gaaaatgaactgttcaaagattcctgggagaagcttgagctgaccttcctgctcgtggtg
atcgccctgtcggttctggtgaccatagtgcactggcagacccgccgctctttcgttaac
cctgcttctcgcctcttgtcgcatctcgaggggtgttctcaggagccgcgcaagccaccc
gccaagatcacccaaggctgggaaccctggttccagctggtgagtcgaatatttgaagaa
aaccagcagtatacacggcacttggccgagcagaaccgccgcctggataatctggtggcg
cggcgcaccgaacgactgagagagaccacagagcgacgagagcgggaatacgctttgctg
cgctccctgctcgactctatccctgaggcgattgttttcaaggataaagagggtaaatgt
cttggctgtaacaagtcggccgagcgcatgctgggctttactgagagcgagatgataggt
caggatacgttggcgatgaccagcaacgagcagtcgatgcgtattcgcgccgaagatgag
cgtgtcttgtccgaacgcacgccgcttaggtatcaggagaaggtcgagctggccggtaag
ccagtattgctagacacgcttaagctgcctttctacaaccgtcgcggtgagctgctgggc
cttatcgccgtgtggcgtgatgtcacccgtgaatatgaatctgccgagcagctcaggctg
tcggaggagcgttaccatctggcgatggacgcggtagaagatggcctgtgggactggtat
ctggattccgagcagatcatctgtaacccggcctactacaccatgctcggctataagagc
aatgagttcccggccctggtgtcgactatagacgatctggtgcatcccgatgaccgcatt
cgcgtcgaggagtatcgtgagcagtatttggccgatcctatcggtgcctatgatattgag
ttccgtatgcgcggtaagagtggcatgtatcactgggttctcagccgtggccgtgtggtg
gagtttactgctgacaatcaacctaagcgtatggtgggtactcataaggatattacccgt
cataagagtaacgaggtggcgctgctggaagccaagcaggacgccgaatcggccaacctt
tacaagagtgagttcctggccaatatgagccacgagatccgcacgccgatgaacgccatt
atcggtatgttgcagctggccagtcgcacccaattgacgccgcagcaggcggattatctg
gataaggccggtttctcggcgcaatcattgctgcggatcatcaacgatattctcgatttc
tctaagattgaggccggtaagcttgagcttgaacgagtcgccttcccactggataaggtg
ctggatcacgcgctggatctcaacgccctcaaggctcaagagaagggcgtcgaattactg
ctttacgccccagtcactgcaggcttgatcctcgaaggggatccgctgcgtctcgggcag
gtgttgatcaacatgctcagcaatgcggtgaagtttacccagagcggtgaaatagagctg
ggctgtgaagatgtgggcgagcgcgatcatcgcattaccctcaagttctgggtgcgtgat
accggcatagggatcagcaaggagcagcaggaaagcctgttcgatgccttcgcccaggcc
gatggctcaaccacccgcaaatatggcggcacaggcctagggctctccatcagtaaacat
ctggtgtccatgatgggcggtactatgcaggtgcagagtgaattgggggtcggcagtacc
ttcagcttcaccatcagcttcgagatcgccgaagaggccgaggtgaaaccgcttatcgtg
cccgaggtgataggtaatctgaagacacttgtggtggacgataacccgacggcgctacag
atctactcgaccgccatgcgagacttccacttcgacgtggataccgcctccaatggtgcc
gaggccctgtataaactggaacacaggccggtggatctcctgctgctggactggatgatg
cctgagatggatggcatagaggtgattcgagcgctcgatgccatggtggccgacggtcgc
cttgagaagcgcccggtgatcatcatgatgaccgcctacgcctccgagccgcttaaggaa
gacttggacgatctcgatatctacgccatgctgcaaaagccatttaaggcttcggcactg
tttgacgagatcatcgccgcctttatcgacaagccgaagatcaatccggcggtggagctg
cccgcagagggcaatgccacgggctcggggcagatattgttggtggaagataactttatt
aaccagcaggtggccaccgagctgcttaagagcgcgggttatgaggtggatgtggccgaa
aatggtcagattgcattggatatggtggatgccaagcagtacgacgcggtattgatggat
atccagatgcctgtgatggacggtctgacggcgaccaaagagctacgtaagcgttactcg
aaggaggagctgccggtgatcgccatgacggcccatgccatgtcgggcgatcgagaaaag
agtctggcggcgggtatgaatgcccatatcactaagcctatcgtgctcaatgaattgttc
gataccttggctcactggatagtgcgtcactag
DBGET
integrated database retrieval system
