Shewanella marisflavi: CFF01_02275
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Entry
CFF01_02275 CDS
T05400
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
smav
Shewanella marisflavi
Pathway
smav03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFF01_02275 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
smav03019
]
CFF01_02275 (groL)
03110 Chaperones and folding catalysts [BR:
smav03110
]
CFF01_02275 (groL)
03029 Mitochondrial biogenesis [BR:
smav03029
]
CFF01_02275 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smav04147
]
CFF01_02275 (groL)
Enzymes [BR:
smav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CFF01_02275 (groL)
Messenger RNA biogenesis [BR:
smav03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CFF01_02275 (groL)
Chaperones and folding catalysts [BR:
smav03110
]
Heat shock proteins
HSP60 / Chaperonin
CFF01_02275 (groL)
Mitochondrial biogenesis [BR:
smav03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CFF01_02275 (groL)
Exosome [BR:
smav04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CFF01_02275 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CFF01_02275 (groL)
Exosomal proteins of breast cancer cells
CFF01_02275 (groL)
Exosomal proteins of colorectal cancer cells
CFF01_02275 (groL)
Exosomal proteins of bladder cancer cells
CFF01_02275 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ASJ95504
UniProt:
A0AAC9TXY2
LinkDB
All DBs
Position
496012..497661
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKEVLFGNDARVKMLAGVNVLANAVKVTLGPKGRNVVLDKSFGAPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVTEGLKAVAAGMNPMDLKRGI
DKAVVAAVAELKTLSQECSDTKAIAQVGTISANSDESIGEIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELENPYILLVDKKISNIRELLPILEGL
AKTGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV
IAEEIGLELEKATLEDLGTAKRVVITKDDTTIIDGNGEQEQISARVAQIKIQAEESTSDY
DREKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKIGEVEVANEDQKHGVTIALRAMEAPLRQIATNAGEEASVVANNVKNGSGNYGYNA
GSDVYGDMLEMGILDPTKVTRSALQFASSIAGLMITTEAMVGEVPQEAGAGDMGGMGGMG
GMGGMGGMM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttttatttggtaatgatgctcgcgtaaaaatgcttgcgggcgta
aacgtactggctaacgcagttaaagtcaccctgggccctaaaggccgtaacgtagtgcta
gacaagagcttcggcgcaccactgatcaccaaagatggtgtatcggttgctaaagagatc
gaactagaagacaagttcgaaaacatgggcgcccaaatggtgaaagaagttgcttctaaa
gccaacgacgctgctggtgacggtactactaccgctaccgtactggcgcaagctatcgtg
accgaaggtctgaaagccgttgccgctggcatgaacccaatggatcttaagcgtggtatc
gacaaggcggttgttgctgctgttgccgagctgaagaccctgtctcaagagtgtagcgac
actaaggcgattgctcaggtaggtactatctctgctaactctgacgagtcaatcggtgaa
atcatcgcaactgcgatggaaaaagtcggtaaagaaggcgtgatcaccgttgaagaaggt
caggcgctagagaacgagctggacgtggttgaaggtatgcagttcgaccgtggttacctg
tctccatacttcatcaacaagccagaaactggcagcgttgaacttgaaaacccatacatc
ctattggttgacaagaaaatttctaacatccgtgagctactgccaatccttgaaggcctg
gcgaaaacgggtaagccactgatgatcatcgccgaagacgttgaaggcgaagccttagcg
actctggttgtgaacaacatgcgcggtatcgttaaggttgctgcggttaaggcaccaggt
ttcggtgaccgtcgtaaggcgatgctacaagatatcgctatcttgactggcggtactgtg
attgccgaagagatcggtctagagcttgaaaaagcgactctggaagacctaggtacagct
aagcgcgttgtgatcaccaaagatgacactaccatcatcgacggtaatggtgagcaagag
cagatctctgcccgtgttgcccagatcaagatccaggcagaagaatctacttctgactac
gacagagagaagctacaagagcgtatggctaagctagccggcggtgttgcagtgatcaaa
gttggtgcggctaccgaagttgaaatgaaagagaagaaggctcgcgtagaagatgcgcta
cacgcgactcgcgccgccgttgaagaaggtgtggttgctggtggtggtgttgccctgatc
cgcgttgcctctaagatcggcgaagttgaagtggctaacgaagaccagaagcacggtgta
actatcgcactgcgcgccatggaagcgcctctacgtcaaatcgcaaccaacgcgggtgaa
gaagcctcagtggtagcgaacaacgtgaagaacggctctggtaactatggttacaacgct
ggtagcgacgtatacggtgacatgctagagatgggtatccttgacccaactaaagtgact
cgtagcgcactacagttcgcgtcatctatcgcaggtctgatgatcactactgaagctatg
gtaggtgaagttccacaagaagctggtgccggcgatatgggcggcatgggcggaatgggt
ggtatgggcggtatgggcggcatgatgtaa
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