Shewanella marisflavi: CFF01_02560
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Entry
CFF01_02560 CDS
T05400
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
smav
Shewanella marisflavi
Pathway
smav03030
DNA replication
smav03430
Mismatch repair
smav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFF01_02560
03430 Mismatch repair
CFF01_02560
03440 Homologous recombination
CFF01_02560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
smav03032
]
CFF01_02560
03400 DNA repair and recombination proteins [BR:
smav03400
]
CFF01_02560
03029 Mitochondrial biogenesis [BR:
smav03029
]
CFF01_02560
DNA replication proteins [BR:
smav03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CFF01_02560
DNA repair and recombination proteins [BR:
smav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
CFF01_02560
TLS (translesion DNA synthesis) factors
Other SOS response factors
CFF01_02560
Mitochondrial biogenesis [BR:
smav03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
CFF01_02560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ASJ95554
UniProt:
A0AAC9TY18
LinkDB
All DBs
Position
572802..573470
Genome browser
AA seq
222 aa
AA seq
DB search
MASRGVNKVILVGNLGKDPEVRYMPNGNAVANFTVATSESWKDQQGQMQERTEWHNIVMY
RRLAEIAGEYLKKGSKVYLEGKLQTSKWQDQQTGQDRYKTEINVNEMQMLDSRAQGQGGQ
GGQQGYGAPQQNQYAPQQSAPAPRAQPQSQSQPQPSGAAPQGGYGAPQQAAPQQGYGAPA
APAYAPKPQAAPQQAPQQRPAPQPQQNFTPDLDDGWDDDIPF
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgtcaataaggtaattttggtcggtaacttagggaaagatcccgag
gttcgttacatgccaaacggcaacgccgtagccaactttacagtggcgaccagtgagtct
tggaaagaccaacaaggtcagatgcaagaacgtacagagtggcacaacattgtaatgtac
cgtcgtcttgctgagatcgccggtgagtacctgaagaagggctcaaaagtttatcttgaa
ggcaagctgcagaccagcaagtggcaagatcagcagacaggccaagatcgctataagaca
gagatcaatgtcaacgagatgcagatgcttgatagccgtgctcaaggtcaaggcggtcaa
ggtggtcagcaaggttatggtgcaccgcagcagaaccagtatgcgcctcagcaatcggct
ccagcgccacgtgcacaaccacaatcacaatcacaaccacagccatcgggcgcagcgcct
cagggtggatatggcgcgccgcagcaagcggcaccacaacaaggttatggcgcaccagcg
gcaccagcctacgctcctaagccacaggcggcgccgcaacaagcaccgcagcaacgtcct
gcgccgcagcctcagcaaaacttcacgccggatctggatgatggctgggacgacgatatc
ccgttctag
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