KEGG   Shewanella marisflavi: CFF01_02935
Entry
CFF01_02935       CDS       T05400                                 
Name
(GenBank) ATP-dependent RNA helicase DbpA
  KO
K05591  ATP-dependent RNA helicase DbpA [EC:5.6.2.6]
Organism
smav  Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:smav00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:smav03009]
    CFF01_02935
Enzymes [BR:smav01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     CFF01_02935
Ribosome biogenesis [BR:smav03009]
 Prokaryotic type
  rRNA helicases
   CFF01_02935
SSDB
Motif
Pfam: DEAD Helicase_C DbpA Cas3-like_C_2 ResIII AAA_30 AAA_22 CMS1
Other DBs
NCBI-ProteinID: ASJ95622
UniProt: A0AAC9TYD7
LinkDB
Position
646493..647899
AA seq 468 aa
MSQSDATTPSGAFDSLPLKPALLETLQSIGFYQMTPIQAQSLPAILNGQDVIGQGKTGSG
KTAAFGLGLLNRLDVKRFRIQSLVMCPTRELADQVAAELRTLARGIHNIKILTLCGGVPM
GPQIGSLEHGAHIIVGTPGRIIDHLDRGRLDLDNVNMLVLDEADRMLEMGFQRELDAIMQ
SVPRERQTLLFSATFPEQIQGLSEQIMIDPLMVKVEAQHDSESIKQHFYECGNNNDRMKA
LQLLLLAHRPESAVVFCNTKRETKDVAAKLINAGFSVVSLHGDLEQRDRDQMLLKFANKS
ANIMVATDVAARGLDIDALDMVVNYHVAYDTEVHIHRIGRTGRAGSKGAAYTFFNHEDGY
KITLLADLIGREIDGEELPDESLLNTLPPQPRMVTIQIDGGKKQKVRPGDILGCLTGDNG
IEGSEVGKIKITEFRSYVAVDRKVLRKALNKIVKGKLKGKSYRAWELN
NT seq 1407 nt   +upstreamnt  +downstreamnt
gtgagtcaatctgacgctactacgccaagcggggcttttgatagcctgccgctaaaaccc
gctttgcttgagaccctgcaatccataggcttttatcagatgacgcctattcaggcccag
agtctgcctgccattctcaatggacaggatgtcataggtcaggggaagacggggtcgggt
aagacggccgcctttggtttagggctgcttaaccgtctggatgtgaagcgttttcgtatt
cagtctctggtgatgtgtcctacccgtgagctggcagatcaggtggcggctgagctacgc
accctggcgcgcggtattcataacattaagatcctcaccctgtgtggtggtgtgcctatg
gggccgcagattggctcgttggaacacggagcccacattatagtgggtaccccgggacgc
attatcgatcacttagacagaggtcgtttagatctcgacaacgtcaacatgttggtgctc
gacgaggcggatcgtatgctggagatgggttttcagcgcgagctggatgccatcatgcag
tcggtgccgcgcgagcgacaaaccctgctgtttagcgccaccttccccgagcagatccaa
gggcttagcgagcagatcatgatcgaccccctcatggtgaaggtcgaggcccagcatgac
agcgagagcatcaagcagcatttctacgagtgcggcaataacaatgatcgcatgaaggcg
ctgcagcttctgctgttggctcatcgccccgagagcgctgtggtcttctgtaataccaag
cgtgaaaccaaagatgtggcggcgaaattaattaatgccggttttagtgtggtgtcactg
cacggcgatctggagcaacgggatcgcgaccagatgctgctcaagtttgccaacaagagt
gccaacatcatggtggcgaccgacgtagccgctcgcggcctagatatcgacgccttagac
atggtggtcaactaccatgtggcctatgacacagaggtgcacattcaccgcatcggccgc
accggacgtgccggcagcaagggcgcggcctacaccttctttaatcacgaagatggttac
aagataacactactggcggaccttattggccgcgagatagacggcgaagagttaccagac
gaaagtctgctaaataccctgccgcctcagcctagaatggtcaccattcagatcgatggt
ggtaagaaacagaaggtacgtccaggcgatatcttaggctgcctcaccggtgacaacggc
atcgagggcagtgaagtgggtaagattaagatcaccgagtttcgctcctatgtggcggtg
gatcgtaaagtgctgcgcaaggcgctcaataagatcgtcaaaggtaagctcaagggtaag
agttatcgggcgtgggaattgaattaa

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