Shewanella marisflavi: CFF01_03760
Help
Entry
CFF01_03760 CDS
T05400
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
smav03009
]
CFF01_03760
Enzymes [BR:
smav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CFF01_03760
Ribosome biogenesis [BR:
smav03009
]
Prokaryotic type
rRNA helicases
CFF01_03760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_RecD
AAA_22
PhoH
AASDHPPT_N
Motif
Other DBs
NCBI-ProteinID:
ASJ95776
UniProt:
A0AAC9TZA4
LinkDB
All DBs
Position
complement(841118..842344)
Genome browser
AA seq
408 aa
AA seq
DB search
MQFEDFHLDDTLLESLKAMGHLTPTTIQQQTIPLALEHKDIMARAPTGTGKTASFLLPAL
QHLLDFPRRFSGHARVLILTPTRELASQVHRYASHLATGLDLDIAIITGGVPYAPQEKAL
KDNIDILVATPGRLMEYLDKDLFDAQSVEILVIDEADRMLDMGFSSVVQAIAIQAQGRKH
NMLFSATLEGGGVSRFAEMLLSNPITIETKPPRSEKAKIHQWLHLADDKDHKFALLCDIL
KREEVSRAIVFVKTRDVVASLEGQLQQAGITCAFMRGDMEQKARFQALGRFTKGEVNVLL
ATDVAARGIDIDGITHVINFDMPRSADTYVHRIGRTGRAGNKGTAISLAEAHDMRVVAKI
ERYIEQPLKRRVIDSLRPKHKEAKIPTKKKAKSADKKTAKKGKAKKKG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttgaagatttccaccttgacgacaccctgcttgagtcgctcaaggcgatgggg
catcttacccccacgaccatccagcaacagacgattccgttagctctggaacataaagat
attatggccagggcaccaaccggaaccggtaaaactgccagcttcctgctgccagcgttg
caacatctgctggacttcccacgtcgattctctgggcatgcgcgcgtgttgatcctcact
cctacccgtgagctggccagccaggtacacagatacgcctctcacctggcaacaggactg
gatctggatatcgccatcatcaccggcggtgtgccttatgcccctcaagagaaggcgctc
aaggacaatatcgacattctggtggcaacaccgggccgtttgatggaatatctggataaa
gaccttttcgatgcgcaatcggttgagatcttagtgatcgacgaagccgaccgcatgttg
gatatgggcttctcctctgtggtgcaggcgatcgctatccaggctcaagggcgtaaacac
aatatgttgttttctgcgaccctcgaaggcggcggcgtcagtcgatttgccgagatgctg
ctgtcgaatcccatcaccatagaaaccaagccgccgcgcagcgagaaggccaagatccat
caatggttgcaccttgccgatgacaaggatcataagtttgccctgctgtgcgatatcctc
aagcgcgaagaggtgagtcgtgccatcgttttcgtcaagacccgtgacgttgtcgccagc
ctcgaaggccagctgcaacaggcagggatcacctgcgcctttatgcgcggcgacatggag
cagaaggcacgttttcaggctctgggccgattcaccaaaggggaagtcaatgtgctgctg
gccactgacgtagcggcccgcggtatcgatatcgacggcatcacccatgtgatcaacttc
gacatgccacgctcggccgacacctatgtacaccgcatcggccgtaccggtcgcgccggc
aacaaaggcacggcgatctctctggctgaagcccatgacatgcgtgtagtggctaaaatt
gaacgctatattgagcagccactgaaacgtcgagtcatcgattcactgcggcctaaacac
aaagaagccaagatccccaccaagaaaaaggccaagagcgcggataagaaaaccgccaag
aaaggaaaggccaagaaaaagggctaa
DBGET
integrated database retrieval system
