Shewanella marisflavi: CFF01_03775
Help
Entry
CFF01_03775 CDS
T05400
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
smav03036
]
CFF01_03775 (xerD)
Chromosome and associated proteins [BR:
smav03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
CFF01_03775 (xerD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Integrase_1
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
ASJ95778
UniProt:
A0AAC9TXV9
LinkDB
All DBs
Position
845056..845940
Genome browser
AA seq
294 aa
AA seq
DB search
MDPLIEPFLDDLWAAKGLSDHTLQAYRSDLCHFDRYLQKQRLTLSSAAQGDVRAYLAQRV
EQGFAKTSSARLLSSLRRFYKYLLAKKLIELDPMAMIKPPKLARKLPDSLSEADVERLLD
EPNIEDPVEARDRAMLELLYASGLRVSELVGLTLDQMSLRQGVVRIVGKGGKERLVPFGE
QAVAEIEAYLKSARFELLKGKASDVVFPSKRGNMMTRQTFWHRIKLYAQRAGIAVHLSPH
TLRHAFATHLLNHGADLRVVQLLLGHSDLSTTQIYTHVAKARLAQLHQAHHPRG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggacccgcttatcgagccctttctggatgatctttgggccgccaaggggctaagcgat
catacccttcaagcctatcgtagtgacctgtgccatttcgaccgttatctgcagaagcag
cgcctgacactcagcagcgccgctcagggtgatgtacgtgcctatctggcccagcgagtc
gagcaaggctttgctaagaccagcagcgccagactgctcagcagtttaagacgtttctat
aagtacctgttagccaagaagctgattgagctcgatcccatggcgatgatcaagccgccc
aagttggcgagaaagctgcccgactccctaagtgaggccgatgtggagcggctactggat
gaacccaatatagaagatcccgtcgaggccagggatcgtgccatgctagagctgctctat
gccagtgggctgcgggtgtctgagctggtggggctgaccttagatcagatgagcctaagg
caaggcgtggtgcgcatcgtcggtaaggggggcaaagagcgcctggtgccctttggtgaa
caggctgtggcggagatcgaagcctatcttaagtctgccagatttgagttgttaaaaggg
aaggccagcgatgtggtgtttccctcaaaacggggcaatatgatgacgcggcaaaccttc
tggcacaggattaagctctatgctcagcgcgccggtattgccgtgcacctgtcaccccat
accctaagacatgcctttgctacccatctgctcaatcatggagcagacttgcgtgtggtg
cagctattgctgggccatagcgatctctcaaccacccaaatttacacccatgtggctaaa
gccagattggcgcagctgcatcaggcgcatcacccaagaggctag
DBGET
integrated database retrieval system
