Shewanella marisflavi: CFF01_04540
Help
Entry
CFF01_04540 CDS
T05400
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
smav03110
]
CFF01_04540 (clpB)
Chaperones and folding catalysts [BR:
smav03110
]
Heat shock proteins
HSP100
CFF01_04540 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_14
TniB
AAA_24
nSTAND3
NBD_SMAX1
bpMoxR
ATPase_2
AAA_7
AAA_18
IstB_IS21
DUF815
NACHT
AAA_25
AAA_19
ATP_bind_1
DNA_pol3_delta2
AAA_6
Motif
Other DBs
NCBI-ProteinID:
ASJ95917
UniProt:
A0AAC9XMF3
LinkDB
All DBs
Position
1029474..1032047
Genome browser
AA seq
857 aa
AA seq
DB search
MRLDRMTNKFQIAISDAQSLALGRDHQFIEPIHLMMALLNQDGGSIHPLLTQAGISVSTL
RSALSQELERLPQVEGTGGDVQLSQALIRLLNLCDKLAQKRKDKYISSELFVLAALEGGD
ALAQCLKKSGATKELLEKTIEEVRLGKNIDDPNAEDQRQALKKFTIDLTERAEQGKLDPV
IGRDDEIRRTIQVLQRRSKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGIKNKRVLSL
DLGALVAGAKYRGEFEERLKAVLNELAQEEGQVILFIDELHTMVGAGKSDGAMDAGNMLK
PALARGDLHCVGATTLDEYRQYIEKDAALERRFQKVLVDEPSVEDTIAILRGLKERYELH
HHVEITDPAIVAAASMSHRYVSDRKLPDKAIDLIDEAASSIRMQIDSKPEPLDRLERRTI
QLKLEEQALIKESDEASQRRLSTLRSELAEVEAKAAELNEVWHTEKAALAGTQHIKADLE
QARMDLEVARRAGDLTRMSELQYGRIPELEKQLDLAAQAEMQDMTLLRNKVSDVEIAEVL
SKATGIPVSKMLEGEREKLLHMEEALHTRVIGQNEAVDAVANAIRRSRAGLADPNRPIGS
FLFLGPTGVGKTELCKSLAKFLFDTEAAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGG
YLTEAVRRKPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDVIQERFGIATYAEMKAEVMNVVTHSFRPEFLNRIDESVVFHPLESEHIAHIAQIQID
SLKARLAEKDFELEVSEAALALIAQAGFDPVYGARPLKRALQQEVENPLAQKLLSGQLLP
GTPIKVDAAGGELSFHQ
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgcgactcgatcgtatgacgaacaaattccagatagcaatctccgatgctcagtcatta
gcgttggggcgtgaccatcagtttattgagccgattcatttgatgatggccctgctcaat
caggatgggggctctattcatccacttctgacccaggcggggatctcggtaagcaccttg
cgctcggcgctgagtcaggagcttgaacgcctgccacaggtagagggaaccggtggtgat
gttcagctgtctcaggcgctcattcgcctgctgaatctgtgtgacaaattggcacaaaag
cgcaaagataaatatatctccagcgagctgtttgtgttggcggccctagagggcggcgac
gcgctggcccagtgtttgaagaaatctggcgccaccaaggagttgcttgagaagaccatt
gaagaggtgcgtttgggtaaaaacattgacgatcctaacgccgaagatcagcgtcaggcg
ctgaaaaaatttaccatagatctgaccgagcgcgctgagcagggcaaattagatcctgtg
atcggccgtgacgatgagattcgccgaaccattcaggtgctgcaacgccgcagcaagaat
aaccctgtgctcataggtgagcccggtgtcggtaagacagctatcgtcgaaggcttggca
cagcgtatcatcaatggcgaggtgcccgaggggattaagaacaagcgggtactgtcgctt
gacttaggtgcattggtggcaggtgccaagtatcgtggtgagtttgaggagcgcctcaag
gcggtgcttaatgaattagcgcaggaagaggggcaggtgatcctctttatcgacgagctg
catactatggtgggcgcaggtaagagtgacggtgccatggacgcgggcaatatgcttaag
cctgcattggccagaggcgatctgcactgtgttggcgcgaccacactcgatgagtatcgc
caatatattgagaaagacgccgcgctcgagcgacgttttcagaaggtgctggtggatgag
ccgagtgtcgaagacaccatcgccatcttacgcggcctgaaagagcgctacgagctgcac
catcatgtggagatcacagatcccgcgattgtggcggcggccagtatgtctcatcgctat
gtctcagaccggaagttgcccgataaggctattgatctaatcgatgaggcggcctcgagt
atacgtatgcagatagactctaagccagagccgctggacagactagagcgtcgcaccatt
cagctaaagctggaggagcaagccttgatcaaagagagcgacgaggccagtcaacgccgt
ttgagtactctgcgtagcgagctggctgaggtcgaggccaaggccgccgaacttaatgaa
gtttggcatactgagaaggctgcattggcgggcactcagcatataaaggcggatctagag
caggcgcgtatggatcttgaggtggcgaggcgcgcaggggatctgacccgcatgtctgag
ctgcaatatggccgtatcccagagcttgagaagcaattggacttggctgctcaggccgag
atgcaggatatgacgctgctgcgtaacaaggtctctgatgtcgagatcgccgaggtgtta
tctaaggccacaggtattcctgtgtctaagatgctcgaaggggaaagagagaagctctta
cacatggaagaggcgttgcatacacgggtgatagggcaaaatgaggctgtagatgcggtg
gctaatgcgattcgacgtagccgagcgggtcttgccgaccctaatcgtccaattggctcg
ttcctcttcctcggccctacgggtgtgggtaagactgagctatgtaaatcgctggcgaag
tttctgtttgataccgaagcggccatggtacgtatcgacatgtccgaatttatggagaag
cattcggtgtcacgtctggttggtgcgcctccaggctatgttggctatgaagagggtggt
tatctgaccgaagcggtaagacgtaagccttactcggtgatcctgctcgatgaggtggaa
aaggcacatcccgatgtgttcaacattctgctgcaggtgctggatgatggtcgtttgacc
gatggtcaaggacgcacggtcgattttcgcaataccgtggtgattatgacctctaactta
ggttcggatgtgatccaagagcgttttggtatcgcgacttacgccgagatgaaagccgag
gtgatgaatgtggtcacccatagcttcaggcctgagtttttaaaccgtatcgacgagagt
gttgtgttccatccattggagtcagaacatattgctcatatcgctcagatacagatagat
agcctgaaagctagactggcagagaaagattttgagctcgaggtgagtgaagctgcctta
gccttaatcgcccaggccggatttgaccctgtttatggtgcgcgtccgctaaaacgtgcc
ctgcagcaagaggtcgaaaatccgttggcgcaaaaactgctcagtggtcagttgctcccg
ggcacacctattaaggtggacgccgctggtggtgagttatccttccatcagtaa
DBGET
integrated database retrieval system
