Shewanella marisflavi: CFF01_04745
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Entry
CFF01_04745 CDS
T05400
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
smav
Shewanella marisflavi
Pathway
smav00550
Peptidoglycan biosynthesis
smav01100
Metabolic pathways
smav01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFF01_04745 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CFF01_04745 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
smav01011
]
CFF01_04745 (mrdA)
Enzymes [BR:
smav01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CFF01_04745 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
smav01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CFF01_04745 (mrdA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
EFG_C
Motif
Other DBs
NCBI-ProteinID:
ASJ95951
UniProt:
A0AAC9TXL6
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Position
complement(1069920..1071803)
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AA seq
627 aa
AA seq
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MAPRKRMAMHDHAAEASLFKRRAIFTFGCVVVLLSILLTNLYHLQILSYKDYETRSNDNR
IRVVPVAPSRGLIYDRHGQLLAENQPFYSLELIPEKVKDIPATLDALSEVIAISKDERES
LLSSLKFHRRFKPITVKNRLSENEVAIFSVNQHRFPGFSVDAGLKRHYPYDGLLTHVLGY
VGRINNRDQAALQSNGQWPNYAATKDIGKQGIEKFYETLLHGMPGHLEEEVNNRGRTIRT
LKSVAPEPGQDIYLTLDLQLQKKAMELLAGRRGSIVAMDPRDGGILAMVSSPTYDPNQFV
HGISSKAYSDLLNARSRPLINRATQGQYAPASTVKPHMALLGLEDKAVTPKTRVWDPGFW
QIPGVERKYRDWKRWGHGWVDVNGALVHSCDTYFYDLAYKTGIDKISNFMQQFGFGERTG
VDIFEESAGNMPSKDWKRLKYNQPWYIGDTISVGIGQGYWTTTPLQLANATAIMANKGER
FVPHLLKSIKNDTVKVDTPVDRMPPVELKNPNNWDIINEAMKDTAHKSRFVDAGYTAAMK
TGTAQVFSVAEDEKYDAETIDEHLRDNALIVAYAPYEAPRIVLAVVLENAGWGGANAGPV
ARALLDEYILRDNLPIETAGSPHNERP
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
ttggcgccacgcaaacggatggccatgcacgaccatgctgccgaagcctcgctattcaaa
cgccgggctatctttacctttggttgtgtggtggtgctactgagcatattgctcaccaac
ctatatcatctgcagatcctgtcgtataaagattatgagacccgttccaacgacaaccgt
attcgcgtcgttcctgtggcgcccagtcgtggtctgatctatgacagacatggccagcta
ctggccgagaaccagcctttctattcgcttgagttgatccctgaaaaggttaaagacatt
cccgccaccttagatgccttgagcgaagttatcgccatcagcaaagatgagcgggaaagc
ctattgtcgtcactcaaattccatcgccgcttcaaaccgatcacggtgaaaaaccgtcta
tcggaaaatgaagttgccatatttagtgtcaatcaacacaggttccctggcttctctgtc
gatgccggccttaagcgtcactacccttacgatggtcttttaacccacgtactgggttat
gtcggccgcatcaacaaccgagatcaggcggcgctacagagtaatggccagtggccaaac
tatgcagccaccaaggatatcggcaagcaaggcattgaaaaattttatgaaaccttactt
catggcatgcctgggcatcttgaagaagaggtcaacaaccgcggcagaaccattcgcacc
ctcaagtcggtagcaccagagccgggacaggatatctacctgacattggatctccagttg
caaaagaaggcaatggaactccttgccggacgcagaggctccatcgtggccatggatccg
cgcgatggtggcatcctggccatggtatctagccccacttacgaccccaaccagttcgtt
cacggcatcagctctaaggcctatagcgatctgcttaatgcacgctcacgcccactgatc
aaccgcgcgacccaagggcaatatgccccggcatcaacggtcaaacctcatatggcactg
ctgggcctggaagataaggcggtaacccctaaaactcgggtctgggatcctggcttttgg
cagatccccggcgtagaacgcaaataccgcgactggaaacgctggggtcatggctgggtc
gatgttaacggcgccttggtgcattcctgcgacacctatttctatgatctggcctacaag
acaggtatagacaagatcagtaacttcatgcagcagtttggctttggcgagcgaacaggg
gtcgatatctttgaagaatcggccggtaatatgccctctaaggattggaagcgtctcaag
tacaatcaaccttggtatatcggcgacactatctctgtgggaattggccagggatactgg
accaccacgccactgcaactggccaacgctaccgccatcatggccaataagggtgagcgt
tttgtgccgcacctgctgaaatcgatcaaaaacgataccgttaaggtcgacacgccggta
gataggatgccgcccgttgaactgaaaaaccccaataactgggatatcatcaacgaggcg
atgaaagataccgcccacaagtcacgatttgtggatgccggatatacggcagccatgaag
acaggtaccgcccaggtatttagcgtggcggaagatgagaagtatgacgccgaaaccatc
gatgagcatttaagagataacgccctaattgttgcctacgccccctatgaggcgccgcgt
atcgtgctagccgtggtgttggaaaacgccggttggggcggcgcaaacgcaggccctgtc
gcccgcgccctgttagatgaatatatcctacgcgataacctgcccatagaaaccgccggg
agccctcacaatgaacgcccatag
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