Shewanella marisflavi: CFF01_05365
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Entry
CFF01_05365 CDS
T05400
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smav03400
]
CFF01_05365
DNA repair and recombination proteins [BR:
smav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CFF01_05365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
DnaB_C
Lon_C
AAA_22
SLFN-g3_helicase
nSTAND3
AAA_18
Rad51
AAA_19
CobU
AAA_14
NPHP3_N
AAA
AAA_30
AAA_11
cobW
AAA_16
Zeta_toxin
ABC_tran
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ASJ96052
UniProt:
A0AAC9XMK8
LinkDB
All DBs
Position
1195107..1196480
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AA seq
457 aa
AA seq
DB search
MAKNKTAYVCSECGQDFPRWQGQCNACGEWNTITEVRLAPAKSNSSSVAGYAGAVGGGSK
KLSEVEEFEAKKLLTGIGELDRVLCGGLTTGSVNIISGDPGAGKTTILSDLVSRMSQLMP
SLYCTAEESLSQFKNRVNRLKLQCNEDNLYLMAETNVEAIIAELEAKQVKFAVIDSIQAV
VTDLANGSPGSPSQVKGSAQALTQYCKQNNVTMFLVAHVNKNNETAGPQTLIHIVDCLTH
LECNDGQVRTLRANKNRFGDVDTVGIFRMTERGMISVDNPSEIFLSGSTTESPGAAITCI
RKGNRNLLLEIQCLTTEVEGEFPQRVCVGLNMNRIKMLTGILRKHTRTKIYHDTYFNLVG
GLKIDESETCIDLALVTALLSSLNEFVVPRTTCIMGELSLNGDVRPIDSGVPRVKEAVQH
GFTEIFIPYRNYHKSMEGLGAKINPIKTIHELLELIS
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaacaaaacagcatacgtgtgcagtgaatgtggtcaggactttccccgttgg
caggggcaatgtaatgcctgcggcgaatggaacaccatcaccgaagtgcgcctggcaccg
gccaagtccaatagcagttccgttgccggttacgcgggagcggtaggcggtggctctaag
aaactcagtgaagtggaggagtttgaggccaagaaactgctcaccggcatcggcgaactg
gatcgtgtgttgtgcggcggcctcactacaggttcggttaatattatctctggcgatcct
ggcgccggtaagaccaccatcttgtcggatctggtgtcacgtatgtcgcagctcatgcca
tcgctttactgtaccgctgaagagtctttatcgcagtttaagaaccgggttaaccgcctc
aagttgcaatgtaacgaagataatctttacttgatggctgagaccaatgtggaagccatc
attgccgagctggaagccaaacaggttaagtttgcggtgatcgactcgattcaggccgta
gtgaccgacttggccaacggcagcccaggatcgccgtctcaggtcaaaggcagtgcccag
gcgctcacccaatactgtaagcaaaacaatgtcaccatgttcctggtggcccacgttaac
aagaacaatgaaaccgccggcccgcagacccttattcatatcgtcgactgcctaacccat
cttgagtgtaacgatggtcaggtgcgtaccctgagggcgaacaagaaccgttttggcgac
gtggataccgtggggatcttcaggatgacagagcggggcatgataagtgtcgataatccc
agcgagatcttcttatctggttccaccacagaatcacccggcgcggcgatcacttgtatt
cgtaagggcaatcgaaatttactgctggagatccagtgcctgactactgaggtggaaggg
gagtttccccagcgggtgtgtgtgggtctcaatatgaatcggatcaagatgcttaccggc
atattgcgcaagcatacccgcaccaagatctatcacgatacctattttaacttggtcggc
gggctcaagattgatgagtcggagacctgcatcgacctggccttggtgacagccctgctg
agcagcttgaacgagtttgtggtgcccagaaccacctgcatcatgggtgagctgagcctc
aatggcgatgtccgccctatcgacagcggcgtgcccagagtcaaagaggcggtgcagcat
ggctttaccgagatctttattccctatcgtaactatcataaatcgatggaagggctaggc
gccaagattaatcctattaagacaatccacgagctgctagagctgattagttag
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