Shewanella marisflavi: CFF01_05985
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Entry
CFF01_05985 CDS
T05400
Name
(GenBank) beta-ketoacyl synthase
Organism
smav
Shewanella marisflavi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PP-binding
ketoacyl-synt
Ketoacyl-synt_C
KR
Acyl_transf_1
FlaEY_3rd
PS-DH
KAsynt_C_assoc
PKS_DH_N
adh_short
adh_short_C2
ApeI-like
IMCp
Motif
Other DBs
NCBI-ProteinID:
ASJ96168
LinkDB
All DBs
Position
complement(1347842..1355698)
Genome browser
AA seq
2618 aa
AA seq
DB search
MSQTDTTSSTHSEDKRLNKRLKDMPVAIVGMASIFANSRYLNKFWDIICDKIDAITEVPD
THWQAEDYYDADKSTPDKSYCKRGGFMPEVNFNPMEFGLPPNILELTDTSQLLSLIVAKE
VLADANLPGDYDRNKIGITLGVGGGQKISHSLNARLQYPVLKKVFKHSGISDADSEMLIK
KFQDQYIHWEENSFPGSLGNVIAGRIANRFDLGGMNCVVDAACAGSLAAMRMALSELVEG
RSEMMITGGVCTDNSPSMYMSFSKTPAFTTNETIQPFDVDSKGMMIGEGIGMVALKRLED
AERDGDRIYAVIKGVGASSDGKFKSIYAPRPEGQAKALKRAYDDAGFAPHTLGLVEAHGT
GTAAGDVAEFNGLTSVFSEGCDSKQHIALGSVKSQIGHTKSTAGTAGLIKAALALHHKVL
PPTINVNLPNPKLNIEQSPFYLNTETRPWLPRPDGTPRRAGISSFGFGGTNFHFVLEEYQ
SEHSRDQGKLTQFRQRAVPQSLLISGADKADLLKNLRQLLTANASESLEILAKQHPLRAL
TADAPRLGLVARDRDELNKLLSQAEAKLQGDDQAQWSLPGGVYYRRAAPTEAKVAALFAG
QGAQYLNMGLELACHFPEMREQFVLADKVFASQDKTPLSQLVYPVPVFTTEERKAQEALL
TNTANAQSAIGAISMGQYALLSAAGFEADMLAGHSFGELSALCASGVISLEDYYQLTFAR
GDAMASQSAEGADRGAMYAIITKTAEDLTRLESTLTAFEGVKVANYNAPTQLVIAGPTQA
TAQAASALSELGFKAIALPVSGAFHTPLVGHAQAPFAKAIDKVKFTKPQRPVYANASGGR
YANIAKTIKSEFKQHMLQSVRFSEQLKAMYDDGARIFVEFGPKNILQKLVEGTLSEQLDS
ISTISLNPNPKGDSDLQLRQAAIQLAVNGIALEQLDPYCAEPAPIEPASPMNITLNATNY
ISPATKAKMEKSLHAGTISSNTLIEEKIVEVEKLVEVEKIVEVEKIVEKSVPAQQVSPAQ
TAIESHTQASSQLQAGNGDALSQFFAAQQQTAQLHQQFLAIPQQYGDTFTQLMTAQAQMA
AAGVAIPESLQRSMEQFHQHQAQTLQSHTQFLELQAQSHQSALSLLSQGAVAEQASTPSQ
VAFTPASTSAPTPVKATVPPAAPAVTPVPQVQATVNPPVATPAKVQQTVQPIAPQPMAPA
QSPAIEPVSMAPSVNLGSEQVQQTMLNVVADKTGYPTEMLALEMDMEADLGIDSIKRVEI
LGTVQDELPNLPELSPEDLAECRTLGEIVDYMNSKLSAAGAPVQQTAAGSHSQQSSATIS
TQPSVQAQTSTAAVNGLSSSQVQQTMLNVVADKTGYPTEMLALEMDMEADLGIDSIKRVE
ILGTVQDELPGLPELSPEDLAECRTLGEIVAYMNSKLPAAGTHIQQASATPANDLSSSQV
QQTMLSVVADKTGYPTEMLALEMDMEADLGIDSIKRVEILGTVQDELPGLPDLSPEDLAE
CRTLGEIVSYMNSKLPAAGAHVQQAAAGAMTNQQPTAQTQAGLSSSQVQQTMLSVVADKT
GYPTEMLALEMDMEADLGIDSIKRVEILGTVQDELPGLPELNPEDLAECRTLGEIVSYMN
SKLPAAGAHVQQAAAGAMTSQQPTAQTQAGLSSSQVQQTMLSVVADKTGYPTEMLALEMD
MEADLGIDSIKRVEILGTVQDELPGLPDLNPEDLAECRTLGEIVAYMNSKLPAAGDHGQQ
AAAGAMAETTGKQEESATINQVQAISAEPLVELPPHSEVALKKLEAAKPDAEGFAANATL
VIQDDGHNAGVLAEKLSNKGLNVVVVRLPQGMPQSPLSSAVSSVQPKGLSEADIQESMAE
ILAEHGAIKGFVHLQPMADSEATPALSLTETGFNHLSSAFLWAKHLHGQLSQQTGRRCFF
SVSRIDGGFGYLSPELLAKSELNQAALSGLTKTLSHEWPEVFCRALDLAPTMSAAQLGDA
IVAELFDAQTQLSEVGISVDTDGQLSRHALQPGQAAIHTQAANLDSTDKILVTGGAKGVT
FECALALAKRCQSHFILAGRSQHLSAAERPSWAQGKSVDQLKQAAIAHIMASGDKPTPKQ
IDALIWPIKSSLEIDAALKAFEAVGASAEYLAMDVTNSESITHALGIITQISPITGLIHG
AGVLADKHIQDKQLDELARVYGTKVRGLQALLSVLDMTQLKLVALFSSAAGFYGNTGQSD
YAMANEILNKAALQLTQLNEQTKVMSFNWGPWDGGMVNPALKKMFVERGVYVIPLQAGAE
LFATKLLSPSGAQLLVGSDMQGNTAKADEASSVKKPDADEVHVAQHPLPPVTLTRQLTPA
TMAFVSDHVIGGNPVLPTVCAIQWMREAARAHIGAPVKVRSYKLLKGIIFDTEAPQTLVL
TLTPEYKGDSLTAIQASISSEGRPQYQASLCLMDSEDSSAPIKAFEGQYNNEAVTDASTL
YSDGTLFHGPRLQGLDKVLKFDEQGLIASVSLPQVREADCGEFIPSLSSAGCQPFAEDLL
LQAMLVWARLSYGAASLPSAIDEFISVQPMHGGETGYIELNVVKSNRRSLTADVALYHQD
GRLSALMKGARITISSTLNAAFVPHGARGETANEEATQ
NT seq
7857 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaaccgatacaacaagctcgacgcacagcgaagacaagcgactcaataagcgt
ctaaaagatatgcccgttgccattgttggcatggccagcatctttgccaactcgcgctat
ctcaacaagttttgggatattatctgcgacaagatagatgccattaccgaggtgccggac
acccactggcaggcagaagattactatgatgccgacaaatccacgcccgataagagctac
tgtaagcgtggcggtttcatgcctgaggttaacttcaaccctatggagtttggtctgccg
cccaacattttggagctcaccgacacctcgcagctgttgtccctcattgtggccaaagag
gtgctcgccgacgctaatctgcctggcgactatgacagaaacaagataggtatcacctta
ggggtgggcggtggtcagaagatcagccacagcctcaatgccagattgcaatatcctgtg
ctcaaaaaggtgtttaaacacagcggcatcagcgacgccgacagcgagatgctgatcaag
aagttccaggatcaatatatccactgggaagaaaactctttccccggctctctgggtaat
gtgatcgccggacgtatcgctaaccgctttgacttaggcggcatgaactgcgtagtcgac
gctgcctgcgccggctctctggccgccatgcgtatggcgctcagcgaactcgtagaaggc
cgctctgagatgatgatcaccggcggcgtctgcacagataactcaccctctatgtacatg
agtttctccaagaccccagcctttaccaccaacgaaacgatacaaccatttgatgtcgat
tcaaaagggatgatgataggcgaagggattggcatggtggcgcttaagcgtctggaagat
gccgagcgcgatggcgatcgcatctatgcggtgatcaaaggcgttggcgcctcatcggac
ggcaagtttaaatctatctatgcaccgcgcccagaaggccaggccaaggcactgaaacgc
gcctatgatgatgcgggatttgcgccgcacactctcggccttgtcgaggctcacggcact
ggtaccgccgctggcgatgtggccgaatttaacggcctgacctctgtgtttagcgaaggc
tgcgacagcaaacaacatattgccctggggtcggtgaaatctcagataggtcacactaag
tccaccgcgggtaccgctggccttatcaaggcggcgctggcgctacaccacaaggtgtta
ccgcccactatcaatgtgaatctgcctaaccctaagctaaatattgagcagtcgcccttc
tacctcaataccgagacccgcccttggctgccgcgtcccgatggcacgccacgccgcgcc
gggatcagctctttcggttttggtggcaccaacttccactttgtgctcgaagagtaccag
agcgaacatagccgagatcagggcaagctgacccaattccgccagcgcgccgtgcctcaa
agcttactgatcagcggcgccgataaggctgacctgctcaaaaacctgcgccagttgtta
acggcaaacgcaagtgagtctctggaaatcctggccaagcaacacccgctgcgcgccctg
acggccgatgcgccgcgactgggtctggttgcacgagacagagatgaactcaataaacta
ttgagtcaggccgaggccaaattacaaggcgatgaccaggcacaatggtcactaccggga
ggcgtatattaccgccgcgccgcgccaacagaggctaaggttgccgccctgtttgccggt
caaggcgcccaatacctcaatatggggcttgagcttgcctgccacttccctgagatgcgc
gagcaatttgtactggccgacaaggtgtttgccagccaggataagacgccgttgtcgcaa
ctggtgtacccggtgccagtcttcacgactgaggagcgcaaggcacaagaggcactactg
accaataccgctaatgcccagagcgccatcggcgccatctccatggggcaatatgctctg
ctgagcgccgcgggctttgaagccgatatgcttgccggtcatagctttggtgaacttagc
gccctgtgcgctagcggcgtgatcagcctggaagactactaccagctgacatttgcccgt
ggcgatgccatggccagccaaagtgccgagggtgccgatcgcggtgccatgtatgccatc
atcaccaaaaccgccgaagatctgactcgactggaatcaacccttaccgcctttgagggg
gttaaggtcgccaactacaacgcaccgactcaactggtcatcgcaggtccaacccaggcc
acggcacaagctgccagcgccctgagcgaactcggctttaaagcaattgccctgccagtt
tccggcgctttccacaccccactcgtgggccatgcacaggcaccttttgccaaggcgatc
gataaggtgaagtttactaagccgcagcgccctgtgtatgccaatgccagcggtggtcgc
tatgccaatatcgccaagaccatcaagagtgagtttaagcagcacatgctgcaatcggtg
cgctttagcgagcagttaaaggcgatgtatgacgatggcgcgcggatatttgtcgaattt
ggccctaagaatattctgcaaaaattggtcgagggtaccttgagcgagcagcttgactcc
attagtaccatcagcctaaaccctaaccctaagggcgacagcgacctgcaacttcgccag
gcggcgattcagctggccgtcaacggcatagcgctcgagcaactggatccctattgcgcc
gagccggcgccgattgagccagcatcgccaatgaacatcaccctcaacgcgaccaactat
attagtccggcgaccaaagccaagatggaaaagtcactccatgcaggcactatttcttcc
aataccctgatcgaagaaaagatcgtggaagtggaaaaactggtcgaagttgaaaaaatt
gtagaagtagagaagatagtggaaaaatcagtcccagcacagcaggtatctccggctcaa
acagccatcgagagccacacccaagcaagcagtcagctacaagcaggcaatggcgatgcc
ctgagccaattcttcgcggcgcagcaacaaacggcccagctgcatcagcagttcctcgcc
attcctcagcaatatggtgacaccttcactcagctgatgacggcgcaagctcaaatggcc
gccgcaggtgtggcgatccctgagagtctgcaacgttcaatggagcagttccaccaacac
caggcccagacactacagagccatacccagttccttgagctgcaagcccaaagccatcaa
agcgccttaagcctgctcagccaaggagctgtggctgagcaggcgagcacgcctagccag
gttgcattcacgccagcatcgacttcggcgccaaccccagtaaaagccactgtgccgccg
gccgcgccagcagttacgccagtacctcaggtacaagcgacggttaatccgccagtggct
acacctgctaaagtgcagcaaactgtgcagcctatcgcccctcaaccaatggcacctgcg
caatcacctgccattgagccagtgagcatggcgccaagtgttaatctgggcagtgaacag
gtgcagcagaccatgctaaacgttgtagccgataaaaccggttacccaaccgagatgctg
gcccttgagatggacatggaagccgaccttggcatcgattctatcaagcgggtggagatc
ttaggcacagtacaagatgagctgccaaacctacccgaactcagcccagaggatctggcc
gagtgccgcaccctgggtgaaatcgtcgactatatgaacagtaaactgtccgccgcaggc
gctcctgttcaacaaaccgccgcaggttctcatagtcaacaatcgagcgctacgattagc
acgcagccatcagtacaagctcaaacaagcaccgcagcagtcaacggcctttcatcttca
caggtgcagcagaccatgctgaacgtggtggccgataagactggttacccaaccgagatg
ttggcccttgagatggatatggaagccgaccttggcatcgattctatcaagcgggtggag
atcttaggcacagtacaagatgagctgccaggactgcctgaactcagcccagaagatctg
gccgagtgtcgtaccctgggtgagatcgtcgcctacatgaacagcaagctgccagctgca
ggtacccatattcaacaagcaagcgctacgcctgctaatgacttgtcatcatcacaggtg
cagcagaccatgctgagcgtggtggccgataagacaggttacccaaccgagatgctggcc
cttgagatggacatggaagccgaccttggtatcgattctatcaagcgggtggagatctta
ggcacagtgcaggatgagctgccaggattgccagacctcagcccggaagatctggccgag
tgccgtaccctgggtgaaattgttagctatatgaacagcaagctgcccgctgcaggcgct
catgttcaacaagccgccgcaggcgctatgaccaaccaacaaccgacagcacaaactcaa
gctggcttgtcatcatcacaggtgcagcagaccatgttgagcgtggtagctgataaaaca
ggttacccgactgagatgctggccctcgagatggatatggaagccgacctaggcatcgac
tctatcaagcgggtcgagatcttaggcacagttcaagacgaactgccgggactaccggag
ctcaacccagaagatctggccgagtgtcgcaccctaggtgaaattgttagctatatgaac
agcaagctgccagctgcaggcgctcatgttcaacaagccgccgcgggcgctatgaccagc
caacagccgacagcacaaactcaagctggcttatcatcatcacaggtgcagcagaccatg
ctgagcgtggtggccgacaagacaggttacccaactgaaatgctggcccttgagatggat
atggaagccgacctaggcatcgactcaattaaacgggtcgagatcttaggcacagttcag
gatgagctaccgggactaccggatctcaacccagaagatctggccgagtgccgcactctg
ggtgaaatcgtcgcttacatgaacagcaagctgcccgccgcgggcgatcatggccaacaa
gccgccgcgggcgctatggcagaaacgacaggcaagcaagaggagagcgccacgattaac
caggtgcaagccatctccgccgaacctttagtcgagttaccgcctcacagcgaggtggcg
ctaaaaaagcttgaagcggcgaagcctgatgccgagggtttcgccgccaatgctaccctg
gtgatccaagatgatggtcacaatgccggggtactggccgagaaactcagcaacaaaggg
ctcaatgtcgtggtggtgcgacttcctcaggggatgccacagtcaccgctaagcagcgcc
gtgtctagcgtgcagccaaaagggttaagcgaagccgacattcaggagagcatggctgag
atcctagccgagcatggcgctatcaaaggctttgttcacctgcagcccatggctgacagt
gaggccacgccagcgctttcgctaaccgagacagggtttaaccatctcagctcagccttc
ctgtgggctaagcacctgcatggtcaactgagtcaacaaactggacgccgctgtttcttc
agcgtcagccgtatcgatggcggtttcggctacctgtcacctgaactgctggccaagagt
gagctcaatcaggctgcactgtcgggcctgactaagacactaagccacgagtggcctgag
gtgttctgccgcgcgctggatctcgccccaacgatgagcgccgctcagctgggcgatgcc
atagtggctgagttattcgatgcacagacccagcttagcgaggtgggtatcagtgtcgat
accgacggacaattgtcccgccacgctttacagccagggcaggcagcgatacacacccaa
gccgccaacctagacagtacagataaaatactggtgaccgggggtgcaaaaggggtgacc
ttcgaatgcgccttagcgctggccaagcgttgtcagtcgcactttatcctcgcaggtcgc
agccaacatctctcggcggcagaaagaccaagctgggcacaaggtaagtctgtcgatcaa
ctcaagcaggctgctatcgcccatattatggctagcggtgacaagccaacgcctaagcag
atagatgccttaatctggccgatcaagagcagccttgagattgacgccgccctgaaagcc
ttcgaggcggtaggtgcatcggccgaatatctcgccatggatgtgaccaacagcgagtct
atcacccatgcgctggggatcatcacccagataagccctatcacaggccttatccacggc
gccggtgtattggccgataaacatattcaagacaagcagctcgacgagctagcgcgtgtt
tatggcactaaggttagaggcttacaagctctgctctctgtacttgatatgacacagctt
aaactggttgccctcttctcttcggcggcgggtttctatggcaacacaggccagagtgac
tacgccatggcgaacgagatcctcaacaaggcggcactgcaactgactcagttaaacgag
cagaccaaggtgatgagctttaactggggcccttgggatggcggcatggtcaatcctgcg
ctgaagaagatgtttgtcgagcgcggcgtctatgtgatcccactgcaggcgggtgccgag
ctgtttgccaccaagttgctaagcccaagtggcgcgcagctgctggtaggcagtgatatg
caaggcaacacagctaaagccgatgaggcaagctcagtaaaaaagcctgatgcggatgag
gtgcacgtcgcacagcatccgctgccgcctgtcaccttaacgcgccagttaacgcccgcg
accatggcctttgtctcagaccatgtgatcggcggtaacccggtattaccgacggtttgt
gctatccaatggatgcgtgaagccgctcgggcgcacattggcgccccggtaaaggtgcgc
agctataagctgctcaaaggcattattttcgacaccgaagcgccgcaaaccttagtgctt
acgctaaccccagaatataagggcgatagcctgacggccattcaggcctcaataagcagc
gagggacggccgcagtaccaggcgagcctttgtttgatggatagcgaggacagctcggcg
ccaatcaaggccttcgaggggcagtacaataacgaggcggtcaccgatgccagcacgctc
tacagtgacggcaccctgtttcatgggccaagactgcagggattagataaggtacttaag
ttcgatgagcagggccttatcgcctctgttagcctgccccaggtgcgcgaagccgactgc
ggcgagtttatacctagcctaagcagcgcaggctgtcagccttttgctgaggatctcttg
ctccaagccatgttggtctgggcaaggctcagctatggggcggccagtttgccatcggcc
atcgacgagttcatcagtgtgcagccgatgcacggcggcgaaaccggctatatcgagctg
aacgtggtcaagagcaatcgcagaagcctgacggccgatgtggcgctttaccatcaagat
ggccgcctgagcgccctgatgaaaggggccaggatcaccataagctcaaccctcaatgcc
gctttcgtgccacacggcgcgcgcggtgaaacggccaacgaggaggcgacgcagtga
DBGET
integrated database retrieval system