Shewanella marisflavi: CFF01_06270
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Entry
CFF01_06270 CDS
T05400
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
smav
Shewanella marisflavi
Pathway
smav00061
Fatty acid biosynthesis
smav00071
Fatty acid degradation
smav01100
Metabolic pathways
smav01212
Fatty acid metabolism
smav02024
Quorum sensing
smav04146
Peroxisome
Module
smav_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CFF01_06270
00071 Fatty acid degradation
CFF01_06270
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CFF01_06270
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFF01_06270
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
smav01004
]
CFF01_06270
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
smav04147
]
CFF01_06270
Enzymes [BR:
smav01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CFF01_06270
Lipid biosynthesis proteins [BR:
smav01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CFF01_06270
Exosome [BR:
smav04147
]
Exosomal proteins
Exosomal proteins of breast milk
CFF01_06270
Exosomal proteins of breast cancer cells
CFF01_06270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ASJ96219
UniProt:
A0AAC9XN30
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All DBs
Position
1416382..1418349
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AA seq
655 aa
AA seq
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MTQVNNASTARAFDMGDLDTFPKILRHNAANWGKEVAMREKEFGIWTEFSWQDYHNRVKW
MALAFDHLGIKAESTIALLGENRPEWVWGEVAAHALACFSLGIYQDSLHEEVAYLLNRSE
AQVIVAEDEEQCDKLLELGDSIPSVKYIVYCDPRGMRKYDDPRLISVEEIYRLGQEVDNT
QPRHYDNLVDAGKAENIAIYCTTSGTTSKPKIVLLQGSKFIDHCCSYLRADPRAPGDNYV
SVLPLPWIMEQVYAVGQALIARQIVNFVEEQETMMADLREIGPSFVLLAPRVWEGILADV
KARMMDSTPLKQKLFDFAMKRAEQRLADGGRSKLADILLMKALRDRLGFSFLKSAATGGA
AMGPDTFKFFQAIGVPLRQLYGQTEMCGAYTIHEEHDVDYDTVGVAFDTAELKVINTDSE
GVGEVIAKTVGMFNGYLGDQAAYDEDVKDGWMHTGDAGYFKPSGHLVVIDRIKDLAKTSQ
GIQYSPQYIENKLKFSSFIGEAVILGKDKPYLSAILCIRFSIVSKWAEQQGLAFTNYTNL
SSLPEVYEQLQAEVERVNETLPDAQKINKFILLYKELDADDGELTRTRKVRRGVIADKYG
EIIEAIYDDQSHVDIDTVITFQDGTKSRIKTQVKVATVIAPSQPIEGEASQRRAS
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggtaaataatgcgtcgacggcgcgggccttcgacatgggcgatctcgatacc
tttcccaagatcttacgccacaatgcggccaattggggtaaagaggtggccatgcgcgag
aaggagttcggcatctggaccgaattcagctggcaagattatcacaaccgggtgaagtgg
atggcgctggccttcgatcatctgggcatcaaagccgagagcaccatagccctgctcggc
gagaatcgccccgagtgggtctggggcgaggtggccgcccatgcgctggcctgcttctca
ctggggatctatcaagattcgcttcacgaagaggtggcttatttgcttaaccgcagtgag
gctcaggtgattgtcgccgaagatgaggagcagtgcgataagctgctggagctgggcgac
agcatcccctcggtgaaatatatcgtctactgcgacccacgtggtatgcgcaagtatgac
gacccacgtctcatcagtgtcgaggagatctatcgcctcggccaggaagtggataacacc
cagccgcgccactacgacaacctggtcgatgcgggcaaggcggagaacatcgccatctac
tgcaccacttcgggcaccacttctaagcccaagattgtcttgctgcagggcagcaagttt
atcgaccactgctgctcttacctcagggccgatccgcgtgcgccgggcgacaactatgtc
tccgtgctgccgctaccctggatcatggagcaggtctacgccgttggccaggcgcttatc
gcccgtcagatcgtgaatttcgttgaagagcaggaaaccatgatggcggatctgcgcgag
ataggcccaagcttcgtcttgttagcgcctagagtgtgggaagggatcctcgccgatgtg
aaggcgcgcatgatggactcgaccccgctcaagcaaaaattgttcgactttgccatgaag
cgcgccgagcagcgacttgccgatggcgggcgttccaagcttgccgacatcctgctgatg
aaggcgctgcgcgatcgcttaggtttttccttcttaaaatcggcggccaccggcggcgcg
gctatggggcctgatacctttaagttcttccaggcgatcggcgtgccgctgcgtcaactt
tacggtcaaaccgagatgtgcggcgcctacaccatacatgaagagcatgatgtggattac
gacactgtgggggtggccttcgataccgccgagcttaaggtgatcaacaccgatagcgaa
ggagtgggtgaggtgattgccaagacggtaggcatgttcaacggctatctgggcgatcag
gccgcttatgacgaagacgtcaaagatggctggatgcacacgggggacgccggttacttc
aagccatcgggccatctggtggtgatcgatcgtatcaaagacttagccaagaccagccag
ggtattcagtactcgccgcaatatatcgaaaacaagctgaagttctcctcctttatcggt
gaggcagtgatcttaggtaaggataagccgtatttgtcggccatcctctgtatccgattc
agcatcgtctccaagtgggccgagcagcagggactggcctttaccaactacaccaatttg
tcgagtctgcccgaggtctatgagcagctacaggccgaggtggagcgggtaaacgagacc
ctgcctgatgcgcagaagatcaacaagtttatcttgctttacaaggagctggacgccgat
gacggcgagctgacccgtacccgtaaggtaagacgtggggtgattgccgacaagtatggc
gagatcatcgaagccatctatgacgaccagtcccatgtggatatcgacacagtgatcacc
ttccaggatggcactaagtcgcgcatcaaaacccaagttaaggtggcgacagtgatcgcg
ccaagccagcccatcgagggcgaggcgagtcaaaggagagcatcatga
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