Shewanella marisflavi: CFF01_07025
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Entry
CFF01_07025 CDS
T05400
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
smav
Shewanella marisflavi
Brite
KEGG Orthology (KO) [BR:
smav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
smav03400
]
CFF01_07025
DNA repair and recombination proteins [BR:
smav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFF01_07025
Archaeal homologous recombinant proteins
CFF01_07025
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ASJ96359
UniProt:
A0AAC9TZG3
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Position
1600454..1601593
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AA seq
379 aa
AA seq
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MKFIHTSDWHIGRQLHNQSLLDDQRHVLSQIVSLAKTHEVDALIVAGDIYDRSVPPANAV
ALLDEVLNELIALGIKVIMIAGNHDGHERLGFAARQMQSSGLHIVGPLTAEISPIHLGSV
SGDAVFYPLPYAEPATVRLQLDCQVSTHEEAMAELLAQVHQDDSQGLPKVVIAHCFLDGG
SESESERPLSIGGADKISPKLFEGFDYTALGHLHGPQYKGAEQIRYSGSILKYSFSEQHQ
NKSVTLVELAQGETSISLLPLEPLRDVRILEGALDELLAQGVKDPGREDYLMVRLLDKHA
ILDAMGKLRNVYPNVLHLERTGLMAANEQLAIASDHIKKGELEMFKDFFTQVSGEPMSEA
QLELITQTLDELHKGEEGR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccatacctcagactggcatatcggtcgtcagctgcataatcagagcctg
cttgatgatcagcgtcatgtgctttctcaaatcgtctcactcgctaagacccatgaggtc
gatgccctgattgtcgccggcgatatctatgaccgctccgtgccgcccgccaatgcggta
gccctgctcgatgaggtgctcaacgagctgattgccttgggaatcaaagtgatcatgatt
gcgggtaaccatgatggccatgagcgtctgggctttgcggcgcggcagatgcagagtagc
ggtctccatatcgtcggcccgctgacagctgagatcagcccaatccatttaggctcagtc
agcggtgatgccgtgttctatcctctgccttacgccgaacccgcgaccgtcaggctgcag
ttggattgtcaggtcagtactcatgaagaggcgatggccgagctgctggctcaggtgcat
caagatgacagtcagggactgcccaaggtggtgattgctcactgttttctcgatggtggt
agcgaatctgaatctgagcgtcccctgagcatagggggggcggataagatctctcccaaa
ctcttcgagggatttgactataccgccctggggcatctgcacggcccacaatataagggc
gctgagcagatacgttattcaggctccatcctcaaatactccttcagcgagcagcatcaa
aataagtcggtgactttagttgagcttgctcaaggtgagaccagtatcagtttgttaccc
cttgagccactgcgggatgtgcgcattctcgaaggggcgttggatgagttgttggcccaa
ggcgtcaaggatcccggtcgcgaggattatctgatggtgaggctactggacaagcacgcc
atcttagatgccatgggcaagttgagaaatgtctatcctaacgtgctgcatctcgagcgt
accggactgatggcagctaacgagcaactggccattgcctcagatcatatcaagaagggt
gagcttgagatgtttaaagatttctttactcaggtatcgggcgagccgatgagtgaggcg
cagcttgagttaatcacccaaaccttggatgagctgcacaaaggggaggaaggcagatga
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